co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G28850

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0070212: protein poly-ADP-ribosylation	0.00E+00
2	GO:2001142: nicotinate transport	0.00E+00
3	GO:0002764: immune response-regulating signaling pathway	0.00E+00
4	GO:0032497: detection of lipopolysaccharide	0.00E+00
5	GO:2001143: N-methylnicotinate transport	0.00E+00
6	GO:0009626: plant-type hypersensitive response	2.65E-07
7	GO:0000187: activation of MAPK activity	9.63E-06
8	GO:0070588: calcium ion transmembrane transport	1.67E-05
9	GO:2000037: regulation of stomatal complex patterning	6.14E-05
10	GO:0010365: positive regulation of ethylene biosynthetic process	1.50E-04
11	GO:0051245: negative regulation of cellular defense response	1.50E-04
12	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	1.50E-04
13	GO:0010941: regulation of cell death	1.50E-04
14	GO:0010045: response to nickel cation	1.50E-04
15	GO:0019673: GDP-mannose metabolic process	1.50E-04
16	GO:0015784: GDP-mannose transport	1.50E-04
17	GO:0034975: protein folding in endoplasmic reticulum	1.50E-04
18	GO:0043069: negative regulation of programmed cell death	2.32E-04
19	GO:0010042: response to manganese ion	3.42E-04
20	GO:0002221: pattern recognition receptor signaling pathway	3.42E-04
21	GO:0010229: inflorescence development	3.54E-04
22	GO:0034605: cellular response to heat	4.00E-04
23	GO:0051091: positive regulation of sequence-specific DNA binding transcription factor activity	5.61E-04
24	GO:0010581: regulation of starch biosynthetic process	5.61E-04
25	GO:0002230: positive regulation of defense response to virus by host	5.61E-04
26	GO:0016045: detection of bacterium	5.61E-04
27	GO:0009062: fatty acid catabolic process	5.61E-04
28	GO:0010359: regulation of anion channel activity	5.61E-04
29	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	5.61E-04
30	GO:0051176: positive regulation of sulfur metabolic process	5.61E-04
31	GO:0015783: GDP-fucose transport	5.61E-04
32	GO:0009814: defense response, incompatible interaction	7.29E-04
33	GO:0016226: iron-sulfur cluster assembly	7.29E-04
34	GO:0006468: protein phosphorylation	7.37E-04
35	GO:0010227: floral organ abscission	7.93E-04
36	GO:0072334: UDP-galactose transmembrane transport	8.03E-04
37	GO:0010306: rhamnogalacturonan II biosynthetic process	8.03E-04
38	GO:0006612: protein targeting to membrane	8.03E-04
39	GO:0015696: ammonium transport	8.03E-04
40	GO:0046713: borate transport	8.03E-04
41	GO:0080167: response to karrikin	8.72E-04
42	GO:0010200: response to chitin	9.17E-04
43	GO:0046345: abscisic acid catabolic process	1.06E-03
44	GO:0072488: ammonium transmembrane transport	1.06E-03
45	GO:0010363: regulation of plant-type hypersensitive response	1.06E-03
46	GO:2000038: regulation of stomatal complex development	1.06E-03
47	GO:0080142: regulation of salicylic acid biosynthetic process	1.06E-03
48	GO:0002229: defense response to oomycetes	1.31E-03
49	GO:0045487: gibberellin catabolic process	1.35E-03
50	GO:1900425: negative regulation of defense response to bacterium	1.65E-03
51	GO:0051607: defense response to virus	1.78E-03
52	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	1.98E-03
53	GO:0046470: phosphatidylcholine metabolic process	2.33E-03
54	GO:1900056: negative regulation of leaf senescence	2.33E-03
55	GO:0070370: cellular heat acclimation	2.33E-03
56	GO:0010038: response to metal ion	2.33E-03
57	GO:0010161: red light signaling pathway	2.33E-03
58	GO:0008219: cell death	2.45E-03
59	GO:0007166: cell surface receptor signaling pathway	2.49E-03
60	GO:0042742: defense response to bacterium	2.84E-03
61	GO:0071482: cellular response to light stimulus	3.08E-03
62	GO:0048193: Golgi vesicle transport	3.08E-03
63	GO:0010204: defense response signaling pathway, resistance gene-independent	3.08E-03
64	GO:0090333: regulation of stomatal closure	3.49E-03
65	GO:0007064: mitotic sister chromatid cohesion	4.35E-03
66	GO:0009870: defense response signaling pathway, resistance gene-dependent	4.35E-03
67	GO:0000165: MAPK cascade	4.81E-03
68	GO:0046777: protein autophosphorylation	5.22E-03
69	GO:0009785: blue light signaling pathway	5.75E-03
70	GO:0009909: regulation of flower development	5.92E-03
71	GO:0002237: response to molecule of bacterial origin	6.25E-03
72	GO:0007034: vacuolar transport	6.25E-03
73	GO:0042343: indole glucosinolate metabolic process	6.77E-03
74	GO:0010053: root epidermal cell differentiation	6.77E-03
75	GO:0006071: glycerol metabolic process	7.30E-03
76	GO:0009863: salicylic acid mediated signaling pathway	7.84E-03
77	GO:0006487: protein N-linked glycosylation	7.84E-03
78	GO:0098542: defense response to other organism	8.97E-03
79	GO:0048278: vesicle docking	8.97E-03
80	GO:0031408: oxylipin biosynthetic process	8.97E-03
81	GO:0010017: red or far-red light signaling pathway	9.56E-03
82	GO:0071456: cellular response to hypoxia	9.56E-03
83	GO:0009686: gibberellin biosynthetic process	1.02E-02
84	GO:0001944: vasculature development	1.02E-02
85	GO:0070417: cellular response to cold	1.14E-02
86	GO:0042391: regulation of membrane potential	1.20E-02
87	GO:0000271: polysaccharide biosynthetic process	1.20E-02
88	GO:0000413: protein peptidyl-prolyl isomerization	1.20E-02
89	GO:0045489: pectin biosynthetic process	1.27E-02
90	GO:0071472: cellular response to salt stress	1.27E-02
91	GO:0048544: recognition of pollen	1.34E-02
92	GO:0061025: membrane fusion	1.34E-02
93	GO:0010193: response to ozone	1.47E-02
94	GO:0006891: intra-Golgi vesicle-mediated transport	1.47E-02
95	GO:0006635: fatty acid beta-oxidation	1.47E-02
96	GO:0006470: protein dephosphorylation	1.51E-02
97	GO:0016032: viral process	1.55E-02
98	GO:0030163: protein catabolic process	1.62E-02
99	GO:0009639: response to red or far red light	1.69E-02
100	GO:0006464: cellular protein modification process	1.69E-02
101	GO:0000910: cytokinesis	1.84E-02
102	GO:0009911: positive regulation of flower development	1.92E-02
103	GO:0001666: response to hypoxia	1.92E-02
104	GO:0009615: response to virus	1.92E-02
105	GO:0009816: defense response to bacterium, incompatible interaction	1.99E-02
106	GO:0006952: defense response	2.04E-02
107	GO:0006906: vesicle fusion	2.07E-02
108	GO:0048573: photoperiodism, flowering	2.15E-02
109	GO:0006970: response to osmotic stress	2.20E-02
110	GO:0016049: cell growth	2.23E-02
111	GO:0009813: flavonoid biosynthetic process	2.40E-02
112	GO:0010043: response to zinc ion	2.56E-02
113	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.63E-02
114	GO:0009867: jasmonic acid mediated signaling pathway	2.74E-02
115	GO:0045087: innate immune response	2.74E-02
116	GO:0016051: carbohydrate biosynthetic process	2.74E-02
117	GO:0044550: secondary metabolite biosynthetic process	2.76E-02
118	GO:0006887: exocytosis	3.09E-02
119	GO:0006886: intracellular protein transport	3.13E-02
120	GO:0051707: response to other organism	3.28E-02
121	GO:0009640: photomorphogenesis	3.28E-02
122	GO:0008643: carbohydrate transport	3.47E-02
123	GO:0016042: lipid catabolic process	3.64E-02
124	GO:0006629: lipid metabolic process	3.74E-02
125	GO:0031347: regulation of defense response	3.76E-02
126	GO:0042538: hyperosmotic salinity response	3.85E-02
127	GO:0009873: ethylene-activated signaling pathway	4.81E-02
128	GO:0009620: response to fungus	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0090416: nicotinate transporter activity	0.00E+00
2	GO:0005458: GDP-mannose transmembrane transporter activity	0.00E+00
3	GO:0090417: N-methylnicotinate transporter activity	0.00E+00
4	GO:0005388: calcium-transporting ATPase activity	1.11E-05
5	GO:0004708: MAP kinase kinase activity	1.06E-04
6	GO:0046027: phospholipid:diacylglycerol acyltransferase activity	1.50E-04
7	GO:0008809: carnitine racemase activity	1.50E-04
8	GO:0015085: calcium ion transmembrane transporter activity	1.50E-04
9	GO:0080042: ADP-glucose pyrophosphohydrolase activity	1.50E-04
10	GO:0008446: GDP-mannose 4,6-dehydratase activity	1.50E-04
11	GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity	1.50E-04
12	GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity	1.50E-04
13	GO:0004674: protein serine/threonine kinase activity	1.93E-04
14	GO:0017110: nucleoside-diphosphatase activity	3.42E-04
15	GO:0080041: ADP-ribose pyrophosphohydrolase activity	3.42E-04
16	GO:0016301: kinase activity	3.88E-04
17	GO:0005457: GDP-fucose transmembrane transporter activity	5.61E-04
18	GO:0008234: cysteine-type peptidase activity	7.77E-04
19	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	8.03E-04
20	GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity	8.03E-04
21	GO:0004165: dodecenoyl-CoA delta-isomerase activity	8.03E-04
22	GO:0019199: transmembrane receptor protein kinase activity	1.06E-03
23	GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity	1.06E-03
24	GO:0045431: flavonol synthase activity	1.35E-03
25	GO:0010294: abscisic acid glucosyltransferase activity	1.35E-03
26	GO:0008374: O-acyltransferase activity	1.35E-03
27	GO:0005459: UDP-galactose transmembrane transporter activity	1.35E-03
28	GO:0047631: ADP-ribose diphosphatase activity	1.35E-03
29	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	1.35E-03
30	GO:0004672: protein kinase activity	1.53E-03
31	GO:0000210: NAD+ diphosphatase activity	1.65E-03
32	GO:0035252: UDP-xylosyltransferase activity	1.65E-03
33	GO:0008519: ammonium transmembrane transporter activity	1.65E-03
34	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.68E-03
35	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.92E-03
36	GO:0008375: acetylglucosaminyltransferase activity	2.10E-03
37	GO:0005524: ATP binding	2.26E-03
38	GO:0005338: nucleotide-sugar transmembrane transporter activity	2.33E-03
39	GO:0004620: phospholipase activity	2.33E-03
40	GO:0004714: transmembrane receptor protein tyrosine kinase activity	2.70E-03
41	GO:0004630: phospholipase D activity	3.08E-03
42	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	3.08E-03
43	GO:0008047: enzyme activator activity	4.35E-03
44	GO:0004713: protein tyrosine kinase activity	4.35E-03
45	GO:0047372: acylglycerol lipase activity	4.80E-03
46	GO:0005262: calcium channel activity	5.75E-03
47	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	6.25E-03
48	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	6.53E-03
49	GO:0030553: cGMP binding	6.77E-03
50	GO:0004190: aspartic-type endopeptidase activity	6.77E-03
51	GO:0030552: cAMP binding	6.77E-03
52	GO:0005516: calmodulin binding	6.95E-03
53	GO:0005216: ion channel activity	8.40E-03
54	GO:0033612: receptor serine/threonine kinase binding	8.97E-03
55	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	9.56E-03
56	GO:0005509: calcium ion binding	9.64E-03
57	GO:0022891: substrate-specific transmembrane transporter activity	1.02E-02
58	GO:0003756: protein disulfide isomerase activity	1.08E-02
59	GO:0030551: cyclic nucleotide binding	1.20E-02
60	GO:0005249: voltage-gated potassium channel activity	1.20E-02
61	GO:0003713: transcription coactivator activity	1.27E-02
62	GO:0010181: FMN binding	1.34E-02
63	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.62E-02
64	GO:0004721: phosphoprotein phosphatase activity	2.15E-02
65	GO:0043531: ADP binding	2.24E-02
66	GO:0016757: transferase activity, transferring glycosyl groups	2.36E-02
67	GO:0005515: protein binding	2.45E-02
68	GO:0000149: SNARE binding	2.91E-02
69	GO:0004712: protein serine/threonine/tyrosine kinase activity	2.91E-02
70	GO:0005484: SNAP receptor activity	3.28E-02
71	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	3.28E-02
72	GO:0004722: protein serine/threonine phosphatase activity	3.33E-02
73	GO:0051537: 2 iron, 2 sulfur cluster binding	3.47E-02
74	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.66E-02
75	GO:0051287: NAD binding	3.76E-02
76	GO:0016298: lipase activity	4.15E-02
77	GO:0031625: ubiquitin protein ligase binding	4.36E-02
78	GO:0046872: metal ion binding	4.53E-02
79	GO:0045735: nutrient reservoir activity	4.56E-02
80	GO:0043565: sequence-specific DNA binding	4.63E-02
81	GO:0080044: quercetin 7-O-glucosyltransferase activity	4.88E-02
82	GO:0080043: quercetin 3-O-glucosyltransferase activity	4.88E-02
83	GO:0022857: transmembrane transporter activity	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0016021: integral component of membrane	2.69E-04
2	GO:0012505: endomembrane system	1.02E-03
3	GO:0005886: plasma membrane	1.51E-03
4	GO:0030173: integral component of Golgi membrane	1.98E-03
5	GO:0005887: integral component of plasma membrane	2.49E-03
6	GO:0010008: endosome membrane	6.53E-03
7	GO:0030176: integral component of endoplasmic reticulum membrane	6.77E-03
8	GO:0005795: Golgi stack	6.77E-03
9	GO:0043234: protein complex	7.30E-03
10	GO:0005758: mitochondrial intermembrane space	7.84E-03
11	GO:0009504: cell plate	1.41E-02
12	GO:0031201: SNARE complex	3.09E-02
13	GO:0005768: endosome	3.45E-02
14	GO:0005794: Golgi apparatus	3.80E-02
15	GO:0043231: intracellular membrane-bounded organelle	4.12E-02