co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G28420

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0000819: sister chromatid segregation	0.00E+00
2	GO:0009971: anastral spindle assembly involved in male meiosis	0.00E+00
3	GO:0044774: mitotic DNA integrity checkpoint	0.00E+00
4	GO:1901528: hydrogen peroxide mediated signaling pathway involved in stomatal movement	0.00E+00
5	GO:0043987: histone H3-S10 phosphorylation	5.18E-05
6	GO:0070509: calcium ion import	5.18E-05
7	GO:0010442: guard cell morphogenesis	5.18E-05
8	GO:0006071: glycerol metabolic process	1.16E-04
9	GO:0010033: response to organic substance	1.27E-04
10	GO:0052541: plant-type cell wall cellulose metabolic process	1.27E-04
11	GO:1901529: positive regulation of anion channel activity	1.27E-04
12	GO:0030261: chromosome condensation	2.17E-04
13	GO:0007052: mitotic spindle organization	2.17E-04
14	GO:1901527: abscisic acid-activated signaling pathway involved in stomatal movement	2.17E-04
15	GO:1902806: regulation of cell cycle G1/S phase transition	2.17E-04
16	GO:0007018: microtubule-based movement	2.91E-04
17	GO:0032465: regulation of cytokinesis	3.17E-04
18	GO:0016572: histone phosphorylation	3.17E-04
19	GO:0009647: skotomorphogenesis	3.17E-04
20	GO:0009558: embryo sac cellularization	3.17E-04
21	GO:0000910: cytokinesis	4.57E-04
22	GO:0007094: mitotic spindle assembly checkpoint	5.39E-04
23	GO:0010389: regulation of G2/M transition of mitotic cell cycle	6.60E-04
24	GO:2000037: regulation of stomatal complex patterning	7.87E-04
25	GO:2000033: regulation of seed dormancy process	7.87E-04
26	GO:0000712: resolution of meiotic recombination intermediates	9.18E-04
27	GO:0048528: post-embryonic root development	9.18E-04
28	GO:1900056: negative regulation of leaf senescence	9.18E-04
29	GO:0000082: G1/S transition of mitotic cell cycle	9.18E-04
30	GO:0010444: guard mother cell differentiation	9.18E-04
31	GO:0009640: photomorphogenesis	9.96E-04
32	GO:0046620: regulation of organ growth	1.06E-03
33	GO:0001522: pseudouridine synthesis	1.06E-03
34	GO:0032875: regulation of DNA endoreduplication	1.06E-03
35	GO:0007346: regulation of mitotic cell cycle	1.50E-03
36	GO:0006259: DNA metabolic process	1.67E-03
37	GO:0010162: seed dormancy process	1.67E-03
38	GO:0051026: chiasma assembly	1.67E-03
39	GO:0006265: DNA topological change	1.84E-03
40	GO:0048229: gametophyte development	1.84E-03
41	GO:0000266: mitochondrial fission	2.01E-03
42	GO:0006312: mitotic recombination	2.01E-03
43	GO:0030048: actin filament-based movement	2.19E-03
44	GO:0070588: calcium ion transmembrane transport	2.56E-03
45	GO:0006833: water transport	2.76E-03
46	GO:0080147: root hair cell development	2.96E-03
47	GO:0010026: trichome differentiation	3.16E-03
48	GO:0007017: microtubule-based process	3.16E-03
49	GO:0008284: positive regulation of cell proliferation	4.26E-03
50	GO:0034220: ion transmembrane transport	4.49E-03
51	GO:0010182: sugar mediated signaling pathway	4.72E-03
52	GO:0009741: response to brassinosteroid	4.72E-03
53	GO:0007059: chromosome segregation	4.96E-03
54	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	5.46E-03
55	GO:0010583: response to cyclopentenone	5.71E-03
56	GO:0015995: chlorophyll biosynthetic process	7.88E-03
57	GO:0016311: dephosphorylation	8.17E-03
58	GO:0000160: phosphorelay signal transduction system	8.76E-03
59	GO:0006629: lipid metabolic process	8.97E-03
60	GO:0048364: root development	9.36E-03
61	GO:0005975: carbohydrate metabolic process	1.10E-02
62	GO:0006631: fatty acid metabolic process	1.13E-02
63	GO:0009926: auxin polar transport	1.19E-02
64	GO:0051707: response to other organism	1.19E-02
65	GO:0009736: cytokinin-activated signaling pathway	1.47E-02
66	GO:0009555: pollen development	1.60E-02
67	GO:0007165: signal transduction	1.65E-02
68	GO:0048367: shoot system development	1.70E-02
69	GO:0051301: cell division	1.74E-02
70	GO:0009740: gibberellic acid mediated signaling pathway	1.81E-02
71	GO:0051726: regulation of cell cycle	1.97E-02
72	GO:0009742: brassinosteroid mediated signaling pathway	1.97E-02
73	GO:0009058: biosynthetic process	2.31E-02
74	GO:0006633: fatty acid biosynthetic process	2.61E-02
75	GO:0040008: regulation of growth	2.70E-02
76	GO:0045490: pectin catabolic process	2.79E-02
77	GO:0006470: protein dephosphorylation	3.07E-02
78	GO:0010468: regulation of gene expression	3.17E-02
79	GO:0071555: cell wall organization	3.24E-02
80	GO:0009826: unidimensional cell growth	3.71E-02
81	GO:0007049: cell cycle	4.12E-02
82	GO:0009723: response to ethylene	4.23E-02
83	GO:0015979: photosynthesis	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0047661: amino-acid racemase activity	0.00E+00
2	GO:0008889: glycerophosphodiester phosphodiesterase activity	3.26E-05
3	GO:0008569: ATP-dependent microtubule motor activity, minus-end-directed	5.18E-05
4	GO:0009374: biotin binding	5.18E-05
5	GO:0035175: histone kinase activity (H3-S10 specific)	1.27E-04
6	GO:0016630: protochlorophyllide reductase activity	1.27E-04
7	GO:0070330: aromatase activity	2.17E-04
8	GO:0003916: DNA topoisomerase activity	3.17E-04
9	GO:0008017: microtubule binding	3.73E-04
10	GO:0003989: acetyl-CoA carboxylase activity	5.39E-04
11	GO:0018685: alkane 1-monooxygenase activity	5.39E-04
12	GO:0030332: cyclin binding	6.60E-04
13	GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity	1.20E-03
14	GO:0008353: RNA polymerase II carboxy-terminal domain kinase activity	1.20E-03
15	GO:0003777: microtubule motor activity	1.46E-03
16	GO:0004650: polygalacturonase activity	1.70E-03
17	GO:0005089: Rho guanyl-nucleotide exchange factor activity	1.84E-03
18	GO:0005262: calcium channel activity	2.19E-03
19	GO:0009982: pseudouridine synthase activity	2.19E-03
20	GO:0003774: motor activity	2.38E-03
21	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	2.38E-03
22	GO:0008094: DNA-dependent ATPase activity	3.37E-03
23	GO:0004176: ATP-dependent peptidase activity	3.37E-03
24	GO:0030570: pectate lyase activity	3.80E-03
25	GO:0051015: actin filament binding	5.97E-03
26	GO:0000156: phosphorelay response regulator activity	5.97E-03
27	GO:0016791: phosphatase activity	6.23E-03
28	GO:0008237: metallopeptidase activity	6.49E-03
29	GO:0005200: structural constituent of cytoskeleton	6.49E-03
30	GO:0015250: water channel activity	7.04E-03
31	GO:0004722: protein serine/threonine phosphatase activity	7.98E-03
32	GO:0004222: metalloendopeptidase activity	9.06E-03
33	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	9.06E-03
34	GO:0003993: acid phosphatase activity	1.03E-02
35	GO:0035091: phosphatidylinositol binding	1.26E-02
36	GO:0016887: ATPase activity	1.39E-02
37	GO:0016829: lyase activity	2.35E-02
38	GO:0016788: hydrolase activity, acting on ester bonds	3.86E-02
39	GO:0016491: oxidoreductase activity	4.25E-02
40	GO:0004672: protein kinase activity	4.73E-02
41	GO:0052689: carboxylic ester hydrolase activity	4.77E-02

Rank	GO Term	Adjusted P value
1	GO:0005872: minus-end kinesin complex	0.00E+00
2	GO:0000777: condensed chromosome kinetochore	1.10E-05
3	GO:0005876: spindle microtubule	4.00E-05
4	GO:0000796: condensin complex	5.18E-05
5	GO:0000780: condensed nuclear chromosome, centromeric region	1.27E-04
6	GO:0051233: spindle midzone	1.27E-04
7	GO:0032133: chromosome passenger complex	1.27E-04
8	GO:0009317: acetyl-CoA carboxylase complex	2.17E-04
9	GO:0030286: dynein complex	4.24E-04
10	GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing)	4.24E-04
11	GO:0005828: kinetochore microtubule	4.24E-04
12	GO:0046658: anchored component of plasma membrane	5.04E-04
13	GO:0000776: kinetochore	5.39E-04
14	GO:0000793: condensed chromosome	6.60E-04
15	GO:0010369: chromocenter	7.87E-04
16	GO:0031225: anchored component of membrane	8.37E-04
17	GO:0000794: condensed nuclear chromosome	9.18E-04
18	GO:0000307: cyclin-dependent protein kinase holoenzyme complex	1.20E-03
19	GO:0016459: myosin complex	1.67E-03
20	GO:0005884: actin filament	1.84E-03
21	GO:0009524: phragmoplast	2.45E-03
22	GO:0015629: actin cytoskeleton	3.80E-03
23	GO:0005871: kinesin complex	4.26E-03
24	GO:0031965: nuclear membrane	5.21E-03
25	GO:0005874: microtubule	5.87E-03
26	GO:0005737: cytoplasm	7.01E-03
27	GO:0005819: spindle	1.06E-02
28	GO:0005856: cytoskeleton	1.30E-02
29	GO:0005635: nuclear envelope	1.55E-02
30	GO:0005618: cell wall	3.68E-02
31	GO:0009941: chloroplast envelope	4.53E-02