GO Enrichment Analysis of Co-expressed Genes with
AT3G27610
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0097250: mitochondrial respiratory chain supercomplex assembly | 0.00E+00 |
| 2 | GO:0072334: UDP-galactose transmembrane transport | 2.69E-06 |
| 3 | GO:0006457: protein folding | 2.56E-05 |
| 4 | GO:0030968: endoplasmic reticulum unfolded protein response | 4.37E-05 |
| 5 | GO:0044376: RNA polymerase II complex import to nucleus | 7.23E-05 |
| 6 | GO:0000077: DNA damage checkpoint | 7.23E-05 |
| 7 | GO:0042350: GDP-L-fucose biosynthetic process | 7.23E-05 |
| 8 | GO:1990022: RNA polymerase III complex localization to nucleus | 7.23E-05 |
| 9 | GO:0009156: ribonucleoside monophosphate biosynthetic process | 1.74E-04 |
| 10 | GO:0006597: spermine biosynthetic process | 1.74E-04 |
| 11 | GO:0042853: L-alanine catabolic process | 1.74E-04 |
| 12 | GO:0040020: regulation of meiotic nuclear division | 1.74E-04 |
| 13 | GO:0042351: 'de novo' GDP-L-fucose biosynthetic process | 2.93E-04 |
| 14 | GO:0009226: nucleotide-sugar biosynthetic process | 4.23E-04 |
| 15 | GO:0010971: positive regulation of G2/M transition of mitotic cell cycle | 4.23E-04 |
| 16 | GO:0009165: nucleotide biosynthetic process | 5.65E-04 |
| 17 | GO:0006596: polyamine biosynthetic process | 8.73E-04 |
| 18 | GO:0043248: proteasome assembly | 8.73E-04 |
| 19 | GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response | 1.04E-03 |
| 20 | GO:2000033: regulation of seed dormancy process | 1.04E-03 |
| 21 | GO:0006744: ubiquinone biosynthetic process | 1.21E-03 |
| 22 | GO:0000338: protein deneddylation | 1.21E-03 |
| 23 | GO:0009938: negative regulation of gibberellic acid mediated signaling pathway | 1.40E-03 |
| 24 | GO:0010100: negative regulation of photomorphogenesis | 1.59E-03 |
| 25 | GO:0015780: nucleotide-sugar transport | 1.80E-03 |
| 26 | GO:0010332: response to gamma radiation | 1.80E-03 |
| 27 | GO:0090332: stomatal closure | 2.01E-03 |
| 28 | GO:0072593: reactive oxygen species metabolic process | 2.46E-03 |
| 29 | GO:0006913: nucleocytoplasmic transport | 2.46E-03 |
| 30 | GO:0000266: mitochondrial fission | 2.70E-03 |
| 31 | GO:0007033: vacuole organization | 3.44E-03 |
| 32 | GO:0000162: tryptophan biosynthetic process | 3.71E-03 |
| 33 | GO:2000377: regulation of reactive oxygen species metabolic process | 3.98E-03 |
| 34 | GO:0009116: nucleoside metabolic process | 3.98E-03 |
| 35 | GO:0009863: salicylic acid mediated signaling pathway | 3.98E-03 |
| 36 | GO:0030150: protein import into mitochondrial matrix | 3.98E-03 |
| 37 | GO:0010187: negative regulation of seed germination | 3.98E-03 |
| 38 | GO:0009790: embryo development | 4.16E-03 |
| 39 | GO:0008299: isoprenoid biosynthetic process | 4.26E-03 |
| 40 | GO:0006413: translational initiation | 4.58E-03 |
| 41 | GO:0030433: ubiquitin-dependent ERAD pathway | 4.83E-03 |
| 42 | GO:0009411: response to UV | 5.13E-03 |
| 43 | GO:0009306: protein secretion | 5.43E-03 |
| 44 | GO:0051028: mRNA transport | 5.74E-03 |
| 45 | GO:0010118: stomatal movement | 6.05E-03 |
| 46 | GO:0007275: multicellular organism development | 6.72E-03 |
| 47 | GO:0006623: protein targeting to vacuole | 7.04E-03 |
| 48 | GO:0016032: viral process | 7.72E-03 |
| 49 | GO:0030163: protein catabolic process | 8.07E-03 |
| 50 | GO:0006904: vesicle docking involved in exocytosis | 8.79E-03 |
| 51 | GO:0001666: response to hypoxia | 9.54E-03 |
| 52 | GO:0016192: vesicle-mediated transport | 9.91E-03 |
| 53 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 9.92E-03 |
| 54 | GO:0010029: regulation of seed germination | 9.92E-03 |
| 55 | GO:0006906: vesicle fusion | 1.03E-02 |
| 56 | GO:0048767: root hair elongation | 1.19E-02 |
| 57 | GO:0016042: lipid catabolic process | 1.35E-02 |
| 58 | GO:0009867: jasmonic acid mediated signaling pathway | 1.36E-02 |
| 59 | GO:0006887: exocytosis | 1.54E-02 |
| 60 | GO:0010114: response to red light | 1.63E-02 |
| 61 | GO:0051707: response to other organism | 1.63E-02 |
| 62 | GO:0009640: photomorphogenesis | 1.63E-02 |
| 63 | GO:0000209: protein polyubiquitination | 1.67E-02 |
| 64 | GO:0008643: carbohydrate transport | 1.72E-02 |
| 65 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 1.86E-02 |
| 66 | GO:0042538: hyperosmotic salinity response | 1.91E-02 |
| 67 | GO:0046686: response to cadmium ion | 1.99E-02 |
| 68 | GO:0009585: red, far-red light phototransduction | 2.01E-02 |
| 69 | GO:0010224: response to UV-B | 2.06E-02 |
| 70 | GO:0009740: gibberellic acid mediated signaling pathway | 2.47E-02 |
| 71 | GO:0009553: embryo sac development | 2.53E-02 |
| 72 | GO:0051301: cell division | 2.70E-02 |
| 73 | GO:0007165: signal transduction | 2.86E-02 |
| 74 | GO:0009058: biosynthetic process | 3.15E-02 |
| 75 | GO:0010150: leaf senescence | 3.81E-02 |
| 76 | GO:0009739: response to gibberellin | 4.13E-02 |
| 77 | GO:0006470: protein dephosphorylation | 4.19E-02 |
| 78 | GO:0009414: response to water deprivation | 4.87E-02 |
| 79 | GO:0042742: defense response to bacterium | 4.98E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0052684: L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity | 0.00E+00 |
| 2 | GO:0005459: UDP-galactose transmembrane transporter activity | 8.65E-06 |
| 3 | GO:0051082: unfolded protein binding | 1.96E-05 |
| 4 | GO:0016768: spermine synthase activity | 7.23E-05 |
| 5 | GO:0050577: GDP-L-fucose synthase activity | 7.23E-05 |
| 6 | GO:1990381: ubiquitin-specific protease binding | 7.23E-05 |
| 7 | GO:0019784: NEDD8-specific protease activity | 7.23E-05 |
| 8 | GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity | 7.23E-05 |
| 9 | GO:0004766: spermidine synthase activity | 1.74E-04 |
| 10 | GO:0050347: trans-octaprenyltranstransferase activity | 1.74E-04 |
| 11 | GO:0052924: all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity | 1.74E-04 |
| 12 | GO:0000774: adenyl-nucleotide exchange factor activity | 1.74E-04 |
| 13 | GO:0005460: UDP-glucose transmembrane transporter activity | 4.23E-04 |
| 14 | GO:0004749: ribose phosphate diphosphokinase activity | 4.23E-04 |
| 15 | GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity | 4.23E-04 |
| 16 | GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway | 5.65E-04 |
| 17 | GO:0004659: prenyltransferase activity | 5.65E-04 |
| 18 | GO:0004834: tryptophan synthase activity | 5.65E-04 |
| 19 | GO:0047714: galactolipase activity | 8.73E-04 |
| 20 | GO:0005338: nucleotide-sugar transmembrane transporter activity | 1.21E-03 |
| 21 | GO:0008970: phosphatidylcholine 1-acylhydrolase activity | 1.59E-03 |
| 22 | GO:0005198: structural molecule activity | 1.69E-03 |
| 23 | GO:0000989: transcription factor activity, transcription factor binding | 1.80E-03 |
| 24 | GO:0003924: GTPase activity | 2.24E-03 |
| 25 | GO:0004161: dimethylallyltranstransferase activity | 2.46E-03 |
| 26 | GO:0005388: calcium-transporting ATPase activity | 2.94E-03 |
| 27 | GO:0004867: serine-type endopeptidase inhibitor activity | 3.44E-03 |
| 28 | GO:0030170: pyridoxal phosphate binding | 3.96E-03 |
| 29 | GO:0051087: chaperone binding | 4.26E-03 |
| 30 | GO:0003743: translation initiation factor activity | 5.73E-03 |
| 31 | GO:0050662: coenzyme binding | 6.70E-03 |
| 32 | GO:0016853: isomerase activity | 6.70E-03 |
| 33 | GO:0004806: triglyceride lipase activity | 1.07E-02 |
| 34 | GO:0042803: protein homodimerization activity | 1.18E-02 |
| 35 | GO:0005096: GTPase activator activity | 1.19E-02 |
| 36 | GO:0004222: metalloendopeptidase activity | 1.23E-02 |
| 37 | GO:0050897: cobalt ion binding | 1.27E-02 |
| 38 | GO:0003746: translation elongation factor activity | 1.36E-02 |
| 39 | GO:0000149: SNARE binding | 1.45E-02 |
| 40 | GO:0005484: SNAP receptor activity | 1.63E-02 |
| 41 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.72E-02 |
| 42 | GO:0045735: nutrient reservoir activity | 2.26E-02 |
| 43 | GO:0004650: polygalacturonase activity | 2.42E-02 |
| 44 | GO:0022857: transmembrane transporter activity | 2.47E-02 |
| 45 | GO:0016829: lyase activity | 3.20E-02 |
| 46 | GO:0008565: protein transporter activity | 3.44E-02 |
| 47 | GO:0005507: copper ion binding | 3.52E-02 |
| 48 | GO:0015297: antiporter activity | 3.69E-02 |
| 49 | GO:0008017: microtubule binding | 3.94E-02 |
| 50 | GO:0005525: GTP binding | 4.06E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0033106: cis-Golgi network membrane | 0.00E+00 |
| 2 | GO:0000836: Hrd1p ubiquitin ligase complex | 7.23E-05 |
| 3 | GO:0044322: endoplasmic reticulum quality control compartment | 7.23E-05 |
| 4 | GO:0001405: presequence translocase-associated import motor | 7.23E-05 |
| 5 | GO:0031080: nuclear pore outer ring | 2.93E-04 |
| 6 | GO:0036513: Derlin-1 retrotranslocation complex | 4.23E-04 |
| 7 | GO:0005788: endoplasmic reticulum lumen | 7.74E-04 |
| 8 | GO:0016272: prefoldin complex | 1.04E-03 |
| 9 | GO:0030173: integral component of Golgi membrane | 1.04E-03 |
| 10 | GO:0008180: COP9 signalosome | 1.80E-03 |
| 11 | GO:0031901: early endosome membrane | 1.80E-03 |
| 12 | GO:0000502: proteasome complex | 2.02E-03 |
| 13 | GO:0005635: nuclear envelope | 2.16E-03 |
| 14 | GO:0008541: proteasome regulatory particle, lid subcomplex | 2.46E-03 |
| 15 | GO:0030176: integral component of endoplasmic reticulum membrane | 3.44E-03 |
| 16 | GO:0043234: protein complex | 3.71E-03 |
| 17 | GO:0009524: phragmoplast | 3.76E-03 |
| 18 | GO:0005783: endoplasmic reticulum | 4.56E-03 |
| 19 | GO:0031965: nuclear membrane | 7.04E-03 |
| 20 | GO:0016592: mediator complex | 7.72E-03 |
| 21 | GO:0005886: plasma membrane | 7.93E-03 |
| 22 | GO:0005874: microtubule | 9.09E-03 |
| 23 | GO:0005819: spindle | 1.45E-02 |
| 24 | GO:0031902: late endosome membrane | 1.54E-02 |
| 25 | GO:0031201: SNARE complex | 1.54E-02 |
| 26 | GO:0005774: vacuolar membrane | 1.58E-02 |
| 27 | GO:0005789: endoplasmic reticulum membrane | 1.94E-02 |
| 28 | GO:0005834: heterotrimeric G-protein complex | 2.37E-02 |
| 29 | GO:0009543: chloroplast thylakoid lumen | 3.03E-02 |
| 30 | GO:0005759: mitochondrial matrix | 3.56E-02 |
| 31 | GO:0009705: plant-type vacuole membrane | 3.81E-02 |
| 32 | GO:0005615: extracellular space | 4.13E-02 |
| 33 | GO:0009506: plasmodesma | 4.28E-02 |