GO Enrichment Analysis of Co-expressed Genes with
AT3G27210
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0036258: multivesicular body assembly | 0.00E+00 |
| 2 | GO:2000117: negative regulation of cysteine-type endopeptidase activity | 0.00E+00 |
| 3 | GO:0002191: cap-dependent translational initiation | 0.00E+00 |
| 4 | GO:0006489: dolichyl diphosphate biosynthetic process | 0.00E+00 |
| 5 | GO:0070070: proton-transporting V-type ATPase complex assembly | 0.00E+00 |
| 6 | GO:0006511: ubiquitin-dependent protein catabolic process | 1.84E-08 |
| 7 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 3.44E-05 |
| 8 | GO:0006102: isocitrate metabolic process | 8.48E-05 |
| 9 | GO:1901430: positive regulation of syringal lignin biosynthetic process | 1.30E-04 |
| 10 | GO:0006144: purine nucleobase metabolic process | 1.30E-04 |
| 11 | GO:0080120: CAAX-box protein maturation | 1.30E-04 |
| 12 | GO:0071586: CAAX-box protein processing | 1.30E-04 |
| 13 | GO:0019628: urate catabolic process | 1.30E-04 |
| 14 | GO:0006099: tricarboxylic acid cycle | 2.74E-04 |
| 15 | GO:0010372: positive regulation of gibberellin biosynthetic process | 2.99E-04 |
| 16 | GO:0080026: response to indolebutyric acid | 2.99E-04 |
| 17 | GO:0043132: NAD transport | 2.99E-04 |
| 18 | GO:0046939: nucleotide phosphorylation | 2.99E-04 |
| 19 | GO:0007031: peroxisome organization | 3.67E-04 |
| 20 | GO:0009062: fatty acid catabolic process | 4.92E-04 |
| 21 | GO:0010359: regulation of anion channel activity | 4.92E-04 |
| 22 | GO:0043617: cellular response to sucrose starvation | 4.92E-04 |
| 23 | GO:0044375: regulation of peroxisome size | 4.92E-04 |
| 24 | GO:0090630: activation of GTPase activity | 4.92E-04 |
| 25 | GO:0015992: proton transport | 5.50E-04 |
| 26 | GO:0051603: proteolysis involved in cellular protein catabolic process | 5.54E-04 |
| 27 | GO:0030433: ubiquitin-dependent ERAD pathway | 6.01E-04 |
| 28 | GO:0006096: glycolytic process | 6.55E-04 |
| 29 | GO:0015858: nucleoside transport | 7.04E-04 |
| 30 | GO:0080024: indolebutyric acid metabolic process | 7.04E-04 |
| 31 | GO:0070676: intralumenal vesicle formation | 7.04E-04 |
| 32 | GO:0070072: vacuolar proton-transporting V-type ATPase complex assembly | 7.04E-04 |
| 33 | GO:0010363: regulation of plant-type hypersensitive response | 9.34E-04 |
| 34 | GO:0032968: positive regulation of transcription elongation from RNA polymerase II promoter | 9.34E-04 |
| 35 | GO:0009646: response to absence of light | 9.50E-04 |
| 36 | GO:0098719: sodium ion import across plasma membrane | 1.18E-03 |
| 37 | GO:0006564: L-serine biosynthetic process | 1.18E-03 |
| 38 | GO:0005513: detection of calcium ion | 1.18E-03 |
| 39 | GO:0097428: protein maturation by iron-sulfur cluster transfer | 1.18E-03 |
| 40 | GO:0006461: protein complex assembly | 1.18E-03 |
| 41 | GO:0030163: protein catabolic process | 1.23E-03 |
| 42 | GO:0007035: vacuolar acidification | 1.45E-03 |
| 43 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 1.45E-03 |
| 44 | GO:0001731: formation of translation preinitiation complex | 1.45E-03 |
| 45 | GO:0009651: response to salt stress | 1.59E-03 |
| 46 | GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response | 1.73E-03 |
| 47 | GO:0009612: response to mechanical stimulus | 1.73E-03 |
| 48 | GO:0006888: ER to Golgi vesicle-mediated transport | 1.81E-03 |
| 49 | GO:0042742: defense response to bacterium | 1.98E-03 |
| 50 | GO:0000338: protein deneddylation | 2.04E-03 |
| 51 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 2.36E-03 |
| 52 | GO:0006402: mRNA catabolic process | 2.36E-03 |
| 53 | GO:0006367: transcription initiation from RNA polymerase II promoter | 2.69E-03 |
| 54 | GO:0010120: camalexin biosynthetic process | 2.69E-03 |
| 55 | GO:0006972: hyperosmotic response | 2.69E-03 |
| 56 | GO:0015031: protein transport | 3.02E-03 |
| 57 | GO:0009821: alkaloid biosynthetic process | 3.04E-03 |
| 58 | GO:0046685: response to arsenic-containing substance | 3.04E-03 |
| 59 | GO:0090332: stomatal closure | 3.41E-03 |
| 60 | GO:0051453: regulation of intracellular pH | 3.41E-03 |
| 61 | GO:0043069: negative regulation of programmed cell death | 3.79E-03 |
| 62 | GO:0009682: induced systemic resistance | 4.18E-03 |
| 63 | GO:0072593: reactive oxygen species metabolic process | 4.18E-03 |
| 64 | GO:0046686: response to cadmium ion | 4.32E-03 |
| 65 | GO:0006820: anion transport | 4.58E-03 |
| 66 | GO:0006890: retrograde vesicle-mediated transport, Golgi to ER | 4.58E-03 |
| 67 | GO:0006790: sulfur compound metabolic process | 4.58E-03 |
| 68 | GO:0006807: nitrogen compound metabolic process | 5.00E-03 |
| 69 | GO:0034605: cellular response to heat | 5.44E-03 |
| 70 | GO:0006446: regulation of translational initiation | 5.44E-03 |
| 71 | GO:0046854: phosphatidylinositol phosphorylation | 5.88E-03 |
| 72 | GO:0034976: response to endoplasmic reticulum stress | 6.34E-03 |
| 73 | GO:0006338: chromatin remodeling | 6.81E-03 |
| 74 | GO:0006487: protein N-linked glycosylation | 6.81E-03 |
| 75 | GO:0009058: biosynthetic process | 8.21E-03 |
| 76 | GO:0010227: floral organ abscission | 8.82E-03 |
| 77 | GO:0042744: hydrogen peroxide catabolic process | 8.86E-03 |
| 78 | GO:0009561: megagametogenesis | 9.35E-03 |
| 79 | GO:0009306: protein secretion | 9.35E-03 |
| 80 | GO:0010089: xylem development | 9.35E-03 |
| 81 | GO:0042147: retrograde transport, endosome to Golgi | 9.90E-03 |
| 82 | GO:0015991: ATP hydrolysis coupled proton transport | 1.04E-02 |
| 83 | GO:0048868: pollen tube development | 1.10E-02 |
| 84 | GO:0015986: ATP synthesis coupled proton transport | 1.16E-02 |
| 85 | GO:0006814: sodium ion transport | 1.16E-02 |
| 86 | GO:0055072: iron ion homeostasis | 1.22E-02 |
| 87 | GO:0006635: fatty acid beta-oxidation | 1.28E-02 |
| 88 | GO:0009617: response to bacterium | 1.29E-02 |
| 89 | GO:0031047: gene silencing by RNA | 1.34E-02 |
| 90 | GO:0019760: glucosinolate metabolic process | 1.46E-02 |
| 91 | GO:0006464: cellular protein modification process | 1.46E-02 |
| 92 | GO:0006914: autophagy | 1.46E-02 |
| 93 | GO:0009567: double fertilization forming a zygote and endosperm | 1.46E-02 |
| 94 | GO:0071805: potassium ion transmembrane transport | 1.53E-02 |
| 95 | GO:0016579: protein deubiquitination | 1.59E-02 |
| 96 | GO:0009615: response to virus | 1.66E-02 |
| 97 | GO:0055114: oxidation-reduction process | 1.73E-02 |
| 98 | GO:0006950: response to stress | 1.86E-02 |
| 99 | GO:0010311: lateral root formation | 2.07E-02 |
| 100 | GO:0048767: root hair elongation | 2.07E-02 |
| 101 | GO:0006811: ion transport | 2.15E-02 |
| 102 | GO:0006499: N-terminal protein myristoylation | 2.15E-02 |
| 103 | GO:0010119: regulation of stomatal movement | 2.22E-02 |
| 104 | GO:0010043: response to zinc ion | 2.22E-02 |
| 105 | GO:0045087: innate immune response | 2.37E-02 |
| 106 | GO:0006886: intracellular protein transport | 2.56E-02 |
| 107 | GO:0006839: mitochondrial transport | 2.60E-02 |
| 108 | GO:0009640: photomorphogenesis | 2.84E-02 |
| 109 | GO:0009744: response to sucrose | 2.84E-02 |
| 110 | GO:0009751: response to salicylic acid | 3.02E-02 |
| 111 | GO:0006397: mRNA processing | 3.19E-02 |
| 112 | GO:0031347: regulation of defense response | 3.25E-02 |
| 113 | GO:0009809: lignin biosynthetic process | 3.51E-02 |
| 114 | GO:0009585: red, far-red light phototransduction | 3.51E-02 |
| 115 | GO:0050832: defense response to fungus | 4.04E-02 |
| 116 | GO:0009620: response to fungus | 4.23E-02 |
| 117 | GO:0016569: covalent chromatin modification | 4.32E-02 |
| 118 | GO:0009553: embryo sac development | 4.41E-02 |
| 119 | GO:0018105: peptidyl-serine phosphorylation | 4.60E-02 |
| 120 | GO:0009735: response to cytokinin | 4.93E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008418: protein-N-terminal asparagine amidohydrolase activity | 0.00E+00 |
| 2 | GO:0047720: indoleacetaldoxime dehydratase activity | 0.00E+00 |
| 3 | GO:0004846: urate oxidase activity | 0.00E+00 |
| 4 | GO:0098808: mRNA cap binding | 0.00E+00 |
| 5 | GO:0044610: FMN transmembrane transporter activity | 0.00E+00 |
| 6 | GO:0004298: threonine-type endopeptidase activity | 5.43E-09 |
| 7 | GO:0004449: isocitrate dehydrogenase (NAD+) activity | 7.44E-06 |
| 8 | GO:0036402: proteasome-activating ATPase activity | 3.44E-05 |
| 9 | GO:0008233: peptidase activity | 8.62E-05 |
| 10 | GO:0003975: UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity | 1.30E-04 |
| 11 | GO:0019786: Atg8-specific protease activity | 1.30E-04 |
| 12 | GO:0048037: cofactor binding | 1.30E-04 |
| 13 | GO:0015230: FAD transmembrane transporter activity | 1.30E-04 |
| 14 | GO:0004743: pyruvate kinase activity | 1.58E-04 |
| 15 | GO:0030955: potassium ion binding | 1.58E-04 |
| 16 | GO:0051724: NAD transporter activity | 2.99E-04 |
| 17 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 2.99E-04 |
| 18 | GO:0019779: Atg8 activating enzyme activity | 2.99E-04 |
| 19 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 2.99E-04 |
| 20 | GO:0008963: phospho-N-acetylmuramoyl-pentapeptide-transferase activity | 2.99E-04 |
| 21 | GO:0015228: coenzyme A transmembrane transporter activity | 2.99E-04 |
| 22 | GO:0004617: phosphoglycerate dehydrogenase activity | 2.99E-04 |
| 23 | GO:0017025: TBP-class protein binding | 3.67E-04 |
| 24 | GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity | 4.92E-04 |
| 25 | GO:0003863: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity | 4.92E-04 |
| 26 | GO:0019201: nucleotide kinase activity | 7.04E-04 |
| 27 | GO:0004165: dodecenoyl-CoA delta-isomerase activity | 7.04E-04 |
| 28 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 9.34E-04 |
| 29 | GO:0016820: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 9.34E-04 |
| 30 | GO:0008022: protein C-terminus binding | 9.34E-04 |
| 31 | GO:0019776: Atg8 ligase activity | 9.34E-04 |
| 32 | GO:0004518: nuclease activity | 1.15E-03 |
| 33 | GO:0080122: AMP transmembrane transporter activity | 1.18E-03 |
| 34 | GO:0051117: ATPase binding | 1.45E-03 |
| 35 | GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity | 1.45E-03 |
| 36 | GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity | 1.45E-03 |
| 37 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 1.73E-03 |
| 38 | GO:0004017: adenylate kinase activity | 1.73E-03 |
| 39 | GO:0005347: ATP transmembrane transporter activity | 1.73E-03 |
| 40 | GO:0004656: procollagen-proline 4-dioxygenase activity | 1.73E-03 |
| 41 | GO:0015217: ADP transmembrane transporter activity | 1.73E-03 |
| 42 | GO:0015288: porin activity | 2.36E-03 |
| 43 | GO:0008308: voltage-gated anion channel activity | 2.69E-03 |
| 44 | GO:0000287: magnesium ion binding | 2.76E-03 |
| 45 | GO:0016844: strictosidine synthase activity | 3.41E-03 |
| 46 | GO:0005198: structural molecule activity | 3.66E-03 |
| 47 | GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity | 3.79E-03 |
| 48 | GO:0051287: NAD binding | 3.93E-03 |
| 49 | GO:0015386: potassium:proton antiporter activity | 4.18E-03 |
| 50 | GO:0046961: proton-transporting ATPase activity, rotational mechanism | 4.18E-03 |
| 51 | GO:0004175: endopeptidase activity | 5.44E-03 |
| 52 | GO:0043130: ubiquitin binding | 6.81E-03 |
| 53 | GO:0031418: L-ascorbic acid binding | 6.81E-03 |
| 54 | GO:0016787: hydrolase activity | 7.52E-03 |
| 55 | GO:0036459: thiol-dependent ubiquitinyl hydrolase activity | 7.79E-03 |
| 56 | GO:0005524: ATP binding | 8.56E-03 |
| 57 | GO:0008565: protein transporter activity | 9.32E-03 |
| 58 | GO:0003756: protein disulfide isomerase activity | 9.35E-03 |
| 59 | GO:0004402: histone acetyltransferase activity | 1.04E-02 |
| 60 | GO:0016887: ATPase activity | 1.06E-02 |
| 61 | GO:0016853: isomerase activity | 1.16E-02 |
| 62 | GO:0000166: nucleotide binding | 1.26E-02 |
| 63 | GO:0046872: metal ion binding | 1.27E-02 |
| 64 | GO:0004843: thiol-dependent ubiquitin-specific protease activity | 1.28E-02 |
| 65 | GO:0015385: sodium:proton antiporter activity | 1.40E-02 |
| 66 | GO:0008237: metallopeptidase activity | 1.53E-02 |
| 67 | GO:0016597: amino acid binding | 1.59E-02 |
| 68 | GO:0004601: peroxidase activity | 1.67E-02 |
| 69 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 1.79E-02 |
| 70 | GO:0004683: calmodulin-dependent protein kinase activity | 1.86E-02 |
| 71 | GO:0005096: GTPase activator activity | 2.07E-02 |
| 72 | GO:0016301: kinase activity | 2.09E-02 |
| 73 | GO:0004222: metalloendopeptidase activity | 2.15E-02 |
| 74 | GO:0050897: cobalt ion binding | 2.22E-02 |
| 75 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 2.37E-02 |
| 76 | GO:0005509: calcium ion binding | 2.77E-02 |
| 77 | GO:0035091: phosphatidylinositol binding | 3.00E-02 |
| 78 | GO:0016298: lipase activity | 3.60E-02 |
| 79 | GO:0008026: ATP-dependent helicase activity | 4.70E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000502: proteasome complex | 7.03E-13 |
| 2 | GO:0005839: proteasome core complex | 5.43E-09 |
| 3 | GO:0005829: cytosol | 1.76E-06 |
| 4 | GO:0016471: vacuolar proton-transporting V-type ATPase complex | 1.40E-05 |
| 5 | GO:0031597: cytosolic proteasome complex | 4.86E-05 |
| 6 | GO:0031595: nuclear proteasome complex | 6.54E-05 |
| 7 | GO:0019773: proteasome core complex, alpha-subunit complex | 1.07E-04 |
| 8 | GO:0012510: trans-Golgi network transport vesicle membrane | 1.30E-04 |
| 9 | GO:0016442: RISC complex | 1.30E-04 |
| 10 | GO:0008540: proteasome regulatory particle, base subcomplex | 1.58E-04 |
| 11 | GO:0046861: glyoxysomal membrane | 4.92E-04 |
| 12 | GO:0005838: proteasome regulatory particle | 4.92E-04 |
| 13 | GO:0005774: vacuolar membrane | 5.11E-04 |
| 14 | GO:0005775: vacuolar lumen | 7.04E-04 |
| 15 | GO:0005776: autophagosome | 9.34E-04 |
| 16 | GO:0000813: ESCRT I complex | 1.18E-03 |
| 17 | GO:0000220: vacuolar proton-transporting V-type ATPase, V0 domain | 1.18E-03 |
| 18 | GO:0005778: peroxisomal membrane | 1.38E-03 |
| 19 | GO:0016282: eukaryotic 43S preinitiation complex | 1.45E-03 |
| 20 | GO:0030127: COPII vesicle coat | 1.45E-03 |
| 21 | GO:0030904: retromer complex | 1.45E-03 |
| 22 | GO:0033290: eukaryotic 48S preinitiation complex | 1.73E-03 |
| 23 | GO:0005618: cell wall | 2.29E-03 |
| 24 | GO:0000421: autophagosome membrane | 2.36E-03 |
| 25 | GO:0031982: vesicle | 2.36E-03 |
| 26 | GO:0005779: integral component of peroxisomal membrane | 2.69E-03 |
| 27 | GO:0046930: pore complex | 2.69E-03 |
| 28 | GO:0009514: glyoxysome | 2.69E-03 |
| 29 | GO:0031902: late endosome membrane | 3.00E-03 |
| 30 | GO:0008180: COP9 signalosome | 3.04E-03 |
| 31 | GO:0010494: cytoplasmic stress granule | 3.04E-03 |
| 32 | GO:0005777: peroxisome | 3.38E-03 |
| 33 | GO:0008541: proteasome regulatory particle, lid subcomplex | 4.18E-03 |
| 34 | GO:0048471: perinuclear region of cytoplasm | 4.18E-03 |
| 35 | GO:0005773: vacuole | 4.33E-03 |
| 36 | GO:0030176: integral component of endoplasmic reticulum membrane | 5.88E-03 |
| 37 | GO:0005737: cytoplasm | 5.94E-03 |
| 38 | GO:0005768: endosome | 6.82E-03 |
| 39 | GO:0005741: mitochondrial outer membrane | 7.79E-03 |
| 40 | GO:0031410: cytoplasmic vesicle | 8.30E-03 |
| 41 | GO:0005759: mitochondrial matrix | 9.79E-03 |
| 42 | GO:0005794: Golgi apparatus | 1.02E-02 |
| 43 | GO:0032580: Golgi cisterna membrane | 1.46E-02 |
| 44 | GO:0000932: P-body | 1.66E-02 |
| 45 | GO:0005783: endoplasmic reticulum | 2.14E-02 |
| 46 | GO:0000325: plant-type vacuole | 2.22E-02 |
| 47 | GO:0005802: trans-Golgi network | 2.29E-02 |
| 48 | GO:0005622: intracellular | 2.60E-02 |
| 49 | GO:0005635: nuclear envelope | 3.68E-02 |
| 50 | GO:0010008: endosome membrane | 4.04E-02 |