co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G26932

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0080127: fruit septum development	0.00E+00
2	GO:0070125: mitochondrial translational elongation	0.00E+00
3	GO:0061157: mRNA destabilization	0.00E+00
4	GO:0045014: negative regulation of transcription by glucose	0.00E+00
5	GO:0010422: regulation of brassinosteroid biosynthetic process	0.00E+00
6	GO:0009733: response to auxin	2.75E-13
7	GO:0009734: auxin-activated signaling pathway	2.27E-09
8	GO:0046620: regulation of organ growth	1.03E-06
9	GO:0040008: regulation of growth	1.09E-05
10	GO:0043039: tRNA aminoacylation	1.70E-05
11	GO:0048829: root cap development	1.49E-04
12	GO:0005983: starch catabolic process	2.25E-04
13	GO:0010588: cotyledon vascular tissue pattern formation	2.70E-04
14	GO:0048497: maintenance of floral organ identity	3.03E-04
15	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	5.10E-04
16	GO:0097056: selenocysteinyl-tRNA(Sec) biosynthetic process	6.28E-04
17	GO:0032958: inositol phosphate biosynthetic process	6.28E-04
18	GO:0010480: microsporocyte differentiation	6.28E-04
19	GO:0015904: tetracycline transport	6.28E-04
20	GO:0048016: inositol phosphate-mediated signaling	6.28E-04
21	GO:0006434: seryl-tRNA aminoacylation	6.28E-04
22	GO:0000025: maltose catabolic process	6.28E-04
23	GO:0010493: Lewis a epitope biosynthetic process	6.28E-04
24	GO:0006438: valyl-tRNA aminoacylation	6.28E-04
25	GO:0070509: calcium ion import	6.28E-04
26	GO:0046520: sphingoid biosynthetic process	6.28E-04
27	GO:0006351: transcription, DNA-templated	1.08E-03
28	GO:0009926: auxin polar transport	1.27E-03
29	GO:0006423: cysteinyl-tRNA aminoacylation	1.35E-03
30	GO:0001736: establishment of planar polarity	1.35E-03
31	GO:0080009: mRNA methylation	1.35E-03
32	GO:0009786: regulation of asymmetric cell division	1.35E-03
33	GO:0031648: protein destabilization	1.35E-03
34	GO:2000123: positive regulation of stomatal complex development	1.35E-03
35	GO:0080005: photosystem stoichiometry adjustment	1.35E-03
36	GO:0061062: regulation of nematode larval development	1.35E-03
37	GO:0010583: response to cyclopentenone	1.70E-03
38	GO:0009664: plant-type cell wall organization	1.79E-03
39	GO:0006949: syncytium formation	1.80E-03
40	GO:0009736: cytokinin-activated signaling pathway	2.00E-03
41	GO:0009828: plant-type cell wall loosening	2.00E-03
42	GO:0071398: cellular response to fatty acid	2.23E-03
43	GO:0006065: UDP-glucuronate biosynthetic process	2.23E-03
44	GO:0090506: axillary shoot meristem initiation	2.23E-03
45	GO:1902448: positive regulation of shade avoidance	2.23E-03
46	GO:0010226: response to lithium ion	2.23E-03
47	GO:0016045: detection of bacterium	2.23E-03
48	GO:0007275: multicellular organism development	2.57E-03
49	GO:2000012: regulation of auxin polar transport	2.72E-03
50	GO:0010020: chloroplast fission	3.07E-03
51	GO:0010321: regulation of vegetative phase change	3.23E-03
52	GO:0010371: regulation of gibberellin biosynthetic process	3.23E-03
53	GO:0006020: inositol metabolic process	3.23E-03
54	GO:0051513: regulation of monopolar cell growth	3.23E-03
55	GO:0051639: actin filament network formation	3.23E-03
56	GO:0007276: gamete generation	3.23E-03
57	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	3.23E-03
58	GO:0006424: glutamyl-tRNA aminoacylation	3.23E-03
59	GO:0000160: phosphorelay signal transduction system	3.77E-03
60	GO:0009826: unidimensional cell growth	3.99E-03
61	GO:0051017: actin filament bundle assembly	4.27E-03
62	GO:0042991: transcription factor import into nucleus	4.36E-03
63	GO:0006021: inositol biosynthetic process	4.36E-03
64	GO:0051764: actin crosslink formation	4.36E-03
65	GO:0009765: photosynthesis, light harvesting	4.36E-03
66	GO:2000038: regulation of stomatal complex development	4.36E-03
67	GO:0006865: amino acid transport	4.52E-03
68	GO:0006418: tRNA aminoacylation for protein translation	4.71E-03
69	GO:0003333: amino acid transmembrane transport	5.19E-03
70	GO:0045487: gibberellin catabolic process	5.60E-03
71	GO:0009107: lipoate biosynthetic process	5.60E-03
72	GO:0016123: xanthophyll biosynthetic process	5.60E-03
73	GO:0032957: inositol trisphosphate metabolic process	5.60E-03
74	GO:0010375: stomatal complex patterning	5.60E-03
75	GO:0016131: brassinosteroid metabolic process	5.60E-03
76	GO:0016120: carotene biosynthetic process	5.60E-03
77	GO:0007005: mitochondrion organization	5.69E-03
78	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	6.21E-03
79	GO:0042127: regulation of cell proliferation	6.76E-03
80	GO:0018258: protein O-linked glycosylation via hydroxyproline	6.95E-03
81	GO:0046855: inositol phosphate dephosphorylation	6.95E-03
82	GO:0010405: arabinogalactan protein metabolic process	6.95E-03
83	GO:0010358: leaf shaping	6.95E-03
84	GO:0016554: cytidine to uridine editing	6.95E-03
85	GO:0009913: epidermal cell differentiation	6.95E-03
86	GO:1902456: regulation of stomatal opening	6.95E-03
87	GO:0003006: developmental process involved in reproduction	6.95E-03
88	GO:0071555: cell wall organization	7.00E-03
89	GO:0006694: steroid biosynthetic process	8.41E-03
90	GO:0030488: tRNA methylation	8.41E-03
91	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	8.41E-03
92	GO:0010067: procambium histogenesis	8.41E-03
93	GO:0010305: leaf vascular tissue pattern formation	8.56E-03
94	GO:0009741: response to brassinosteroid	8.56E-03
95	GO:0006470: protein dephosphorylation	9.77E-03
96	GO:0048825: cotyledon development	9.90E-03
97	GO:0010444: guard mother cell differentiation	9.96E-03
98	GO:0000082: G1/S transition of mitotic cell cycle	9.96E-03
99	GO:0030307: positive regulation of cell growth	9.96E-03
100	GO:0048528: post-embryonic root development	9.96E-03
101	GO:1900056: negative regulation of leaf senescence	9.96E-03
102	GO:0030497: fatty acid elongation	9.96E-03
103	GO:0048437: floral organ development	9.96E-03
104	GO:0010098: suspensor development	9.96E-03
105	GO:0016132: brassinosteroid biosynthetic process	1.06E-02
106	GO:0071554: cell wall organization or biogenesis	1.06E-02
107	GO:0006355: regulation of transcription, DNA-templated	1.14E-02
108	GO:0009704: de-etiolation	1.16E-02
109	GO:0010492: maintenance of shoot apical meristem identity	1.16E-02
110	GO:0000105: histidine biosynthetic process	1.16E-02
111	GO:0006402: mRNA catabolic process	1.16E-02
112	GO:0016042: lipid catabolic process	1.17E-02
113	GO:0048574: long-day photoperiodism, flowering	1.34E-02
114	GO:0006526: arginine biosynthetic process	1.34E-02
115	GO:0048589: developmental growth	1.52E-02
116	GO:0051865: protein autoubiquitination	1.52E-02
117	GO:0048507: meristem development	1.52E-02
118	GO:0009624: response to nematode	1.53E-02
119	GO:0009658: chloroplast organization	1.55E-02
120	GO:0005982: starch metabolic process	1.71E-02
121	GO:0009638: phototropism	1.71E-02
122	GO:0006779: porphyrin-containing compound biosynthetic process	1.71E-02
123	GO:1900865: chloroplast RNA modification	1.71E-02
124	GO:0048573: photoperiodism, flowering	1.82E-02
125	GO:0009641: shade avoidance	1.91E-02
126	GO:0009299: mRNA transcription	1.91E-02
127	GO:0006782: protoporphyrinogen IX biosynthetic process	1.91E-02
128	GO:0016311: dephosphorylation	1.92E-02
129	GO:0048481: plant ovule development	2.02E-02
130	GO:0010311: lateral root formation	2.12E-02
131	GO:0009750: response to fructose	2.12E-02
132	GO:0048229: gametophyte development	2.12E-02
133	GO:0048765: root hair cell differentiation	2.12E-02
134	GO:0046856: phosphatidylinositol dephosphorylation	2.12E-02
135	GO:0008285: negative regulation of cell proliferation	2.12E-02
136	GO:0009793: embryo development ending in seed dormancy	2.15E-02
137	GO:0045037: protein import into chloroplast stroma	2.33E-02
138	GO:0010582: floral meristem determinacy	2.33E-02
139	GO:0006790: sulfur compound metabolic process	2.33E-02
140	GO:0012501: programmed cell death	2.33E-02
141	GO:0010152: pollen maturation	2.33E-02
142	GO:0010628: positive regulation of gene expression	2.56E-02
143	GO:0009691: cytokinin biosynthetic process	2.56E-02
144	GO:0006006: glucose metabolic process	2.56E-02
145	GO:2000028: regulation of photoperiodism, flowering	2.56E-02
146	GO:0010075: regulation of meristem growth	2.56E-02
147	GO:0009725: response to hormone	2.56E-02
148	GO:0009767: photosynthetic electron transport chain	2.56E-02
149	GO:0010102: lateral root morphogenesis	2.56E-02
150	GO:0009785: blue light signaling pathway	2.56E-02
151	GO:0010223: secondary shoot formation	2.79E-02
152	GO:0009887: animal organ morphogenesis	2.79E-02
153	GO:0009934: regulation of meristem structural organization	2.79E-02
154	GO:0048467: gynoecium development	2.79E-02
155	GO:0007034: vacuolar transport	2.79E-02
156	GO:0009735: response to cytokinin	2.81E-02
157	GO:0045892: negative regulation of transcription, DNA-templated	2.85E-02
158	GO:0090351: seedling development	3.02E-02
159	GO:0070588: calcium ion transmembrane transport	3.02E-02
160	GO:0046854: phosphatidylinositol phosphorylation	3.02E-02
161	GO:0006631: fatty acid metabolic process	3.04E-02
162	GO:0006636: unsaturated fatty acid biosynthetic process	3.27E-02
163	GO:0006863: purine nucleobase transport	3.27E-02
164	GO:0006833: water transport	3.27E-02
165	GO:0009744: response to sucrose	3.30E-02
166	GO:0007010: cytoskeleton organization	3.52E-02
167	GO:0005992: trehalose biosynthetic process	3.52E-02
168	GO:0051301: cell division	3.76E-02
169	GO:0019953: sexual reproduction	3.77E-02
170	GO:0048511: rhythmic process	4.03E-02
171	GO:0010431: seed maturation	4.03E-02
172	GO:0005975: carbohydrate metabolic process	4.20E-02
173	GO:2000022: regulation of jasmonic acid mediated signaling pathway	4.30E-02
174	GO:0001944: vasculature development	4.57E-02
175	GO:0009693: ethylene biosynthetic process	4.57E-02
176	GO:0071215: cellular response to abscisic acid stimulus	4.57E-02
177	GO:0010082: regulation of root meristem growth	4.57E-02
178	GO:0009686: gibberellin biosynthetic process	4.57E-02
179	GO:0048443: stamen development	4.85E-02
180	GO:0010091: trichome branching	4.85E-02
181	GO:0006284: base-excision repair	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0004401: histidinol-phosphatase activity	0.00E+00
2	GO:0008922: long-chain fatty acid [acyl-carrier-protein] ligase activity	0.00E+00
3	GO:0052834: inositol monophosphate phosphatase activity	0.00E+00
4	GO:0071633: dihydroceramidase activity	0.00E+00
5	GO:0045435: lycopene epsilon cyclase activity	0.00E+00
6	GO:0001872: (1->3)-beta-D-glucan binding	1.18E-04
7	GO:0010011: auxin binding	2.01E-04
8	GO:0052381: tRNA dimethylallyltransferase activity	6.28E-04
9	GO:0004832: valine-tRNA ligase activity	6.28E-04
10	GO:0033857: diphosphoinositol-pentakisphosphate kinase activity	6.28E-04
11	GO:0010347: L-galactose-1-phosphate phosphatase activity	6.28E-04
12	GO:0010012: steroid 22-alpha hydroxylase activity	6.28E-04
13	GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity	6.28E-04
14	GO:0000170: sphingosine hydroxylase activity	6.28E-04
15	GO:0050139: nicotinate-N-glucosyltransferase activity	6.28E-04
16	GO:0000829: inositol heptakisphosphate kinase activity	6.28E-04
17	GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity	6.28E-04
18	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	6.28E-04
19	GO:0005227: calcium activated cation channel activity	6.28E-04
20	GO:0004828: serine-tRNA ligase activity	6.28E-04
21	GO:0046920: alpha-(1->3)-fucosyltransferase activity	6.28E-04
22	GO:0046030: inositol trisphosphate phosphatase activity	6.28E-04
23	GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity	6.28E-04
24	GO:0000828: inositol hexakisphosphate kinase activity	6.28E-04
25	GO:0004134: 4-alpha-glucanotransferase activity	6.28E-04
26	GO:0004818: glutamate-tRNA ligase activity	6.28E-04
27	GO:0019203: carbohydrate phosphatase activity	6.28E-04
28	GO:0017118: lipoyltransferase activity	1.35E-03
29	GO:0045543: gibberellin 2-beta-dioxygenase activity	1.35E-03
30	GO:0043425: bHLH transcription factor binding	1.35E-03
31	GO:0016415: octanoyltransferase activity	1.35E-03
32	GO:0052832: inositol monophosphate 3-phosphatase activity	1.35E-03
33	GO:0004817: cysteine-tRNA ligase activity	1.35E-03
34	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	1.35E-03
35	GO:0008805: carbon-monoxide oxygenase activity	1.35E-03
36	GO:0042284: sphingolipid delta-4 desaturase activity	1.35E-03
37	GO:0008934: inositol monophosphate 1-phosphatase activity	1.35E-03
38	GO:0008493: tetracycline transporter activity	1.35E-03
39	GO:0052833: inositol monophosphate 4-phosphatase activity	1.35E-03
40	GO:0019156: isoamylase activity	1.35E-03
41	GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity	1.35E-03
42	GO:0043621: protein self-association	1.43E-03
43	GO:0000156: phosphorelay response regulator activity	1.85E-03
44	GO:0051015: actin filament binding	1.85E-03
45	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	2.23E-03
46	GO:0003979: UDP-glucose 6-dehydrogenase activity	2.23E-03
47	GO:0003913: DNA photolyase activity	2.23E-03
48	GO:0005515: protein binding	2.63E-03
49	GO:0030247: polysaccharide binding	3.10E-03
50	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	3.23E-03
51	GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed	4.36E-03
52	GO:0010328: auxin influx transmembrane transporter activity	4.36E-03
53	GO:0019199: transmembrane receptor protein kinase activity	4.36E-03
54	GO:0003700: transcription factor activity, sequence-specific DNA binding	4.37E-03
55	GO:0005345: purine nucleobase transmembrane transporter activity	4.71E-03
56	GO:0033612: receptor serine/threonine kinase binding	5.19E-03
57	GO:0005471: ATP:ADP antiporter activity	5.60E-03
58	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	5.60E-03
59	GO:0008725: DNA-3-methyladenine glycosylase activity	5.60E-03
60	GO:1990714: hydroxyproline O-galactosyltransferase activity	6.95E-03
61	GO:0004709: MAP kinase kinase kinase activity	6.95E-03
62	GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity	6.95E-03
63	GO:0004556: alpha-amylase activity	6.95E-03
64	GO:0004812: aminoacyl-tRNA ligase activity	7.33E-03
65	GO:0052689: carboxylic ester hydrolase activity	7.43E-03
66	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	8.41E-03
67	GO:0016832: aldehyde-lyase activity	8.41E-03
68	GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity	8.56E-03
69	GO:0042803: protein homodimerization activity	9.27E-03
70	GO:0009881: photoreceptor activity	9.96E-03
71	GO:0004722: protein serine/threonine phosphatase activity	1.00E-02
72	GO:0015171: amino acid transmembrane transporter activity	1.11E-02
73	GO:0016791: phosphatase activity	1.29E-02
74	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	1.34E-02
75	GO:0008173: RNA methyltransferase activity	1.34E-02
76	GO:0046983: protein dimerization activity	1.37E-02
77	GO:0009055: electron carrier activity	1.39E-02
78	GO:0016413: O-acetyltransferase activity	1.45E-02
79	GO:0008138: protein tyrosine/serine/threonine phosphatase activity	1.52E-02
80	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	1.52E-02
81	GO:0008417: fucosyltransferase activity	1.52E-02
82	GO:0016788: hydrolase activity, acting on ester bonds	1.59E-02
83	GO:0004805: trehalose-phosphatase activity	1.91E-02
84	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.99E-02
85	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	2.33E-02
86	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.33E-02
87	GO:0000049: tRNA binding	2.33E-02
88	GO:0005262: calcium channel activity	2.56E-02
89	GO:0004565: beta-galactosidase activity	2.56E-02
90	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	2.79E-02
91	GO:0004871: signal transducer activity	2.99E-02
92	GO:0004190: aspartic-type endopeptidase activity	3.02E-02
93	GO:0003712: transcription cofactor activity	3.02E-02
94	GO:0008146: sulfotransferase activity	3.02E-02
95	GO:0008017: microtubule binding	3.23E-02
96	GO:0004674: protein serine/threonine kinase activity	3.34E-02
97	GO:0031418: L-ascorbic acid binding	3.52E-02
98	GO:0005528: FK506 binding	3.52E-02
99	GO:0043565: sequence-specific DNA binding	3.69E-02
100	GO:0015293: symporter activity	3.71E-02
101	GO:0004672: protein kinase activity	3.94E-02
102	GO:0051287: NAD binding	3.99E-02
103	GO:0004176: ATP-dependent peptidase activity	4.03E-02
104	GO:0003964: RNA-directed DNA polymerase activity	4.03E-02
105	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	4.30E-02
106	GO:0030570: pectate lyase activity	4.57E-02
107	GO:0003727: single-stranded RNA binding	4.85E-02
108	GO:0003777: microtubule motor activity	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0043224: nuclear SCF ubiquitin ligase complex	0.00E+00
2	GO:0009986: cell surface	7.20E-04
3	GO:0009569: chloroplast starch grain	1.35E-03
4	GO:0031357: integral component of chloroplast inner membrane	1.35E-03
5	GO:0005884: actin filament	2.08E-03
6	GO:0030139: endocytic vesicle	2.23E-03
7	GO:0019897: extrinsic component of plasma membrane	2.23E-03
8	GO:0008287: protein serine/threonine phosphatase complex	2.23E-03
9	GO:0009531: secondary cell wall	3.23E-03
10	GO:0032585: multivesicular body membrane	3.23E-03
11	GO:0032432: actin filament bundle	3.23E-03
12	GO:0046658: anchored component of plasma membrane	3.24E-03
13	GO:0015629: actin cytoskeleton	6.21E-03
14	GO:0005886: plasma membrane	7.49E-03
15	GO:0000815: ESCRT III complex	8.41E-03
16	GO:0031225: anchored component of membrane	1.04E-02
17	GO:0009501: amyloplast	1.16E-02
18	GO:0009570: chloroplast stroma	1.98E-02
19	GO:0005874: microtubule	2.03E-02
20	GO:0090404: pollen tube tip	2.12E-02
21	GO:0009507: chloroplast	2.17E-02
22	GO:0005578: proteinaceous extracellular matrix	2.56E-02
23	GO:0030095: chloroplast photosystem II	2.79E-02
24	GO:0009941: chloroplast envelope	2.96E-02
25	GO:0005875: microtubule associated complex	3.27E-02
26	GO:0005856: cytoskeleton	3.71E-02
27	GO:0009654: photosystem II oxygen evolving complex	3.77E-02
28	GO:0009534: chloroplast thylakoid	4.45E-02