co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G26600

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0043620: regulation of DNA-templated transcription in response to stress	0.00E+00
2	GO:2000378: negative regulation of reactive oxygen species metabolic process	0.00E+00
3	GO:0019427: acetyl-CoA biosynthetic process from acetate	0.00E+00
4	GO:0080149: sucrose induced translational repression	0.00E+00
5	GO:0046865: terpenoid transport	0.00E+00
6	GO:0018063: cytochrome c-heme linkage	0.00E+00
7	GO:1902009: positive regulation of toxin transport	0.00E+00
8	GO:0051553: flavone biosynthetic process	0.00E+00
9	GO:0071985: multivesicular body sorting pathway	0.00E+00
10	GO:0010055: atrichoblast differentiation	0.00E+00
11	GO:0006654: phosphatidic acid biosynthetic process	0.00E+00
12	GO:1902001: fatty acid transmembrane transport	0.00E+00
13	GO:1902289: negative regulation of defense response to oomycetes	0.00E+00
14	GO:0005993: trehalose catabolic process	0.00E+00
15	GO:0051707: response to other organism	4.96E-06
16	GO:0006605: protein targeting	1.86E-05
17	GO:0016559: peroxisome fission	1.86E-05
18	GO:0015031: protein transport	2.20E-05
19	GO:0006623: protein targeting to vacuole	6.50E-05
20	GO:0051607: defense response to virus	1.32E-04
21	GO:0000162: tryptophan biosynthetic process	1.95E-04
22	GO:1900057: positive regulation of leaf senescence	4.03E-04
23	GO:0010230: alternative respiration	4.23E-04
24	GO:0050691: regulation of defense response to virus by host	4.23E-04
25	GO:0006680: glucosylceramide catabolic process	4.23E-04
26	GO:1900384: regulation of flavonol biosynthetic process	4.23E-04
27	GO:0006083: acetate metabolic process	4.23E-04
28	GO:0032107: regulation of response to nutrient levels	4.23E-04
29	GO:1990641: response to iron ion starvation	4.23E-04
30	GO:0006631: fatty acid metabolic process	4.52E-04
31	GO:0006102: isocitrate metabolic process	5.03E-04
32	GO:0042742: defense response to bacterium	5.49E-04
33	GO:0010112: regulation of systemic acquired resistance	7.36E-04
34	GO:0008202: steroid metabolic process	8.68E-04
35	GO:0018315: molybdenum incorporation into molybdenum-molybdopterin complex	9.16E-04
36	GO:0015908: fatty acid transport	9.16E-04
37	GO:0006101: citrate metabolic process	9.16E-04
38	GO:0000719: photoreactive repair	9.16E-04
39	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	9.16E-04
40	GO:0015012: heparan sulfate proteoglycan biosynthetic process	9.16E-04
41	GO:0071668: plant-type cell wall assembly	9.16E-04
42	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	9.16E-04
43	GO:0006024: glycosaminoglycan biosynthetic process	9.16E-04
44	GO:0055088: lipid homeostasis	9.16E-04
45	GO:0042853: L-alanine catabolic process	9.16E-04
46	GO:0045037: protein import into chloroplast stroma	1.33E-03
47	GO:0000266: mitochondrial fission	1.33E-03
48	GO:0080168: abscisic acid transport	1.49E-03
49	GO:0006048: UDP-N-acetylglucosamine biosynthetic process	1.49E-03
50	GO:0043328: protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway	1.49E-03
51	GO:0061158: 3'-UTR-mediated mRNA destabilization	1.49E-03
52	GO:0080163: regulation of protein serine/threonine phosphatase activity	1.49E-03
53	GO:0044375: regulation of peroxisome size	1.49E-03
54	GO:0071398: cellular response to fatty acid	1.49E-03
55	GO:0006065: UDP-glucuronate biosynthetic process	1.49E-03
56	GO:0010476: gibberellin mediated signaling pathway	1.49E-03
57	GO:0010325: raffinose family oligosaccharide biosynthetic process	1.49E-03
58	GO:0009410: response to xenobiotic stimulus	1.49E-03
59	GO:0015692: lead ion transport	1.49E-03
60	GO:0052546: cell wall pectin metabolic process	1.49E-03
61	GO:0002237: response to molecule of bacterial origin	1.70E-03
62	GO:0090351: seedling development	1.91E-03
63	GO:0071323: cellular response to chitin	2.15E-03
64	GO:0080024: indolebutyric acid metabolic process	2.15E-03
65	GO:0055070: copper ion homeostasis	2.15E-03
66	GO:0001676: long-chain fatty acid metabolic process	2.15E-03
67	GO:0070301: cellular response to hydrogen peroxide	2.15E-03
68	GO:0051639: actin filament network formation	2.15E-03
69	GO:0002239: response to oomycetes	2.15E-03
70	GO:0030150: protein import into mitochondrial matrix	2.36E-03
71	GO:0006099: tricarboxylic acid cycle	2.37E-03
72	GO:1901002: positive regulation of response to salt stress	2.89E-03
73	GO:0015867: ATP transport	2.89E-03
74	GO:0009939: positive regulation of gibberellic acid mediated signaling pathway	2.89E-03
75	GO:0051764: actin crosslink formation	2.89E-03
76	GO:0006621: protein retention in ER lumen	2.89E-03
77	GO:0071456: cellular response to hypoxia	3.13E-03
78	GO:0006886: intracellular protein transport	3.15E-03
79	GO:0009411: response to UV	3.42E-03
80	GO:0009636: response to toxic substance	3.59E-03
81	GO:0046283: anthocyanin-containing compound metabolic process	3.71E-03
82	GO:0097428: protein maturation by iron-sulfur cluster transfer	3.71E-03
83	GO:0006097: glyoxylate cycle	3.71E-03
84	GO:0009229: thiamine diphosphate biosynthetic process	3.71E-03
85	GO:0009617: response to bacterium	4.18E-03
86	GO:0009751: response to salicylic acid	4.20E-03
87	GO:1900425: negative regulation of defense response to bacterium	4.59E-03
88	GO:0009228: thiamine biosynthetic process	4.59E-03
89	GO:0006014: D-ribose metabolic process	4.59E-03
90	GO:0015866: ADP transport	4.59E-03
91	GO:0006777: Mo-molybdopterin cofactor biosynthetic process	4.59E-03
92	GO:0010256: endomembrane system organization	4.59E-03
93	GO:0006979: response to oxidative stress	5.05E-03
94	GO:0017148: negative regulation of translation	5.53E-03
95	GO:0048444: floral organ morphogenesis	5.53E-03
96	GO:0030643: cellular phosphate ion homeostasis	5.53E-03
97	GO:0002229: defense response to oomycetes	5.80E-03
98	GO:0010193: response to ozone	5.80E-03
99	GO:0009620: response to fungus	6.33E-03
100	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	6.54E-03
101	GO:0000122: negative regulation of transcription from RNA polymerase II promoter	6.54E-03
102	GO:0006333: chromatin assembly or disassembly	6.54E-03
103	GO:0010044: response to aluminum ion	6.54E-03
104	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	7.60E-03
105	GO:0009819: drought recovery	7.60E-03
106	GO:0009850: auxin metabolic process	7.60E-03
107	GO:0045010: actin nucleation	7.60E-03
108	GO:0031540: regulation of anthocyanin biosynthetic process	7.60E-03
109	GO:0006997: nucleus organization	8.73E-03
110	GO:0010204: defense response signaling pathway, resistance gene-independent	8.73E-03
111	GO:0017004: cytochrome complex assembly	8.73E-03
112	GO:0010208: pollen wall assembly	8.73E-03
113	GO:0009816: defense response to bacterium, incompatible interaction	8.89E-03
114	GO:0016192: vesicle-mediated transport	9.31E-03
115	GO:0009627: systemic acquired resistance	9.40E-03
116	GO:0009056: catabolic process	9.92E-03
117	GO:0000902: cell morphogenesis	9.92E-03
118	GO:0009835: fruit ripening	9.92E-03
119	GO:0007338: single fertilization	9.92E-03
120	GO:0009086: methionine biosynthetic process	1.12E-02
121	GO:0009870: defense response signaling pathway, resistance gene-dependent	1.24E-02
122	GO:0000103: sulfate assimilation	1.24E-02
123	GO:0009688: abscisic acid biosynthetic process	1.24E-02
124	GO:0051555: flavonol biosynthetic process	1.24E-02
125	GO:0019684: photosynthesis, light reaction	1.38E-02
126	GO:0009684: indoleacetic acid biosynthetic process	1.38E-02
127	GO:0010150: leaf senescence	1.43E-02
128	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	1.52E-02
129	GO:0030036: actin cytoskeleton organization	1.66E-02
130	GO:0055046: microgametogenesis	1.66E-02
131	GO:2000012: regulation of auxin polar transport	1.66E-02
132	GO:0007015: actin filament organization	1.81E-02
133	GO:0000209: protein polyubiquitination	1.88E-02
134	GO:0007033: vacuole organization	1.96E-02
135	GO:0007031: peroxisome organization	1.96E-02
136	GO:0007275: multicellular organism development	2.09E-02
137	GO:0006855: drug transmembrane transport	2.11E-02
138	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	2.19E-02
139	GO:0009846: pollen germination	2.27E-02
140	GO:0000027: ribosomal large subunit assembly	2.29E-02
141	GO:0009863: salicylic acid mediated signaling pathway	2.29E-02
142	GO:0051017: actin filament bundle assembly	2.29E-02
143	GO:0006289: nucleotide-excision repair	2.29E-02
144	GO:0051302: regulation of cell division	2.45E-02
145	GO:0006874: cellular calcium ion homeostasis	2.45E-02
146	GO:0010224: response to UV-B	2.52E-02
147	GO:0006334: nucleosome assembly	2.62E-02
148	GO:0009269: response to desiccation	2.62E-02
149	GO:0006970: response to osmotic stress	2.73E-02
150	GO:0016226: iron-sulfur cluster assembly	2.80E-02
151	GO:0030433: ubiquitin-dependent ERAD pathway	2.80E-02
152	GO:0007005: mitochondrion organization	2.80E-02
153	GO:0031348: negative regulation of defense response	2.80E-02
154	GO:0009814: defense response, incompatible interaction	2.80E-02
155	GO:0009693: ethylene biosynthetic process	2.98E-02
156	GO:0006012: galactose metabolic process	2.98E-02
157	GO:0009561: megagametogenesis	3.16E-02
158	GO:0042147: retrograde transport, endosome to Golgi	3.34E-02
159	GO:0010200: response to chitin	3.39E-02
160	GO:0010118: stomatal movement	3.54E-02
161	GO:0006520: cellular amino acid metabolic process	3.73E-02
162	GO:0006662: glycerol ether metabolic process	3.73E-02
163	GO:0010182: sugar mediated signaling pathway	3.73E-02
164	GO:0019252: starch biosynthetic process	4.13E-02
165	GO:0071554: cell wall organization or biogenesis	4.33E-02
166	GO:0000302: response to reactive oxygen species	4.33E-02
167	GO:0006891: intra-Golgi vesicle-mediated transport	4.33E-02
168	GO:0006635: fatty acid beta-oxidation	4.33E-02
169	GO:0016032: viral process	4.54E-02
170	GO:0006869: lipid transport	4.54E-02
171	GO:0032502: developmental process	4.54E-02
172	GO:0009058: biosynthetic process	4.56E-02
173	GO:0030163: protein catabolic process	4.75E-02
174	GO:0009567: double fertilization forming a zygote and endosperm	4.96E-02

Rank	GO Term	Adjusted P value
1	GO:0052684: L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity	0.00E+00
2	GO:0102867: molybdenum cofactor sulfurtransferase activity	0.00E+00
3	GO:0050334: thiaminase activity	0.00E+00
4	GO:0004555: alpha,alpha-trehalase activity	0.00E+00
5	GO:0005046: KDEL sequence binding	0.00E+00
6	GO:0034338: short-chain carboxylesterase activity	0.00E+00
7	GO:0033759: flavone synthase activity	0.00E+00
8	GO:0004610: phosphoacetylglucosamine mutase activity	0.00E+00
9	GO:0004834: tryptophan synthase activity	1.05E-04
10	GO:0102391: decanoate--CoA ligase activity	3.12E-04
11	GO:0008320: protein transmembrane transporter activity	4.03E-04
12	GO:0004467: long-chain fatty acid-CoA ligase activity	4.03E-04
13	GO:0032266: phosphatidylinositol-3-phosphate binding	4.23E-04
14	GO:0004348: glucosylceramidase activity	4.23E-04
15	GO:0030942: endoplasmic reticulum signal peptide binding	4.23E-04
16	GO:0047150: betaine-homocysteine S-methyltransferase activity	4.23E-04
17	GO:0009000: selenocysteine lyase activity	4.23E-04
18	GO:0015245: fatty acid transporter activity	4.23E-04
19	GO:0016920: pyroglutamyl-peptidase activity	4.23E-04
20	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	4.23E-04
21	GO:0016229: steroid dehydrogenase activity	4.23E-04
22	GO:0003987: acetate-CoA ligase activity	4.23E-04
23	GO:0004425: indole-3-glycerol-phosphate synthase activity	4.23E-04
24	GO:0015927: trehalase activity	4.23E-04
25	GO:0070401: NADP+ binding	4.23E-04
26	GO:0047893: flavonol 3-O-glucosyltransferase activity	5.03E-04
27	GO:0008142: oxysterol binding	6.14E-04
28	GO:0050736: O-malonyltransferase activity	9.16E-04
29	GO:0015036: disulfide oxidoreductase activity	9.16E-04
30	GO:0010331: gibberellin binding	9.16E-04
31	GO:0003994: aconitate hydratase activity	9.16E-04
32	GO:0000774: adenyl-nucleotide exchange factor activity	9.16E-04
33	GO:0032934: sterol binding	9.16E-04
34	GO:0032403: protein complex binding	1.49E-03
35	GO:0003979: UDP-glucose 6-dehydrogenase activity	1.49E-03
36	GO:0008265: Mo-molybdopterin cofactor sulfurase activity	1.49E-03
37	GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity	1.49E-03
38	GO:0043169: cation binding	1.49E-03
39	GO:0035529: NADH pyrophosphatase activity	2.15E-03
40	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	2.15E-03
41	GO:0030527: structural constituent of chromatin	2.15E-03
42	GO:0004449: isocitrate dehydrogenase (NAD+) activity	2.15E-03
43	GO:0010178: IAA-amino acid conjugate hydrolase activity	2.15E-03
44	GO:0016656: monodehydroascorbate reductase (NADH) activity	2.15E-03
45	GO:0008106: alcohol dehydrogenase (NADP+) activity	2.15E-03
46	GO:0030170: pyridoxal phosphate binding	2.29E-03
47	GO:0051536: iron-sulfur cluster binding	2.36E-03
48	GO:0031418: L-ascorbic acid binding	2.36E-03
49	GO:0035251: UDP-glucosyltransferase activity	2.86E-03
50	GO:0046923: ER retention sequence binding	2.89E-03
51	GO:0042803: protein homodimerization activity	3.23E-03
52	GO:0005198: structural molecule activity	3.59E-03
53	GO:0004623: phospholipase A2 activity	3.71E-03
54	GO:0047631: ADP-ribose diphosphatase activity	3.71E-03
55	GO:0030151: molybdenum ion binding	3.71E-03
56	GO:0000210: NAD+ diphosphatase activity	4.59E-03
57	GO:0016208: AMP binding	4.59E-03
58	GO:0004747: ribokinase activity	5.53E-03
59	GO:0005347: ATP transmembrane transporter activity	5.53E-03
60	GO:0003978: UDP-glucose 4-epimerase activity	5.53E-03
61	GO:0004656: procollagen-proline 4-dioxygenase activity	5.53E-03
62	GO:0015217: ADP transmembrane transporter activity	5.53E-03
63	GO:0102425: myricetin 3-O-glucosyltransferase activity	6.54E-03
64	GO:0102360: daphnetin 3-O-glucosyltransferase activity	6.54E-03
65	GO:0008483: transaminase activity	7.48E-03
66	GO:0052747: sinapyl alcohol dehydrogenase activity	7.60E-03
67	GO:0004033: aldo-keto reductase (NADP) activity	7.60E-03
68	GO:0004869: cysteine-type endopeptidase inhibitor activity	7.60E-03
69	GO:0008865: fructokinase activity	7.60E-03
70	GO:0008312: 7S RNA binding	7.60E-03
71	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	9.81E-03
72	GO:0004806: triglyceride lipase activity	9.92E-03
73	GO:0030247: polysaccharide binding	9.92E-03
74	GO:0008138: protein tyrosine/serine/threonine phosphatase activity	9.92E-03
75	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	9.92E-03
76	GO:0005509: calcium ion binding	1.22E-02
77	GO:0004864: protein phosphatase inhibitor activity	1.24E-02
78	GO:0030234: enzyme regulator activity	1.24E-02
79	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.40E-02
80	GO:0045551: cinnamyl-alcohol dehydrogenase activity	1.52E-02
81	GO:0051539: 4 iron, 4 sulfur cluster binding	1.60E-02
82	GO:0004022: alcohol dehydrogenase (NAD) activity	1.66E-02
83	GO:0042802: identical protein binding	1.94E-02
84	GO:0008061: chitin binding	1.96E-02
85	GO:0003712: transcription cofactor activity	1.96E-02
86	GO:0004970: ionotropic glutamate receptor activity	1.96E-02
87	GO:0005217: intracellular ligand-gated ion channel activity	1.96E-02
88	GO:0004725: protein tyrosine phosphatase activity	2.12E-02
89	GO:0051287: NAD binding	2.19E-02
90	GO:0001046: core promoter sequence-specific DNA binding	2.29E-02
91	GO:0043130: ubiquitin binding	2.29E-02
92	GO:0051087: chaperone binding	2.45E-02
93	GO:0003682: chromatin binding	2.66E-02
94	GO:0008810: cellulase activity	2.98E-02
95	GO:0016887: ATPase activity	2.98E-02
96	GO:0004499: N,N-dimethylaniline monooxygenase activity	3.16E-02
97	GO:0003727: single-stranded RNA binding	3.16E-02
98	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.17E-02
99	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.17E-02
100	GO:0004497: monooxygenase activity	3.25E-02
101	GO:0047134: protein-disulfide reductase activity	3.34E-02
102	GO:0005102: receptor binding	3.34E-02
103	GO:0015035: protein disulfide oxidoreductase activity	3.57E-02
104	GO:0050662: coenzyme binding	3.93E-02
105	GO:0004791: thioredoxin-disulfide reductase activity	3.93E-02
106	GO:0004872: receptor activity	4.13E-02
107	GO:0016758: transferase activity, transferring hexosyl groups	4.22E-02
108	GO:0005215: transporter activity	4.55E-02
109	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	4.75E-02
110	GO:0051015: actin filament binding	4.75E-02
111	GO:0016740: transferase activity	4.83E-02
112	GO:0016791: phosphatase activity	4.96E-02

Rank	GO Term	Adjusted P value
1	GO:0005794: Golgi apparatus	1.80E-05
2	GO:0005789: endoplasmic reticulum membrane	4.89E-05
3	GO:0017119: Golgi transport complex	6.17E-05
4	GO:0016021: integral component of membrane	1.58E-04
5	GO:0005801: cis-Golgi network	3.12E-04
6	GO:0045252: oxoglutarate dehydrogenase complex	4.23E-04
7	GO:0001405: presequence translocase-associated import motor	4.23E-04
8	GO:0005779: integral component of peroxisomal membrane	6.14E-04
9	GO:0005829: cytosol	6.34E-04
10	GO:0030665: clathrin-coated vesicle membrane	8.68E-04
11	GO:0031314: extrinsic component of mitochondrial inner membrane	9.16E-04
12	GO:0030134: ER to Golgi transport vesicle	9.16E-04
13	GO:0000814: ESCRT II complex	9.16E-04
14	GO:0005778: peroxisomal membrane	1.02E-03
15	GO:0042406: extrinsic component of endoplasmic reticulum membrane	1.49E-03
16	GO:0030658: transport vesicle membrane	2.15E-03
17	GO:0032432: actin filament bundle	2.15E-03
18	GO:0031902: late endosome membrane	2.79E-03
19	GO:0005741: mitochondrial outer membrane	2.86E-03
20	GO:0005783: endoplasmic reticulum	3.61E-03
21	GO:0000813: ESCRT I complex	3.71E-03
22	GO:0000164: protein phosphatase type 1 complex	3.71E-03
23	GO:0005743: mitochondrial inner membrane	3.79E-03
24	GO:0005777: peroxisome	4.71E-03
25	GO:0031965: nuclear membrane	5.42E-03
26	GO:0005885: Arp2/3 protein complex	5.53E-03
27	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	6.54E-03
28	GO:0009986: cell surface	6.54E-03
29	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	8.73E-03
30	GO:0009514: glyoxysome	8.73E-03
31	GO:0005623: cell	9.81E-03
32	GO:0008540: proteasome regulatory particle, base subcomplex	1.12E-02
33	GO:0005774: vacuolar membrane	1.31E-02
34	GO:0005884: actin filament	1.38E-02
35	GO:0046658: anchored component of plasma membrane	2.04E-02
36	GO:0005769: early endosome	2.12E-02
37	GO:0005886: plasma membrane	2.27E-02
38	GO:0031225: anchored component of membrane	2.51E-02
39	GO:0009506: plasmodesma	2.60E-02
40	GO:0005802: trans-Golgi network	2.62E-02
41	GO:0005744: mitochondrial inner membrane presequence translocase complex	3.16E-02
42	GO:0009706: chloroplast inner membrane	3.47E-02
43	GO:0005770: late endosome	3.73E-02
44	GO:0009504: cell plate	4.13E-02
45	GO:0019898: extrinsic component of membrane	4.13E-02
46	GO:0009543: chloroplast thylakoid lumen	4.33E-02
47	GO:0000785: chromatin	4.54E-02
48	GO:0032580: Golgi cisterna membrane	4.96E-02