co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G26490

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0080127: fruit septum development	0.00E+00
2	GO:0046486: glycerolipid metabolic process	0.00E+00
3	GO:0006907: pinocytosis	0.00E+00
4	GO:0006437: tyrosyl-tRNA aminoacylation	0.00E+00
5	GO:0045014: negative regulation of transcription by glucose	0.00E+00
6	GO:0070455: positive regulation of heme biosynthetic process	0.00E+00
7	GO:0070921: regulation of production of siRNA involved in chromatin silencing by small RNA	0.00E+00
8	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.57E-04
9	GO:0007050: cell cycle arrest	2.76E-04
10	GO:0010070: zygote asymmetric cell division	3.29E-04
11	GO:0034757: negative regulation of iron ion transport	3.29E-04
12	GO:0045786: negative regulation of cell cycle	3.29E-04
13	GO:0010726: positive regulation of hydrogen peroxide metabolic process	3.29E-04
14	GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic	3.29E-04
15	GO:0007186: G-protein coupled receptor signaling pathway	4.26E-04
16	GO:0000373: Group II intron splicing	5.12E-04
17	GO:0010271: regulation of chlorophyll catabolic process	7.18E-04
18	GO:0043039: tRNA aminoacylation	7.18E-04
19	GO:0010069: zygote asymmetric cytokinesis in embryo sac	7.18E-04
20	GO:0080175: phragmoplast microtubule organization	7.18E-04
21	GO:0006650: glycerophospholipid metabolic process	7.18E-04
22	GO:0080117: secondary growth	1.16E-03
23	GO:0006518: peptide metabolic process	1.16E-03
24	GO:0042780: tRNA 3'-end processing	1.16E-03
25	GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic	1.16E-03
26	GO:0034090: maintenance of meiotic sister chromatid cohesion	1.16E-03
27	GO:0046168: glycerol-3-phosphate catabolic process	1.16E-03
28	GO:0006863: purine nucleobase transport	1.47E-03
29	GO:0033014: tetrapyrrole biosynthetic process	1.67E-03
30	GO:0045017: glycerolipid biosynthetic process	1.67E-03
31	GO:0006072: glycerol-3-phosphate metabolic process	1.67E-03
32	GO:0006021: inositol biosynthetic process	2.24E-03
33	GO:0009956: radial pattern formation	2.24E-03
34	GO:0006364: rRNA processing	2.81E-03
35	GO:0051225: spindle assembly	2.87E-03
36	GO:0009696: salicylic acid metabolic process	2.87E-03
37	GO:0009958: positive gravitropism	3.23E-03
38	GO:0009658: chloroplast organization	3.50E-03
39	GO:0048831: regulation of shoot system development	3.54E-03
40	GO:0003006: developmental process involved in reproduction	3.54E-03
41	GO:0010942: positive regulation of cell death	3.54E-03
42	GO:0045736: negative regulation of cyclin-dependent protein serine/threonine kinase activity	3.54E-03
43	GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	3.54E-03
44	GO:0002229: defense response to oomycetes	3.98E-03
45	GO:0048509: regulation of meristem development	4.26E-03
46	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	4.26E-03
47	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	5.03E-03
48	GO:0006401: RNA catabolic process	5.03E-03
49	GO:0009610: response to symbiotic fungus	5.03E-03
50	GO:0000105: histidine biosynthetic process	5.85E-03
51	GO:0048564: photosystem I assembly	5.85E-03
52	GO:0045292: mRNA cis splicing, via spliceosome	5.85E-03
53	GO:0009627: systemic acquired resistance	6.44E-03
54	GO:0032544: plastid translation	6.71E-03
55	GO:0009657: plastid organization	6.71E-03
56	GO:0051865: protein autoubiquitination	7.60E-03
57	GO:0006783: heme biosynthetic process	7.60E-03
58	GO:0048589: developmental growth	7.60E-03
59	GO:0009056: catabolic process	7.60E-03
60	GO:0048507: meristem development	7.60E-03
61	GO:0006468: protein phosphorylation	7.65E-03
62	GO:0000160: phosphorelay signal transduction system	7.91E-03
63	GO:0006811: ion transport	8.30E-03
64	GO:1900865: chloroplast RNA modification	8.55E-03
65	GO:0009451: RNA modification	9.10E-03
66	GO:0048829: root cap development	9.53E-03
67	GO:0010192: mucilage biosynthetic process	9.53E-03
68	GO:0009089: lysine biosynthetic process via diaminopimelate	1.06E-02
69	GO:0016485: protein processing	1.06E-02
70	GO:0010152: pollen maturation	1.16E-02
71	GO:0006790: sulfur compound metabolic process	1.16E-02
72	GO:0005983: starch catabolic process	1.16E-02
73	GO:0045037: protein import into chloroplast stroma	1.16E-02
74	GO:0010582: floral meristem determinacy	1.16E-02
75	GO:0009718: anthocyanin-containing compound biosynthetic process	1.27E-02
76	GO:0009767: photosynthetic electron transport chain	1.27E-02
77	GO:0010588: cotyledon vascular tissue pattern formation	1.27E-02
78	GO:0042546: cell wall biogenesis	1.28E-02
79	GO:0010207: photosystem II assembly	1.38E-02
80	GO:0009887: animal organ morphogenesis	1.38E-02
81	GO:0010540: basipetal auxin transport	1.38E-02
82	GO:0006302: double-strand break repair	1.38E-02
83	GO:0048768: root hair cell tip growth	1.38E-02
84	GO:0048467: gynoecium development	1.38E-02
85	GO:0010020: chloroplast fission	1.38E-02
86	GO:0009933: meristem structural organization	1.38E-02
87	GO:0046854: phosphatidylinositol phosphorylation	1.50E-02
88	GO:0009825: multidimensional cell growth	1.50E-02
89	GO:0080188: RNA-directed DNA methylation	1.50E-02
90	GO:0009833: plant-type primary cell wall biogenesis	1.62E-02
91	GO:0009736: cytokinin-activated signaling pathway	1.67E-02
92	GO:0080147: root hair cell development	1.75E-02
93	GO:0006418: tRNA aminoacylation for protein translation	1.87E-02
94	GO:0006874: cellular calcium ion homeostasis	1.87E-02
95	GO:0051321: meiotic cell cycle	2.00E-02
96	GO:0003333: amino acid transmembrane transport	2.00E-02
97	GO:0006306: DNA methylation	2.00E-02
98	GO:0009416: response to light stimulus	2.08E-02
99	GO:0016226: iron-sulfur cluster assembly	2.14E-02
100	GO:0071215: cellular response to abscisic acid stimulus	2.27E-02
101	GO:0009686: gibberellin biosynthetic process	2.27E-02
102	GO:0051301: cell division	2.37E-02
103	GO:0048443: stamen development	2.41E-02
104	GO:0006284: base-excision repair	2.41E-02
105	GO:0070417: cellular response to cold	2.55E-02
106	GO:0000271: polysaccharide biosynthetic process	2.70E-02
107	GO:0010087: phloem or xylem histogenesis	2.70E-02
108	GO:0048653: anther development	2.70E-02
109	GO:0045489: pectin biosynthetic process	2.85E-02
110	GO:0010305: leaf vascular tissue pattern formation	2.85E-02
111	GO:0008654: phospholipid biosynthetic process	3.15E-02
112	GO:0009791: post-embryonic development	3.15E-02
113	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	3.31E-02
114	GO:0009793: embryo development ending in seed dormancy	3.37E-02
115	GO:0010583: response to cyclopentenone	3.47E-02
116	GO:0031047: gene silencing by RNA	3.47E-02
117	GO:0019761: glucosinolate biosynthetic process	3.47E-02
118	GO:1901657: glycosyl compound metabolic process	3.63E-02
119	GO:0016310: phosphorylation	3.75E-02
120	GO:0009639: response to red or far red light	3.79E-02
121	GO:0040008: regulation of growth	3.92E-02
122	GO:0005975: carbohydrate metabolic process	4.11E-02
123	GO:0000910: cytokinesis	4.13E-02
124	GO:0016126: sterol biosynthetic process	4.30E-02
125	GO:0010029: regulation of seed germination	4.47E-02
126	GO:0006974: cellular response to DNA damage stimulus	4.65E-02
127	GO:0010411: xyloglucan metabolic process	4.82E-02
128	GO:0015995: chlorophyll biosynthetic process	4.82E-02

Rank	GO Term	Adjusted P value
1	GO:0047793: cycloeucalenol cycloisomerase activity	0.00E+00
2	GO:0052834: inositol monophosphate phosphatase activity	0.00E+00
3	GO:0008859: exoribonuclease II activity	0.00E+00
4	GO:0004401: histidinol-phosphatase activity	0.00E+00
5	GO:0080062: cytokinin 9-beta-glucosyltransferase activity	3.29E-04
6	GO:0010347: L-galactose-1-phosphate phosphatase activity	3.29E-04
7	GO:0047807: cytokinin 7-beta-glucosyltransferase activity	3.29E-04
8	GO:0008836: diaminopimelate decarboxylase activity	3.29E-04
9	GO:0004831: tyrosine-tRNA ligase activity	3.29E-04
10	GO:0019156: isoamylase activity	7.18E-04
11	GO:0010296: prenylcysteine methylesterase activity	7.18E-04
12	GO:0004047: aminomethyltransferase activity	7.18E-04
13	GO:0052832: inositol monophosphate 3-phosphatase activity	7.18E-04
14	GO:0008805: carbon-monoxide oxygenase activity	7.18E-04
15	GO:0008934: inositol monophosphate 1-phosphatase activity	7.18E-04
16	GO:0052833: inositol monophosphate 4-phosphatase activity	7.18E-04
17	GO:0009884: cytokinin receptor activity	7.18E-04
18	GO:0005034: osmosensor activity	1.16E-03
19	GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity	1.16E-03
20	GO:0016707: gibberellin 3-beta-dioxygenase activity	1.16E-03
21	GO:0042781: 3'-tRNA processing endoribonuclease activity	1.16E-03
22	GO:0080031: methyl salicylate esterase activity	1.67E-03
23	GO:0005345: purine nucleobase transmembrane transporter activity	1.80E-03
24	GO:0004540: ribonuclease activity	1.97E-03
25	GO:0010011: auxin binding	2.24E-03
26	GO:0010328: auxin influx transmembrane transporter activity	2.24E-03
27	GO:0043495: protein anchor	2.24E-03
28	GO:0004930: G-protein coupled receptor activity	2.24E-03
29	GO:0008725: DNA-3-methyladenine glycosylase activity	2.87E-03
30	GO:0030332: cyclin binding	3.54E-03
31	GO:0004556: alpha-amylase activity	3.54E-03
32	GO:0004462: lactoylglutathione lyase activity	3.54E-03
33	GO:0080030: methyl indole-3-acetate esterase activity	3.54E-03
34	GO:0004861: cyclin-dependent protein serine/threonine kinase inhibitor activity	3.54E-03
35	GO:0016301: kinase activity	4.09E-03
36	GO:0019900: kinase binding	4.26E-03
37	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	4.26E-03
38	GO:0016759: cellulose synthase activity	4.83E-03
39	GO:0004674: protein serine/threonine kinase activity	5.12E-03
40	GO:0004871: signal transducer activity	6.85E-03
41	GO:0004222: metalloendopeptidase activity	8.30E-03
42	GO:0004673: protein histidine kinase activity	9.53E-03
43	GO:0000155: phosphorelay sensor kinase activity	1.27E-02
44	GO:0000175: 3'-5'-exoribonuclease activity	1.27E-02
45	GO:0043621: protein self-association	1.34E-02
46	GO:0004535: poly(A)-specific ribonuclease activity	1.38E-02
47	GO:0004970: ionotropic glutamate receptor activity	1.50E-02
48	GO:0005217: intracellular ligand-gated ion channel activity	1.50E-02
49	GO:0008134: transcription factor binding	1.75E-02
50	GO:0043424: protein histidine kinase binding	1.87E-02
51	GO:0008408: 3'-5' exonuclease activity	2.00E-02
52	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	2.14E-02
53	GO:0030570: pectate lyase activity	2.27E-02
54	GO:0016760: cellulose synthase (UDP-forming) activity	2.27E-02
55	GO:0004812: aminoacyl-tRNA ligase activity	2.55E-02
56	GO:0010181: FMN binding	3.00E-02
57	GO:0019901: protein kinase binding	3.15E-02
58	GO:0016762: xyloglucan:xyloglucosyl transferase activity	3.31E-02
59	GO:0046983: protein dimerization activity	3.33E-02
60	GO:0000156: phosphorelay response regulator activity	3.63E-02
61	GO:0004519: endonuclease activity	3.66E-02
62	GO:0004672: protein kinase activity	3.90E-02
63	GO:0008237: metallopeptidase activity	3.96E-02
64	GO:0051213: dioxygenase activity	4.30E-02
65	GO:0016798: hydrolase activity, acting on glycosyl bonds	4.82E-02
66	GO:0102483: scopolin beta-glucosidase activity	4.82E-02

Rank	GO Term	Adjusted P value
1	GO:0043224: nuclear SCF ubiquitin ligase complex	0.00E+00
2	GO:0035452: extrinsic component of plastid membrane	0.00E+00
3	GO:0000791: euchromatin	3.29E-04
4	GO:0030870: Mre11 complex	7.18E-04
5	GO:0009569: chloroplast starch grain	7.18E-04
6	GO:0070652: HAUS complex	1.16E-03
7	GO:0009331: glycerol-3-phosphate dehydrogenase complex	1.67E-03
8	GO:0000178: exosome (RNase complex)	2.87E-03
9	GO:0000795: synaptonemal complex	2.87E-03
10	GO:0009707: chloroplast outer membrane	7.52E-03
11	GO:0042644: chloroplast nucleoid	7.60E-03
12	GO:0009507: chloroplast	1.03E-02
13	GO:0016602: CCAAT-binding factor complex	1.27E-02
14	GO:0005875: microtubule associated complex	1.62E-02
15	GO:0000419: DNA-directed RNA polymerase V complex	1.62E-02
16	GO:0043234: protein complex	1.62E-02
17	GO:0009570: chloroplast stroma	2.44E-02
18	GO:0009504: cell plate	3.15E-02
19	GO:0016592: mediator complex	3.47E-02
20	GO:0000785: chromatin	3.47E-02
21	GO:0071944: cell periphery	3.63E-02
22	GO:0005739: mitochondrion	3.86E-02
23	GO:0010319: stromule	3.96E-02
24	GO:0000932: P-body	4.30E-02