co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G26090

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0046865: terpenoid transport	0.00E+00
2	GO:0009312: oligosaccharide biosynthetic process	0.00E+00
3	GO:0010055: atrichoblast differentiation	0.00E+00
4	GO:0090359: negative regulation of abscisic acid biosynthetic process	0.00E+00
5	GO:0043620: regulation of DNA-templated transcription in response to stress	0.00E+00
6	GO:0071456: cellular response to hypoxia	6.67E-07
7	GO:0010200: response to chitin	1.09E-05
8	GO:0009751: response to salicylic acid	2.79E-05
9	GO:0009643: photosynthetic acclimation	3.80E-05
10	GO:0050691: regulation of defense response to virus by host	1.37E-04
11	GO:1990542: mitochondrial transmembrane transport	1.37E-04
12	GO:0032107: regulation of response to nutrient levels	1.37E-04
13	GO:0015760: glucose-6-phosphate transport	1.37E-04
14	GO:1990641: response to iron ion starvation	1.37E-04
15	GO:0019567: arabinose biosynthetic process	1.37E-04
16	GO:0033306: phytol metabolic process	1.37E-04
17	GO:0010112: regulation of systemic acquired resistance	1.44E-04
18	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	1.73E-04
19	GO:0044419: interspecies interaction between organisms	3.16E-04
20	GO:0015712: hexose phosphate transport	3.16E-04
21	GO:0010115: regulation of abscisic acid biosynthetic process	3.16E-04
22	GO:0006101: citrate metabolic process	3.16E-04
23	GO:0000719: photoreactive repair	3.16E-04
24	GO:0015865: purine nucleotide transport	3.16E-04
25	GO:0010271: regulation of chlorophyll catabolic process	3.16E-04
26	GO:0015012: heparan sulfate proteoglycan biosynthetic process	3.16E-04
27	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	3.16E-04
28	GO:0006024: glycosaminoglycan biosynthetic process	3.16E-04
29	GO:0080147: root hair cell development	4.93E-04
30	GO:0043328: protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway	5.20E-04
31	GO:0080163: regulation of protein serine/threonine phosphatase activity	5.20E-04
32	GO:0015714: phosphoenolpyruvate transport	5.20E-04
33	GO:0080168: abscisic acid transport	5.20E-04
34	GO:0006048: UDP-N-acetylglucosamine biosynthetic process	5.20E-04
35	GO:0035436: triose phosphate transmembrane transport	5.20E-04
36	GO:0006065: UDP-glucuronate biosynthetic process	5.20E-04
37	GO:0015692: lead ion transport	5.20E-04
38	GO:0052546: cell wall pectin metabolic process	5.20E-04
39	GO:0010731: protein glutathionylation	7.44E-04
40	GO:0046902: regulation of mitochondrial membrane permeability	7.44E-04
41	GO:0015713: phosphoglycerate transport	9.85E-04
42	GO:0010109: regulation of photosynthesis	9.85E-04
43	GO:0045227: capsule polysaccharide biosynthetic process	9.85E-04
44	GO:0033358: UDP-L-arabinose biosynthetic process	9.85E-04
45	GO:0010193: response to ozone	1.17E-03
46	GO:0030041: actin filament polymerization	1.25E-03
47	GO:0006097: glyoxylate cycle	1.25E-03
48	GO:0034052: positive regulation of plant-type hypersensitive response	1.25E-03
49	GO:0009753: response to jasmonic acid	1.45E-03
50	GO:0009759: indole glucosinolate biosynthetic process	1.53E-03
51	GO:0048317: seed morphogenesis	1.53E-03
52	GO:0010150: leaf senescence	1.81E-03
53	GO:0045926: negative regulation of growth	1.83E-03
54	GO:0071470: cellular response to osmotic stress	1.83E-03
55	GO:1900057: positive regulation of leaf senescence	2.15E-03
56	GO:0000122: negative regulation of transcription from RNA polymerase II promoter	2.15E-03
57	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	2.15E-03
58	GO:1900056: negative regulation of leaf senescence	2.15E-03
59	GO:0042742: defense response to bacterium	2.30E-03
60	GO:0006979: response to oxidative stress	2.33E-03
61	GO:0043068: positive regulation of programmed cell death	2.49E-03
62	GO:0045010: actin nucleation	2.49E-03
63	GO:0031540: regulation of anthocyanin biosynthetic process	2.49E-03
64	GO:0006102: isocitrate metabolic process	2.49E-03
65	GO:0010928: regulation of auxin mediated signaling pathway	2.49E-03
66	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	2.49E-03
67	GO:0010120: camalexin biosynthetic process	2.85E-03
68	GO:0010204: defense response signaling pathway, resistance gene-independent	2.85E-03
69	GO:0019432: triglyceride biosynthetic process	3.22E-03
70	GO:0051707: response to other organism	3.54E-03
71	GO:0010380: regulation of chlorophyll biosynthetic process	3.60E-03
72	GO:0009723: response to ethylene	3.77E-03
73	GO:0009870: defense response signaling pathway, resistance gene-dependent	4.00E-03
74	GO:0006032: chitin catabolic process	4.00E-03
75	GO:0031347: regulation of defense response	4.27E-03
76	GO:0019684: photosynthesis, light reaction	4.42E-03
77	GO:0009089: lysine biosynthetic process via diaminopimelate	4.42E-03
78	GO:0009684: indoleacetic acid biosynthetic process	4.42E-03
79	GO:0006810: transport	4.51E-03
80	GO:0006486: protein glycosylation	4.75E-03
81	GO:0005975: carbohydrate metabolic process	4.78E-03
82	GO:0015979: photosynthesis	4.87E-03
83	GO:2000028: regulation of photoperiodism, flowering	5.30E-03
84	GO:0018107: peptidyl-threonine phosphorylation	5.30E-03
85	GO:0002237: response to molecule of bacterial origin	5.76E-03
86	GO:0009626: plant-type hypersensitive response	5.98E-03
87	GO:0046688: response to copper ion	6.23E-03
88	GO:0009225: nucleotide-sugar metabolic process	6.23E-03
89	GO:0000162: tryptophan biosynthetic process	6.71E-03
90	GO:0018105: peptidyl-serine phosphorylation	6.96E-03
91	GO:0006825: copper ion transport	7.73E-03
92	GO:0016998: cell wall macromolecule catabolic process	8.26E-03
93	GO:0009269: response to desiccation	8.26E-03
94	GO:0009411: response to UV	9.35E-03
95	GO:0009625: response to insect	9.35E-03
96	GO:0006012: galactose metabolic process	9.35E-03
97	GO:0006357: regulation of transcription from RNA polymerase II promoter	9.65E-03
98	GO:0000271: polysaccharide biosynthetic process	1.11E-02
99	GO:0006885: regulation of pH	1.17E-02
100	GO:0009960: endosperm development	1.17E-02
101	GO:0045489: pectin biosynthetic process	1.17E-02
102	GO:0009749: response to glucose	1.29E-02
103	GO:0009739: response to gibberellin	1.31E-02
104	GO:0007166: cell surface receptor signaling pathway	1.34E-02
105	GO:0002229: defense response to oomycetes	1.36E-02
106	GO:0071554: cell wall organization or biogenesis	1.36E-02
107	GO:0007264: small GTPase mediated signal transduction	1.42E-02
108	GO:0050832: defense response to fungus	1.53E-02
109	GO:0006952: defense response	1.62E-02
110	GO:0010029: regulation of seed germination	1.83E-02
111	GO:0055085: transmembrane transport	1.89E-02
112	GO:0006906: vesicle fusion	1.90E-02
113	GO:0009627: systemic acquired resistance	1.90E-02
114	GO:0006950: response to stress	1.98E-02
115	GO:0009832: plant-type cell wall biogenesis	2.20E-02
116	GO:0080167: response to karrikin	2.25E-02
117	GO:0006499: N-terminal protein myristoylation	2.28E-02
118	GO:0009407: toxin catabolic process	2.28E-02
119	GO:0009631: cold acclimation	2.36E-02
120	GO:0048527: lateral root development	2.36E-02
121	GO:0010119: regulation of stomatal movement	2.36E-02
122	GO:0016051: carbohydrate biosynthetic process	2.51E-02
123	GO:0009853: photorespiration	2.51E-02
124	GO:0006099: tricarboxylic acid cycle	2.60E-02
125	GO:0006839: mitochondrial transport	2.76E-02
126	GO:0009737: response to abscisic acid	2.81E-02
127	GO:0006887: exocytosis	2.84E-02
128	GO:0006897: endocytosis	2.84E-02
129	GO:0009744: response to sucrose	3.01E-02
130	GO:0009636: response to toxic substance	3.27E-02
131	GO:0006855: drug transmembrane transport	3.36E-02
132	GO:0071555: cell wall organization	3.39E-02
133	GO:0006812: cation transport	3.54E-02
134	GO:0042538: hyperosmotic salinity response	3.54E-02
135	GO:0006813: potassium ion transport	3.72E-02
136	GO:0030154: cell differentiation	3.77E-02
137	GO:0010224: response to UV-B	3.82E-02
138	GO:0009733: response to auxin	3.91E-02
139	GO:0015031: protein transport	4.56E-02
140	GO:0009734: auxin-activated signaling pathway	4.66E-02
141	GO:0009624: response to nematode	4.78E-02

Rank	GO Term	Adjusted P value
1	GO:0005212: structural constituent of eye lens	0.00E+00
2	GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor	0.00E+00
3	GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity	0.00E+00
4	GO:0004610: phosphoacetylglucosamine mutase activity	0.00E+00
5	GO:0010285: L,L-diaminopimelate aminotransferase activity	1.37E-04
6	GO:0048531: beta-1,3-galactosyltransferase activity	3.16E-04
7	GO:0003994: aconitate hydratase activity	3.16E-04
8	GO:0015152: glucose-6-phosphate transmembrane transporter activity	3.16E-04
9	GO:0001046: core promoter sequence-specific DNA binding	4.93E-04
10	GO:0032403: protein complex binding	5.20E-04
11	GO:0071917: triose-phosphate transmembrane transporter activity	5.20E-04
12	GO:0003979: UDP-glucose 6-dehydrogenase activity	5.20E-04
13	GO:0004324: ferredoxin-NADP+ reductase activity	5.20E-04
14	GO:0016531: copper chaperone activity	5.20E-04
15	GO:0035529: NADH pyrophosphatase activity	7.44E-04
16	GO:0017077: oxidative phosphorylation uncoupler activity	7.44E-04
17	GO:0015120: phosphoglycerate transmembrane transporter activity	9.85E-04
18	GO:0050373: UDP-arabinose 4-epimerase activity	9.85E-04
19	GO:0004834: tryptophan synthase activity	9.85E-04
20	GO:0047631: ADP-ribose diphosphatase activity	1.25E-03
21	GO:0005471: ATP:ADP antiporter activity	1.25E-03
22	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	1.25E-03
23	GO:0000210: NAD+ diphosphatase activity	1.53E-03
24	GO:0043565: sequence-specific DNA binding	1.59E-03
25	GO:0003978: UDP-glucose 4-epimerase activity	1.83E-03
26	GO:0004144: diacylglycerol O-acyltransferase activity	1.83E-03
27	GO:0004656: procollagen-proline 4-dioxygenase activity	1.83E-03
28	GO:0008375: acetylglucosaminyltransferase activity	1.87E-03
29	GO:0004568: chitinase activity	4.00E-03
30	GO:0004864: protein phosphatase inhibitor activity	4.00E-03
31	GO:0051287: NAD binding	4.27E-03
32	GO:0008559: xenobiotic-transporting ATPase activity	4.42E-03
33	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	5.18E-03
34	GO:0005315: inorganic phosphate transmembrane transporter activity	5.30E-03
35	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	5.76E-03
36	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	5.93E-03
37	GO:0016757: transferase activity, transferring glycosyl groups	6.30E-03
38	GO:0031418: L-ascorbic acid binding	7.22E-03
39	GO:0005509: calcium ion binding	8.04E-03
40	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	8.79E-03
41	GO:0004499: N,N-dimethylaniline monooxygenase activity	9.92E-03
42	GO:0005451: monovalent cation:proton antiporter activity	1.11E-02
43	GO:0015299: solute:proton antiporter activity	1.23E-02
44	GO:0004197: cysteine-type endopeptidase activity	1.42E-02
45	GO:0015385: sodium:proton antiporter activity	1.49E-02
46	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.49E-02
47	GO:0042802: identical protein binding	1.49E-02
48	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.62E-02
49	GO:0008483: transaminase activity	1.62E-02
50	GO:0016413: O-acetyltransferase activity	1.69E-02
51	GO:0016740: transferase activity	1.80E-02
52	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.90E-02
53	GO:0030247: polysaccharide binding	1.98E-02
54	GO:0004683: calmodulin-dependent protein kinase activity	1.98E-02
55	GO:0005507: copper ion binding	2.19E-02
56	GO:0005516: calmodulin binding	2.35E-02
57	GO:0003700: transcription factor activity, sequence-specific DNA binding	2.40E-02
58	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.51E-02
59	GO:0000149: SNARE binding	2.68E-02
60	GO:0051539: 4 iron, 4 sulfur cluster binding	2.76E-02
61	GO:0050661: NADP binding	2.76E-02
62	GO:0004364: glutathione transferase activity	2.93E-02
63	GO:0005484: SNAP receptor activity	3.01E-02
64	GO:0044212: transcription regulatory region DNA binding	3.39E-02
65	GO:0003824: catalytic activity	3.81E-02
66	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	4.29E-02
67	GO:0016874: ligase activity	4.58E-02
68	GO:0003779: actin binding	4.68E-02

Rank	GO Term	Adjusted P value
1	GO:0000813: ESCRT I complex	2.54E-05
2	GO:0005794: Golgi apparatus	3.14E-04
3	GO:0016021: integral component of membrane	7.48E-04
4	GO:0000164: protein phosphatase type 1 complex	1.25E-03
5	GO:0005740: mitochondrial envelope	4.00E-03
6	GO:0005743: mitochondrial inner membrane	6.16E-03
7	GO:0005795: Golgi stack	6.23E-03
8	GO:0005758: mitochondrial intermembrane space	7.22E-03
9	GO:0005770: late endosome	1.17E-02
10	GO:0000139: Golgi membrane	1.44E-02
11	GO:0032580: Golgi cisterna membrane	1.55E-02
12	GO:0005774: vacuolar membrane	1.99E-02
13	GO:0000325: plant-type vacuole	2.36E-02
14	GO:0005802: trans-Golgi network	2.54E-02
15	GO:0031201: SNARE complex	2.84E-02
16	GO:0005681: spliceosomal complex	4.19E-02
17	GO:0016607: nuclear speck	4.29E-02