co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G25730

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0070212: protein poly-ADP-ribosylation	0.00E+00
2	GO:2001142: nicotinate transport	0.00E+00
3	GO:0002764: immune response-regulating signaling pathway	0.00E+00
4	GO:2001143: N-methylnicotinate transport	0.00E+00
5	GO:0009626: plant-type hypersensitive response	2.43E-08
6	GO:0000187: activation of MAPK activity	3.65E-06
7	GO:2000037: regulation of stomatal complex patterning	2.53E-05
8	GO:0051245: negative regulation of cellular defense response	8.61E-05
9	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	8.61E-05
10	GO:0010941: regulation of cell death	8.61E-05
11	GO:0010045: response to nickel cation	8.61E-05
12	GO:0051180: vitamin transport	8.61E-05
13	GO:0030974: thiamine pyrophosphate transport	8.61E-05
14	GO:0015784: GDP-mannose transport	8.61E-05
15	GO:0034975: protein folding in endoplasmic reticulum	8.61E-05
16	GO:0048482: plant ovule morphogenesis	8.61E-05
17	GO:0010365: positive regulation of ethylene biosynthetic process	8.61E-05
18	GO:0043069: negative regulation of programmed cell death	1.03E-04
19	GO:0010229: inflorescence development	1.63E-04
20	GO:0034605: cellular response to heat	1.86E-04
21	GO:0002237: response to molecule of bacterial origin	1.86E-04
22	GO:0015893: drug transport	2.04E-04
23	GO:0010042: response to manganese ion	2.04E-04
24	GO:0002221: pattern recognition receptor signaling pathway	2.04E-04
25	GO:0070588: calcium ion transmembrane transport	2.10E-04
26	GO:0006468: protein phosphorylation	2.63E-04
27	GO:0051091: positive regulation of sequence-specific DNA binding transcription factor activity	3.42E-04
28	GO:0010581: regulation of starch biosynthetic process	3.42E-04
29	GO:0002230: positive regulation of defense response to virus by host	3.42E-04
30	GO:0016045: detection of bacterium	3.42E-04
31	GO:0009062: fatty acid catabolic process	3.42E-04
32	GO:0010359: regulation of anion channel activity	3.42E-04
33	GO:0051176: positive regulation of sulfur metabolic process	3.42E-04
34	GO:0046621: negative regulation of organ growth	3.42E-04
35	GO:0015783: GDP-fucose transport	3.42E-04
36	GO:0009814: defense response, incompatible interaction	3.51E-04
37	GO:0010227: floral organ abscission	3.83E-04
38	GO:0010306: rhamnogalacturonan II biosynthetic process	4.92E-04
39	GO:0006612: protein targeting to membrane	4.92E-04
40	GO:0015696: ammonium transport	4.92E-04
41	GO:0046713: borate transport	4.92E-04
42	GO:0072488: ammonium transmembrane transport	6.55E-04
43	GO:0010363: regulation of plant-type hypersensitive response	6.55E-04
44	GO:2000038: regulation of stomatal complex development	6.55E-04
45	GO:0080142: regulation of salicylic acid biosynthetic process	6.55E-04
46	GO:0046345: abscisic acid catabolic process	6.55E-04
47	GO:0051607: defense response to virus	8.66E-04
48	GO:0048317: seed morphogenesis	1.01E-03
49	GO:0008219: cell death	1.18E-03
50	GO:1900056: negative regulation of leaf senescence	1.41E-03
51	GO:0070370: cellular heat acclimation	1.41E-03
52	GO:0010038: response to metal ion	1.41E-03
53	GO:0032875: regulation of DNA endoreduplication	1.63E-03
54	GO:0006887: exocytosis	1.75E-03
55	GO:0080167: response to karrikin	1.84E-03
56	GO:0071482: cellular response to light stimulus	1.86E-03
57	GO:0048193: Golgi vesicle transport	1.86E-03
58	GO:0010204: defense response signaling pathway, resistance gene-independent	1.86E-03
59	GO:0010200: response to chitin	1.92E-03
60	GO:0000165: MAPK cascade	2.28E-03
61	GO:0009809: lignin biosynthetic process	2.54E-03
62	GO:0009870: defense response signaling pathway, resistance gene-dependent	2.61E-03
63	GO:0006032: chitin catabolic process	2.61E-03
64	GO:0000272: polysaccharide catabolic process	2.87E-03
65	GO:0042742: defense response to bacterium	3.43E-03
66	GO:0009718: anthocyanin-containing compound biosynthetic process	3.43E-03
67	GO:0042343: indole glucosinolate metabolic process	4.03E-03
68	GO:0010053: root epidermal cell differentiation	4.03E-03
69	GO:0009863: salicylic acid mediated signaling pathway	4.65E-03
70	GO:0048278: vesicle docking	5.32E-03
71	GO:0031408: oxylipin biosynthetic process	5.32E-03
72	GO:0016998: cell wall macromolecule catabolic process	5.32E-03
73	GO:0098542: defense response to other organism	5.32E-03
74	GO:0016226: iron-sulfur cluster assembly	5.66E-03
75	GO:0071456: cellular response to hypoxia	5.66E-03
76	GO:0001944: vasculature development	6.01E-03
77	GO:0070417: cellular response to cold	6.73E-03
78	GO:0007166: cell surface receptor signaling pathway	7.07E-03
79	GO:0000271: polysaccharide biosynthetic process	7.10E-03
80	GO:0045489: pectin biosynthetic process	7.48E-03
81	GO:0071472: cellular response to salt stress	7.48E-03
82	GO:0061025: membrane fusion	7.87E-03
83	GO:0002229: defense response to oomycetes	8.66E-03
84	GO:0010193: response to ozone	8.66E-03
85	GO:0006891: intra-Golgi vesicle-mediated transport	8.66E-03
86	GO:0006635: fatty acid beta-oxidation	8.66E-03
87	GO:0016032: viral process	9.07E-03
88	GO:0006464: cellular protein modification process	9.91E-03
89	GO:0006904: vesicle docking involved in exocytosis	1.03E-02
90	GO:0006970: response to osmotic stress	1.03E-02
91	GO:0009615: response to virus	1.12E-02
92	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.17E-02
93	GO:0009816: defense response to bacterium, incompatible interaction	1.17E-02
94	GO:0006906: vesicle fusion	1.21E-02
95	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.23E-02
96	GO:0044550: secondary metabolite biosynthetic process	1.29E-02
97	GO:0016049: cell growth	1.31E-02
98	GO:0006886: intracellular protein transport	1.47E-02
99	GO:0010043: response to zinc ion	1.50E-02
100	GO:0007568: aging	1.50E-02
101	GO:0009867: jasmonic acid mediated signaling pathway	1.60E-02
102	GO:0016051: carbohydrate biosynthetic process	1.60E-02
103	GO:0006839: mitochondrial transport	1.76E-02
104	GO:0050832: defense response to fungus	1.78E-02
105	GO:0008643: carbohydrate transport	2.02E-02
106	GO:0031347: regulation of defense response	2.19E-02
107	GO:0009409: response to cold	2.23E-02
108	GO:0042538: hyperosmotic salinity response	2.25E-02
109	GO:0009624: response to nematode	3.04E-02
110	GO:0009742: brassinosteroid mediated signaling pathway	3.17E-02
111	GO:0016036: cellular response to phosphate starvation	4.27E-02
112	GO:0006952: defense response	4.44E-02
113	GO:0007623: circadian rhythm	4.49E-02
114	GO:0016310: phosphorylation	4.66E-02

Rank	GO Term	Adjusted P value
1	GO:0005458: GDP-mannose transmembrane transporter activity	0.00E+00
2	GO:0090417: N-methylnicotinate transporter activity	0.00E+00
3	GO:0090416: nicotinate transporter activity	0.00E+00
4	GO:0016301: kinase activity	1.37E-05
5	GO:0004708: MAP kinase kinase activity	4.50E-05
6	GO:0090422: thiamine pyrophosphate transporter activity	8.61E-05
7	GO:0015085: calcium ion transmembrane transporter activity	8.61E-05
8	GO:0080042: ADP-glucose pyrophosphohydrolase activity	8.61E-05
9	GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity	8.61E-05
10	GO:0008809: carnitine racemase activity	8.61E-05
11	GO:0005388: calcium-transporting ATPase activity	1.63E-04
12	GO:0017110: nucleoside-diphosphatase activity	2.04E-04
13	GO:0080041: ADP-ribose pyrophosphohydrolase activity	2.04E-04
14	GO:0033897: ribonuclease T2 activity	3.42E-04
15	GO:0005457: GDP-fucose transmembrane transporter activity	3.42E-04
16	GO:0004165: dodecenoyl-CoA delta-isomerase activity	4.92E-04
17	GO:0019199: transmembrane receptor protein kinase activity	6.55E-04
18	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	8.18E-04
19	GO:0047631: ADP-ribose diphosphatase activity	8.29E-04
20	GO:0010294: abscisic acid glucosyltransferase activity	8.29E-04
21	GO:0000210: NAD+ diphosphatase activity	1.01E-03
22	GO:0035252: UDP-xylosyltransferase activity	1.01E-03
23	GO:0008519: ammonium transmembrane transporter activity	1.01E-03
24	GO:0004674: protein serine/threonine kinase activity	1.07E-03
25	GO:0016621: cinnamoyl-CoA reductase activity	1.41E-03
26	GO:0004620: phospholipase activity	1.41E-03
27	GO:0005338: nucleotide-sugar transmembrane transporter activity	1.41E-03
28	GO:0052747: sinapyl alcohol dehydrogenase activity	1.63E-03
29	GO:0004714: transmembrane receptor protein tyrosine kinase activity	1.63E-03
30	GO:0005524: ATP binding	2.45E-03
31	GO:0004713: protein tyrosine kinase activity	2.61E-03
32	GO:0004568: chitinase activity	2.61E-03
33	GO:0008047: enzyme activator activity	2.61E-03
34	GO:0008234: cysteine-type peptidase activity	2.80E-03
35	GO:0047372: acylglycerol lipase activity	2.87E-03
36	GO:0045551: cinnamyl-alcohol dehydrogenase activity	3.15E-03
37	GO:0004521: endoribonuclease activity	3.15E-03
38	GO:0015035: protein disulfide oxidoreductase activity	3.70E-03
39	GO:0008061: chitin binding	4.03E-03
40	GO:0043130: ubiquitin binding	4.65E-03
41	GO:0004540: ribonuclease activity	5.32E-03
42	GO:0033612: receptor serine/threonine kinase binding	5.32E-03
43	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	5.66E-03
44	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	5.76E-03
45	GO:0022891: substrate-specific transmembrane transporter activity	6.01E-03
46	GO:0003756: protein disulfide isomerase activity	6.36E-03
47	GO:0003713: transcription coactivator activity	7.48E-03
48	GO:0050662: coenzyme binding	7.87E-03
49	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	9.48E-03
50	GO:0019825: oxygen binding	9.74E-03
51	GO:0043531: ADP binding	1.05E-02
52	GO:0005509: calcium ion binding	1.38E-02
53	GO:0005506: iron ion binding	1.49E-02
54	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	1.54E-02
55	GO:0000149: SNARE binding	1.70E-02
56	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.70E-02
57	GO:0005484: SNAP receptor activity	1.92E-02
58	GO:0051287: NAD binding	2.19E-02
59	GO:0016298: lipase activity	2.43E-02
60	GO:0004672: protein kinase activity	2.47E-02
61	GO:0045735: nutrient reservoir activity	2.67E-02
62	GO:0020037: heme binding	2.71E-02
63	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	2.73E-02
64	GO:0005515: protein binding	2.75E-02
65	GO:0080044: quercetin 7-O-glucosyltransferase activity	2.85E-02
66	GO:0080043: quercetin 3-O-glucosyltransferase activity	2.85E-02
67	GO:0022857: transmembrane transporter activity	2.92E-02
68	GO:0008270: zinc ion binding	3.50E-02
69	GO:0016758: transferase activity, transferring hexosyl groups	3.50E-02
70	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	3.64E-02
71	GO:0015144: carbohydrate transmembrane transporter activity	4.06E-02
72	GO:0008565: protein transporter activity	4.06E-02
73	GO:0005351: sugar:proton symporter activity	4.42E-02
74	GO:0005516: calmodulin binding	4.67E-02
75	GO:0008194: UDP-glycosyltransferase activity	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0012505: endomembrane system	3.97E-04
2	GO:0005886: plasma membrane	1.36E-03
3	GO:0005795: Golgi stack	4.03E-03
4	GO:0043234: protein complex	4.34E-03
5	GO:0016021: integral component of membrane	4.42E-03
6	GO:0000145: exocyst	9.07E-03
7	GO:0031201: SNARE complex	1.81E-02
8	GO:0090406: pollen tube	1.92E-02
9	GO:0043231: intracellular membrane-bounded organelle	1.94E-02
10	GO:0000139: Golgi membrane	2.23E-02
11	GO:0005887: integral component of plasma membrane	2.39E-02
12	GO:0010008: endosome membrane	2.73E-02