Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G23890

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1901528: hydrogen peroxide mediated signaling pathway involved in stomatal movement0.00E+00
2GO:0009971: anastral spindle assembly involved in male meiosis0.00E+00
3GO:0010583: response to cyclopentenone5.72E-08
4GO:0051301: cell division1.64E-06
5GO:0006426: glycyl-tRNA aminoacylation1.33E-04
6GO:0048016: inositol phosphate-mediated signaling1.33E-04
7GO:0006438: valyl-tRNA aminoacylation1.33E-04
8GO:1901529: positive regulation of anion channel activity3.07E-04
9GO:0031145: anaphase-promoting complex-dependent catabolic process5.06E-04
10GO:0001578: microtubule bundle formation5.06E-04
11GO:0030865: cortical cytoskeleton organization5.06E-04
12GO:1901527: abscisic acid-activated signaling pathway involved in stomatal movement5.06E-04
13GO:0010226: response to lithium ion5.06E-04
14GO:0009558: embryo sac cellularization7.24E-04
15GO:0010321: regulation of vegetative phase change7.24E-04
16GO:0051513: regulation of monopolar cell growth7.24E-04
17GO:0030071: regulation of mitotic metaphase/anaphase transition7.24E-04
18GO:0007276: gamete generation7.24E-04
19GO:0042127: regulation of cell proliferation7.38E-04
20GO:0051726: regulation of cell cycle9.34E-04
21GO:0042991: transcription factor import into nucleus9.59E-04
22GO:0009652: thigmotropism9.59E-04
23GO:0051322: anaphase9.59E-04
24GO:0007018: microtubule-based movement9.89E-04
25GO:0016042: lipid catabolic process1.17E-03
26GO:0048497: maintenance of floral organ identity1.21E-03
27GO:0007094: mitotic spindle assembly checkpoint1.21E-03
28GO:0032957: inositol trisphosphate metabolic process1.21E-03
29GO:0046855: inositol phosphate dephosphorylation1.49E-03
30GO:0000910: cytokinesis1.52E-03
31GO:0010067: procambium histogenesis1.78E-03
32GO:0010444: guard mother cell differentiation2.09E-03
33GO:0045995: regulation of embryonic development2.09E-03
34GO:1900056: negative regulation of leaf senescence2.09E-03
35GO:0000082: G1/S transition of mitotic cell cycle2.09E-03
36GO:0010492: maintenance of shoot apical meristem identity2.42E-03
37GO:0046620: regulation of organ growth2.42E-03
38GO:0010332: response to gamma radiation3.13E-03
39GO:0007346: regulation of mitotic cell cycle3.50E-03
40GO:0006949: syncytium formation3.89E-03
41GO:0006782: protoporphyrinogen IX biosynthetic process3.89E-03
42GO:0048229: gametophyte development4.30E-03
43GO:0046856: phosphatidylinositol dephosphorylation4.30E-03
44GO:0009736: cytokinin-activated signaling pathway4.56E-03
45GO:0012501: programmed cell death4.72E-03
46GO:0010588: cotyledon vascular tissue pattern formation5.15E-03
47GO:0007034: vacuolar transport5.60E-03
48GO:0009887: animal organ morphogenesis5.60E-03
49GO:0006636: unsaturated fatty acid biosynthetic process6.53E-03
50GO:0006833: water transport6.53E-03
51GO:0048364: root development6.76E-03
52GO:0080147: root hair cell development7.01E-03
53GO:0019953: sexual reproduction7.51E-03
54GO:0006418: tRNA aminoacylation for protein translation7.51E-03
55GO:0007017: microtubule-based process7.51E-03
56GO:0048278: vesicle docking8.02E-03
57GO:0009686: gibberellin biosynthetic process9.08E-03
58GO:0010091: trichome branching9.63E-03
59GO:0009734: auxin-activated signaling pathway9.91E-03
60GO:0034220: ion transmembrane transport1.08E-02
61GO:0010051: xylem and phloem pattern formation1.08E-02
62GO:0000226: microtubule cytoskeleton organization1.08E-02
63GO:0009741: response to brassinosteroid1.13E-02
64GO:0010305: leaf vascular tissue pattern formation1.13E-02
65GO:0061025: membrane fusion1.19E-02
66GO:0048825: cotyledon development1.25E-02
67GO:0006470: protein dephosphorylation1.28E-02
68GO:0071554: cell wall organization or biogenesis1.32E-02
69GO:0030163: protein catabolic process1.44E-02
70GO:0009828: plant-type cell wall loosening1.51E-02
71GO:0019760: glucosinolate metabolic process1.51E-02
72GO:0006906: vesicle fusion1.85E-02
73GO:0048573: photoperiodism, flowering1.92E-02
74GO:0015995: chlorophyll biosynthetic process1.92E-02
75GO:0007049: cell cycle1.95E-02
76GO:0000160: phosphorelay signal transduction system2.14E-02
77GO:0010311: lateral root formation2.14E-02
78GO:0030001: metal ion transport2.68E-02
79GO:0006887: exocytosis2.76E-02
80GO:0008283: cell proliferation2.92E-02
81GO:0009926: auxin polar transport2.92E-02
82GO:0009744: response to sucrose2.92E-02
83GO:0051707: response to other organism2.92E-02
84GO:0000209: protein polyubiquitination3.01E-02
85GO:0009664: plant-type cell wall organization3.44E-02
86GO:0042538: hyperosmotic salinity response3.44E-02
87GO:0030154: cell differentiation3.58E-02
88GO:0009733: response to auxin3.72E-02
89GO:0006417: regulation of translation3.89E-02
90GO:0048367: shoot system development4.17E-02
91GO:0048316: seed development4.17E-02
92GO:0009740: gibberellic acid mediated signaling pathway4.45E-02
RankGO TermAdjusted P value
1GO:0009899: ent-kaurene synthase activity0.00E+00
2GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity5.67E-05
3GO:0003777: microtubule motor activity5.99E-05
4GO:0052689: carboxylic ester hydrolase activity1.21E-04
5GO:0004832: valine-tRNA ligase activity1.33E-04
6GO:0004820: glycine-tRNA ligase activity1.33E-04
7GO:0008569: ATP-dependent microtubule motor activity, minus-end-directed1.33E-04
8GO:0046030: inositol trisphosphate phosphatase activity1.33E-04
9GO:0008017: microtubule binding2.65E-04
10GO:0004109: coproporphyrinogen oxidase activity3.07E-04
11GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity1.49E-03
12GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water2.77E-03
13GO:0016788: hydrolase activity, acting on ester bonds3.05E-03
14GO:0005089: Rho guanyl-nucleotide exchange factor activity4.30E-03
15GO:0016298: lipase activity4.72E-03
16GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity4.72E-03
17GO:0042973: glucan endo-1,3-beta-D-glucosidase activity5.60E-03
18GO:0004190: aspartic-type endopeptidase activity6.06E-03
19GO:0003779: actin binding6.29E-03
20GO:0019706: protein-cysteine S-palmitoyltransferase activity8.02E-03
21GO:0004707: MAP kinase activity8.02E-03
22GO:0030570: pectate lyase activity9.08E-03
23GO:0004812: aminoacyl-tRNA ligase activity1.02E-02
24GO:0001085: RNA polymerase II transcription factor binding1.13E-02
25GO:0016853: isomerase activity1.19E-02
26GO:0005515: protein binding1.38E-02
27GO:0000156: phosphorelay response regulator activity1.44E-02
28GO:0051015: actin filament binding1.44E-02
29GO:0016791: phosphatase activity1.51E-02
30GO:0016413: O-acetyltransferase activity1.64E-02
31GO:0015250: water channel activity1.71E-02
32GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding2.29E-02
33GO:0000149: SNARE binding2.60E-02
34GO:0004722: protein serine/threonine phosphatase activity2.84E-02
35GO:0005484: SNAP receptor activity2.92E-02
36GO:0009055: electron carrier activity3.42E-02
37GO:0031625: ubiquitin protein ligase binding3.89E-02
RankGO TermAdjusted P value
1GO:0005872: minus-end kinesin complex0.00E+00
2GO:0009524: phragmoplast1.18E-05
3GO:0005828: kinetochore microtubule1.47E-05
4GO:0000777: condensed chromosome kinetochore5.10E-05
5GO:0005874: microtubule9.09E-05
6GO:0005819: spindle3.07E-04
7GO:0030286: dynein complex9.59E-04
8GO:0000776: kinetochore1.21E-03
9GO:0000793: condensed chromosome1.49E-03
10GO:0000815: ESCRT III complex1.78E-03
11GO:0010369: chromocenter1.78E-03
12GO:0000794: condensed nuclear chromosome2.09E-03
13GO:0046658: anchored component of plasma membrane2.44E-03
14GO:0000922: spindle pole3.13E-03
15GO:0005876: spindle microtubule3.50E-03
16GO:0005884: actin filament4.30E-03
17GO:0009574: preprophase band5.15E-03
18GO:0030659: cytoplasmic vesicle membrane5.60E-03
19GO:0031225: anchored component of membrane5.75E-03
20GO:0005871: kinesin complex1.02E-02
21GO:0009504: cell plate1.25E-02
22GO:0005667: transcription factor complex1.85E-02
23GO:0005737: cytoplasm2.20E-02
24GO:0005618: cell wall2.33E-02
25GO:0031201: SNARE complex2.76E-02
26GO:0005856: cytoskeleton3.18E-02
27GO:0005576: extracellular region3.55E-02
28GO:0005635: nuclear envelope3.80E-02
29GO:0012505: endomembrane system4.55E-02
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Gene type



Gene DE type