GO Enrichment Analysis of Co-expressed Genes with
AT3G23480
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016118: carotenoid catabolic process | 0.00E+00 |
| 2 | GO:0046471: phosphatidylglycerol metabolic process | 0.00E+00 |
| 3 | GO:1905157: positive regulation of photosynthesis | 0.00E+00 |
| 4 | GO:0009773: photosynthetic electron transport in photosystem I | 1.45E-07 |
| 5 | GO:0005982: starch metabolic process | 6.38E-06 |
| 6 | GO:0015994: chlorophyll metabolic process | 2.51E-05 |
| 7 | GO:0019252: starch biosynthetic process | 1.33E-04 |
| 8 | GO:0034337: RNA folding | 1.82E-04 |
| 9 | GO:0006047: UDP-N-acetylglucosamine metabolic process | 1.82E-04 |
| 10 | GO:0009090: homoserine biosynthetic process | 1.82E-04 |
| 11 | GO:0046467: membrane lipid biosynthetic process | 1.82E-04 |
| 12 | GO:0019276: UDP-N-acetylgalactosamine metabolic process | 1.82E-04 |
| 13 | GO:0010028: xanthophyll cycle | 1.82E-04 |
| 14 | GO:0016121: carotene catabolic process | 4.10E-04 |
| 15 | GO:0080029: cellular response to boron-containing substance levels | 4.10E-04 |
| 16 | GO:0006898: receptor-mediated endocytosis | 4.10E-04 |
| 17 | GO:0016124: xanthophyll catabolic process | 4.10E-04 |
| 18 | GO:0016122: xanthophyll metabolic process | 4.10E-04 |
| 19 | GO:0032259: methylation | 4.51E-04 |
| 20 | GO:0034599: cellular response to oxidative stress | 5.07E-04 |
| 21 | GO:0006048: UDP-N-acetylglucosamine biosynthetic process | 6.69E-04 |
| 22 | GO:0006696: ergosterol biosynthetic process | 6.69E-04 |
| 23 | GO:0019748: secondary metabolic process | 9.43E-04 |
| 24 | GO:0045338: farnesyl diphosphate metabolic process | 9.55E-04 |
| 25 | GO:0006020: inositol metabolic process | 9.55E-04 |
| 26 | GO:0009152: purine ribonucleotide biosynthetic process | 9.55E-04 |
| 27 | GO:0046653: tetrahydrofolate metabolic process | 9.55E-04 |
| 28 | GO:0046713: borate transport | 9.55E-04 |
| 29 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 9.55E-04 |
| 30 | GO:0009067: aspartate family amino acid biosynthetic process | 9.55E-04 |
| 31 | GO:1902358: sulfate transmembrane transport | 9.55E-04 |
| 32 | GO:0009306: protein secretion | 1.11E-03 |
| 33 | GO:0009765: photosynthesis, light harvesting | 1.27E-03 |
| 34 | GO:0006021: inositol biosynthetic process | 1.27E-03 |
| 35 | GO:0071483: cellular response to blue light | 1.27E-03 |
| 36 | GO:0010021: amylopectin biosynthetic process | 1.27E-03 |
| 37 | GO:0015979: photosynthesis | 1.60E-03 |
| 38 | GO:0006656: phosphatidylcholine biosynthetic process | 1.61E-03 |
| 39 | GO:0009904: chloroplast accumulation movement | 1.61E-03 |
| 40 | GO:1901657: glycosyl compound metabolic process | 1.94E-03 |
| 41 | GO:0046855: inositol phosphate dephosphorylation | 1.98E-03 |
| 42 | GO:1902456: regulation of stomatal opening | 1.98E-03 |
| 43 | GO:0009643: photosynthetic acclimation | 1.98E-03 |
| 44 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 1.98E-03 |
| 45 | GO:0071333: cellular response to glucose stimulus | 2.38E-03 |
| 46 | GO:1901259: chloroplast rRNA processing | 2.38E-03 |
| 47 | GO:0009903: chloroplast avoidance movement | 2.38E-03 |
| 48 | GO:0009088: threonine biosynthetic process | 2.38E-03 |
| 49 | GO:1900056: negative regulation of leaf senescence | 2.80E-03 |
| 50 | GO:0010196: nonphotochemical quenching | 2.80E-03 |
| 51 | GO:0008272: sulfate transport | 2.80E-03 |
| 52 | GO:0009769: photosynthesis, light harvesting in photosystem II | 2.80E-03 |
| 53 | GO:0009645: response to low light intensity stimulus | 2.80E-03 |
| 54 | GO:0015995: chlorophyll biosynthetic process | 2.89E-03 |
| 55 | GO:0055114: oxidation-reduction process | 3.23E-03 |
| 56 | GO:0005978: glycogen biosynthetic process | 3.24E-03 |
| 57 | GO:0009642: response to light intensity | 3.24E-03 |
| 58 | GO:0070413: trehalose metabolism in response to stress | 3.24E-03 |
| 59 | GO:0015996: chlorophyll catabolic process | 3.71E-03 |
| 60 | GO:0009657: plastid organization | 3.71E-03 |
| 61 | GO:0006098: pentose-phosphate shunt | 4.20E-03 |
| 62 | GO:0009821: alkaloid biosynthetic process | 4.20E-03 |
| 63 | GO:0009086: methionine biosynthetic process | 4.71E-03 |
| 64 | GO:0010380: regulation of chlorophyll biosynthetic process | 4.71E-03 |
| 65 | GO:0042761: very long-chain fatty acid biosynthetic process | 4.71E-03 |
| 66 | GO:0010114: response to red light | 5.21E-03 |
| 67 | GO:0006535: cysteine biosynthetic process from serine | 5.24E-03 |
| 68 | GO:0009641: shade avoidance | 5.24E-03 |
| 69 | GO:0009089: lysine biosynthetic process via diaminopimelate | 5.79E-03 |
| 70 | GO:0072593: reactive oxygen species metabolic process | 5.79E-03 |
| 71 | GO:0043085: positive regulation of catalytic activity | 5.79E-03 |
| 72 | GO:0006790: sulfur compound metabolic process | 6.35E-03 |
| 73 | GO:0006094: gluconeogenesis | 6.94E-03 |
| 74 | GO:0030048: actin filament-based movement | 6.94E-03 |
| 75 | GO:0018107: peptidyl-threonine phosphorylation | 6.94E-03 |
| 76 | GO:0006813: potassium ion transport | 7.02E-03 |
| 77 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 7.07E-03 |
| 78 | GO:0007015: actin filament organization | 7.55E-03 |
| 79 | GO:0010223: secondary shoot formation | 7.55E-03 |
| 80 | GO:0046854: phosphatidylinositol phosphorylation | 8.18E-03 |
| 81 | GO:0019762: glucosinolate catabolic process | 8.82E-03 |
| 82 | GO:0006636: unsaturated fatty acid biosynthetic process | 8.82E-03 |
| 83 | GO:0006810: transport | 8.97E-03 |
| 84 | GO:0019344: cysteine biosynthetic process | 9.48E-03 |
| 85 | GO:0005992: trehalose biosynthetic process | 9.48E-03 |
| 86 | GO:0005975: carbohydrate metabolic process | 9.50E-03 |
| 87 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.02E-02 |
| 88 | GO:0009269: response to desiccation | 1.09E-02 |
| 89 | GO:0051260: protein homooligomerization | 1.09E-02 |
| 90 | GO:0016226: iron-sulfur cluster assembly | 1.16E-02 |
| 91 | GO:0030433: ubiquitin-dependent ERAD pathway | 1.16E-02 |
| 92 | GO:0071215: cellular response to abscisic acid stimulus | 1.23E-02 |
| 93 | GO:0009058: biosynthetic process | 1.32E-02 |
| 94 | GO:0009741: response to brassinosteroid | 1.54E-02 |
| 95 | GO:0006520: cellular amino acid metabolic process | 1.54E-02 |
| 96 | GO:0006662: glycerol ether metabolic process | 1.54E-02 |
| 97 | GO:0032502: developmental process | 1.87E-02 |
| 98 | GO:0009630: gravitropism | 1.87E-02 |
| 99 | GO:0016126: sterol biosynthetic process | 2.32E-02 |
| 100 | GO:0001666: response to hypoxia | 2.32E-02 |
| 101 | GO:0010027: thylakoid membrane organization | 2.32E-02 |
| 102 | GO:0006906: vesicle fusion | 2.51E-02 |
| 103 | GO:0018298: protein-chromophore linkage | 2.81E-02 |
| 104 | GO:0009813: flavonoid biosynthetic process | 2.91E-02 |
| 105 | GO:0010218: response to far red light | 3.01E-02 |
| 106 | GO:0009910: negative regulation of flower development | 3.11E-02 |
| 107 | GO:0009853: photorespiration | 3.32E-02 |
| 108 | GO:0009637: response to blue light | 3.32E-02 |
| 109 | GO:0006631: fatty acid metabolic process | 3.76E-02 |
| 110 | GO:0006887: exocytosis | 3.76E-02 |
| 111 | GO:0045454: cell redox homeostasis | 3.98E-02 |
| 112 | GO:0000209: protein polyubiquitination | 4.09E-02 |
| 113 | GO:0009644: response to high light intensity | 4.21E-02 |
| 114 | GO:0009408: response to heat | 4.89E-02 |
| 115 | GO:0006364: rRNA processing | 4.92E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0035798: 2-alkenal reductase (NADP+) activity | 0.00E+00 |
| 2 | GO:0080083: beta-gentiobiose beta-glucosidase activity | 0.00E+00 |
| 3 | GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity | 0.00E+00 |
| 4 | GO:0030794: (S)-coclaurine-N-methyltransferase activity | 0.00E+00 |
| 5 | GO:0046422: violaxanthin de-epoxidase activity | 0.00E+00 |
| 6 | GO:0004567: beta-mannosidase activity | 0.00E+00 |
| 7 | GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors | 0.00E+00 |
| 8 | GO:0033840: NDP-glucose-starch glucosyltransferase activity | 0.00E+00 |
| 9 | GO:0052667: phosphomethylethanolamine N-methyltransferase activity | 0.00E+00 |
| 10 | GO:0036361: racemase activity, acting on amino acids and derivatives | 0.00E+00 |
| 11 | GO:0080082: esculin beta-glucosidase activity | 0.00E+00 |
| 12 | GO:0008807: carboxyvinyl-carboxyphosphonate phosphorylmutase activity | 0.00E+00 |
| 13 | GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives | 0.00E+00 |
| 14 | GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity | 0.00E+00 |
| 15 | GO:0047668: amygdalin beta-glucosidase activity | 0.00E+00 |
| 16 | GO:0004373: glycogen (starch) synthase activity | 5.87E-06 |
| 17 | GO:0009011: starch synthase activity | 2.51E-05 |
| 18 | GO:0035671: enone reductase activity | 1.82E-04 |
| 19 | GO:0052630: UDP-N-acetylgalactosamine diphosphorylase activity | 1.82E-04 |
| 20 | GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity | 1.82E-04 |
| 21 | GO:0080079: cellobiose glucosidase activity | 1.82E-04 |
| 22 | GO:0003977: UDP-N-acetylglucosamine diphosphorylase activity | 1.82E-04 |
| 23 | GO:0034256: chlorophyll(ide) b reductase activity | 1.82E-04 |
| 24 | GO:0015168: glycerol transmembrane transporter activity | 1.82E-04 |
| 25 | GO:0045486: naringenin 3-dioxygenase activity | 1.82E-04 |
| 26 | GO:0052832: inositol monophosphate 3-phosphatase activity | 4.10E-04 |
| 27 | GO:0033201: alpha-1,4-glucan synthase activity | 4.10E-04 |
| 28 | GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity | 4.10E-04 |
| 29 | GO:0008934: inositol monophosphate 1-phosphatase activity | 4.10E-04 |
| 30 | GO:0052833: inositol monophosphate 4-phosphatase activity | 4.10E-04 |
| 31 | GO:0004412: homoserine dehydrogenase activity | 4.10E-04 |
| 32 | GO:0018708: thiol S-methyltransferase activity | 4.10E-04 |
| 33 | GO:0003844: 1,4-alpha-glucan branching enzyme activity | 4.10E-04 |
| 34 | GO:0019172: glyoxalase III activity | 4.10E-04 |
| 35 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 4.10E-04 |
| 36 | GO:0000234: phosphoethanolamine N-methyltransferase activity | 4.10E-04 |
| 37 | GO:0050017: L-3-cyanoalanine synthase activity | 4.10E-04 |
| 38 | GO:0047746: chlorophyllase activity | 4.10E-04 |
| 39 | GO:0043169: cation binding | 6.69E-04 |
| 40 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 6.69E-04 |
| 41 | GO:0008864: formyltetrahydrofolate deformylase activity | 6.69E-04 |
| 42 | GO:0008168: methyltransferase activity | 8.97E-04 |
| 43 | GO:0004072: aspartate kinase activity | 9.55E-04 |
| 44 | GO:0016851: magnesium chelatase activity | 9.55E-04 |
| 45 | GO:0022890: inorganic cation transmembrane transporter activity | 9.55E-04 |
| 46 | GO:0046715: borate transmembrane transporter activity | 9.55E-04 |
| 47 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.27E-03 |
| 48 | GO:0015204: urea transmembrane transporter activity | 1.27E-03 |
| 49 | GO:0045549: 9-cis-epoxycarotenoid dioxygenase activity | 1.61E-03 |
| 50 | GO:2001070: starch binding | 1.98E-03 |
| 51 | GO:0004332: fructose-bisphosphate aldolase activity | 1.98E-03 |
| 52 | GO:0004462: lactoylglutathione lyase activity | 1.98E-03 |
| 53 | GO:0004124: cysteine synthase activity | 2.38E-03 |
| 54 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 2.38E-03 |
| 55 | GO:0102483: scopolin beta-glucosidase activity | 2.89E-03 |
| 56 | GO:0008271: secondary active sulfate transmembrane transporter activity | 3.71E-03 |
| 57 | GO:0008422: beta-glucosidase activity | 4.42E-03 |
| 58 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 4.71E-03 |
| 59 | GO:0016844: strictosidine synthase activity | 4.71E-03 |
| 60 | GO:0004185: serine-type carboxypeptidase activity | 5.21E-03 |
| 61 | GO:0008047: enzyme activator activity | 5.24E-03 |
| 62 | GO:0047372: acylglycerol lipase activity | 5.79E-03 |
| 63 | GO:0015386: potassium:proton antiporter activity | 5.79E-03 |
| 64 | GO:0015116: sulfate transmembrane transporter activity | 6.35E-03 |
| 65 | GO:0004565: beta-galactosidase activity | 6.94E-03 |
| 66 | GO:0004022: alcohol dehydrogenase (NAD) activity | 6.94E-03 |
| 67 | GO:0031072: heat shock protein binding | 6.94E-03 |
| 68 | GO:0016491: oxidoreductase activity | 7.42E-03 |
| 69 | GO:0003774: motor activity | 7.55E-03 |
| 70 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 7.55E-03 |
| 71 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 8.57E-03 |
| 72 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 8.62E-03 |
| 73 | GO:0031409: pigment binding | 8.82E-03 |
| 74 | GO:0031418: L-ascorbic acid binding | 9.48E-03 |
| 75 | GO:0051536: iron-sulfur cluster binding | 9.48E-03 |
| 76 | GO:0015079: potassium ion transmembrane transporter activity | 1.02E-02 |
| 77 | GO:0016779: nucleotidyltransferase activity | 1.16E-02 |
| 78 | GO:0030570: pectate lyase activity | 1.23E-02 |
| 79 | GO:0047134: protein-disulfide reductase activity | 1.38E-02 |
| 80 | GO:0005249: voltage-gated potassium channel activity | 1.46E-02 |
| 81 | GO:0004791: thioredoxin-disulfide reductase activity | 1.62E-02 |
| 82 | GO:0015299: solute:proton antiporter activity | 1.62E-02 |
| 83 | GO:0048038: quinone binding | 1.79E-02 |
| 84 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.96E-02 |
| 85 | GO:0016791: phosphatase activity | 2.05E-02 |
| 86 | GO:0042802: identical protein binding | 2.21E-02 |
| 87 | GO:0016597: amino acid binding | 2.23E-02 |
| 88 | GO:0015250: water channel activity | 2.32E-02 |
| 89 | GO:0016168: chlorophyll binding | 2.42E-02 |
| 90 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 2.71E-02 |
| 91 | GO:0008236: serine-type peptidase activity | 2.71E-02 |
| 92 | GO:0016788: hydrolase activity, acting on ester bonds | 2.74E-02 |
| 93 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.81E-02 |
| 94 | GO:0003746: translation elongation factor activity | 3.32E-02 |
| 95 | GO:0030246: carbohydrate binding | 3.33E-02 |
| 96 | GO:0000149: SNARE binding | 3.54E-02 |
| 97 | GO:0050661: NADP binding | 3.65E-02 |
| 98 | GO:0005484: SNAP receptor activity | 3.98E-02 |
| 99 | GO:0015293: symporter activity | 4.32E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 1.16E-15 |
| 2 | GO:0009534: chloroplast thylakoid | 7.90E-09 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 1.00E-08 |
| 4 | GO:0009570: chloroplast stroma | 1.01E-06 |
| 5 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 4.68E-06 |
| 6 | GO:0009941: chloroplast envelope | 1.14E-04 |
| 7 | GO:0009501: amyloplast | 1.43E-04 |
| 8 | GO:0009569: chloroplast starch grain | 4.10E-04 |
| 9 | GO:0043036: starch grain | 4.10E-04 |
| 10 | GO:0031977: thylakoid lumen | 5.97E-04 |
| 11 | GO:0010007: magnesium chelatase complex | 6.69E-04 |
| 12 | GO:0033281: TAT protein transport complex | 6.69E-04 |
| 13 | GO:0042651: thylakoid membrane | 7.90E-04 |
| 14 | GO:0008076: voltage-gated potassium channel complex | 9.55E-04 |
| 15 | GO:0009517: PSII associated light-harvesting complex II | 1.27E-03 |
| 16 | GO:0009579: thylakoid | 1.82E-03 |
| 17 | GO:0010287: plastoglobule | 1.84E-03 |
| 18 | GO:0009543: chloroplast thylakoid lumen | 1.97E-03 |
| 19 | GO:0031982: vesicle | 3.24E-03 |
| 20 | GO:0031901: early endosome membrane | 4.20E-03 |
| 21 | GO:0016459: myosin complex | 5.24E-03 |
| 22 | GO:0032040: small-subunit processome | 6.35E-03 |
| 23 | GO:0031969: chloroplast membrane | 6.77E-03 |
| 24 | GO:0030095: chloroplast photosystem II | 7.55E-03 |
| 25 | GO:0030076: light-harvesting complex | 8.18E-03 |
| 26 | GO:0009654: photosystem II oxygen evolving complex | 1.02E-02 |
| 27 | GO:0015935: small ribosomal subunit | 1.09E-02 |
| 28 | GO:0005623: cell | 1.29E-02 |
| 29 | GO:0009522: photosystem I | 1.62E-02 |
| 30 | GO:0009523: photosystem II | 1.70E-02 |
| 31 | GO:0019898: extrinsic component of membrane | 1.70E-02 |
| 32 | GO:0010319: stromule | 2.14E-02 |
| 33 | GO:0031201: SNARE complex | 3.76E-02 |