co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G23200

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:2000117: negative regulation of cysteine-type endopeptidase activity	0.00E+00
2	GO:0042964: thioredoxin reduction	2.53E-05
3	GO:0046939: nucleotide phosphorylation	6.44E-05
4	GO:1902000: homogentisate catabolic process	6.44E-05
5	GO:0009072: aromatic amino acid family metabolic process	1.13E-04
6	GO:0044375: regulation of peroxisome size	1.13E-04
7	GO:0009851: auxin biosynthetic process	1.20E-04
8	GO:0046836: glycolipid transport	1.69E-04
9	GO:0006888: ER to Golgi vesicle-mediated transport	2.28E-04
10	GO:0009407: toxin catabolic process	2.81E-04
11	GO:0006564: L-serine biosynthetic process	2.95E-04
12	GO:0097428: protein maturation by iron-sulfur cluster transfer	2.95E-04
13	GO:0009082: branched-chain amino acid biosynthetic process	4.36E-04
14	GO:0009099: valine biosynthetic process	4.36E-04
15	GO:0009554: megasporogenesis	4.36E-04
16	GO:0071669: plant-type cell wall organization or biogenesis	5.11E-04
17	GO:0006102: isocitrate metabolic process	5.89E-04
18	GO:0016559: peroxisome fission	5.89E-04
19	GO:0022900: electron transport chain	6.69E-04
20	GO:0019430: removal of superoxide radicals	6.69E-04
21	GO:0009097: isoleucine biosynthetic process	6.69E-04
22	GO:0009098: leucine biosynthetic process	8.38E-04
23	GO:0009688: abscisic acid biosynthetic process	9.24E-04
24	GO:0043069: negative regulation of programmed cell death	9.24E-04
25	GO:0052544: defense response by callose deposition in cell wall	1.01E-03
26	GO:0016925: protein sumoylation	1.11E-03
27	GO:0055046: microgametogenesis	1.20E-03
28	GO:0007031: peroxisome organization	1.40E-03
29	GO:0007030: Golgi organization	1.40E-03
30	GO:0010167: response to nitrate	1.40E-03
31	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.45E-03
32	GO:0000162: tryptophan biosynthetic process	1.50E-03
33	GO:0048278: vesicle docking	1.83E-03
34	GO:0042742: defense response to bacterium	2.02E-03
35	GO:0009561: megagametogenesis	2.18E-03
36	GO:0009306: protein secretion	2.18E-03
37	GO:0061025: membrane fusion	2.68E-03
38	GO:0009630: gravitropism	3.07E-03
39	GO:1901657: glycosyl compound metabolic process	3.21E-03
40	GO:0009751: response to salicylic acid	3.56E-03
41	GO:0009816: defense response to bacterium, incompatible interaction	3.91E-03
42	GO:0006906: vesicle fusion	4.06E-03
43	GO:0016049: cell growth	4.36E-03
44	GO:0008219: cell death	4.52E-03
45	GO:0006499: N-terminal protein myristoylation	4.83E-03
46	GO:0006099: tricarboxylic acid cycle	5.47E-03
47	GO:0009735: response to cytokinin	5.83E-03
48	GO:0051707: response to other organism	6.32E-03
49	GO:0000209: protein polyubiquitination	6.50E-03
50	GO:0009636: response to toxic substance	6.85E-03
51	GO:0031347: regulation of defense response	7.22E-03
52	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	7.22E-03
53	GO:0009846: pollen germination	7.40E-03
54	GO:0051603: proteolysis involved in cellular protein catabolic process	7.97E-03
55	GO:0048316: seed development	8.93E-03
56	GO:0009626: plant-type hypersensitive response	9.13E-03
57	GO:0051726: regulation of cell cycle	1.04E-02
58	GO:0009739: response to gibberellin	1.58E-02
59	GO:0009826: unidimensional cell growth	1.94E-02
60	GO:0046686: response to cadmium ion	2.02E-02
61	GO:0009860: pollen tube growth	2.10E-02
62	GO:0080167: response to karrikin	2.32E-02
63	GO:0016192: vesicle-mediated transport	2.41E-02
64	GO:0045454: cell redox homeostasis	2.64E-02
65	GO:0006886: intracellular protein transport	2.70E-02
66	GO:0016042: lipid catabolic process	3.01E-02
67	GO:0006281: DNA repair	3.07E-02
68	GO:0006629: lipid metabolic process	3.07E-02
69	GO:0006357: regulation of transcription from RNA polymerase II promoter	3.75E-02
70	GO:0016567: protein ubiquitination	3.94E-02

Rank	GO Term	Adjusted P value
1	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
2	GO:0010175: sphingosine transmembrane transporter activity	0.00E+00
3	GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity	2.53E-05
4	GO:0033984: indole-3-glycerol-phosphate lyase activity	2.53E-05
5	GO:0052739: phosphatidylserine 1-acylhydrolase activity	6.44E-05
6	GO:0052740: 1-acyl-2-lysophosphatidylserine acylhydrolase activity	6.44E-05
7	GO:0052654: L-leucine transaminase activity	1.69E-04
8	GO:0052655: L-valine transaminase activity	1.69E-04
9	GO:0017089: glycolipid transporter activity	1.69E-04
10	GO:0019201: nucleotide kinase activity	1.69E-04
11	GO:0004449: isocitrate dehydrogenase (NAD+) activity	1.69E-04
12	GO:0052656: L-isoleucine transaminase activity	1.69E-04
13	GO:0004834: tryptophan synthase activity	2.30E-04
14	GO:0051861: glycolipid binding	2.30E-04
15	GO:0004084: branched-chain-amino-acid transaminase activity	2.30E-04
16	GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity	2.30E-04
17	GO:0004031: aldehyde oxidase activity	2.30E-04
18	GO:0050302: indole-3-acetaldehyde oxidase activity	2.30E-04
19	GO:0008374: O-acyltransferase activity	2.95E-04
20	GO:0031386: protein tag	2.95E-04
21	GO:0004364: glutathione transferase activity	3.99E-04
22	GO:0004017: adenylate kinase activity	4.36E-04
23	GO:0008121: ubiquinol-cytochrome-c reductase activity	5.11E-04
24	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	6.69E-04
25	GO:0043531: ADP binding	2.18E-03
26	GO:0004527: exonuclease activity	2.55E-03
27	GO:0004791: thioredoxin-disulfide reductase activity	2.68E-03
28	GO:0102483: scopolin beta-glucosidase activity	4.21E-03
29	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	4.99E-03
30	GO:0008422: beta-glucosidase activity	5.64E-03
31	GO:0000149: SNARE binding	5.64E-03
32	GO:0005484: SNAP receptor activity	6.32E-03
33	GO:0051537: 2 iron, 2 sulfur cluster binding	6.67E-03
34	GO:0005198: structural molecule activity	6.85E-03
35	GO:0051287: NAD binding	7.22E-03
36	GO:0016740: transferase activity	7.77E-03
37	GO:0042802: identical protein binding	1.73E-02
38	GO:0000287: magnesium ion binding	1.97E-02
39	GO:0004601: peroxidase activity	1.99E-02
40	GO:0050660: flavin adenine dinucleotide binding	2.21E-02
41	GO:0061630: ubiquitin protein ligase activity	2.41E-02
42	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	2.64E-02
43	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	2.85E-02
44	GO:0003924: GTPase activity	3.07E-02
45	GO:0009055: electron carrier activity	3.23E-02
46	GO:0008270: zinc ion binding	3.90E-02

Rank	GO Term	Adjusted P value
1	GO:0030173: integral component of Golgi membrane	4.36E-04
2	GO:0005779: integral component of peroxisomal membrane	6.69E-04
3	GO:0031901: early endosome membrane	7.52E-04
4	GO:0031090: organelle membrane	7.52E-04
5	GO:0005750: mitochondrial respiratory chain complex III	1.30E-03
6	GO:0009504: cell plate	2.80E-03
7	GO:0016592: mediator complex	3.07E-03
8	GO:0005778: peroxisomal membrane	3.48E-03
9	GO:0015934: large ribosomal subunit	4.99E-03
10	GO:0031201: SNARE complex	5.98E-03
11	GO:0005768: endosome	1.16E-02
12	GO:0005759: mitochondrial matrix	1.37E-02
13	GO:0000139: Golgi membrane	1.75E-02
14	GO:0043231: intracellular membrane-bounded organelle	3.29E-02