Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G22950

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0071327: cellular response to trehalose stimulus0.00E+00
2GO:0090359: negative regulation of abscisic acid biosynthetic process0.00E+00
3GO:1900367: positive regulation of defense response to insect0.00E+00
4GO:0002764: immune response-regulating signaling pathway0.00E+00
5GO:0032515: negative regulation of phosphoprotein phosphatase activity0.00E+00
6GO:0009312: oligosaccharide biosynthetic process0.00E+00
7GO:0045227: capsule polysaccharide biosynthetic process4.12E-05
8GO:0033358: UDP-L-arabinose biosynthetic process4.12E-05
9GO:0010150: leaf senescence1.47E-04
10GO:0009751: response to salicylic acid2.05E-04
11GO:0046256: 2,4,6-trinitrotoluene catabolic process2.43E-04
12GO:0019567: arabinose biosynthetic process2.43E-04
13GO:1901183: positive regulation of camalexin biosynthetic process2.43E-04
14GO:1900426: positive regulation of defense response to bacterium3.94E-04
15GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway3.94E-04
16GO:0010271: regulation of chlorophyll catabolic process5.39E-04
17GO:0019725: cellular homeostasis5.39E-04
18GO:0006123: mitochondrial electron transport, cytochrome c to oxygen5.39E-04
19GO:0080151: positive regulation of salicylic acid mediated signaling pathway5.39E-04
20GO:0010618: aerenchyma formation5.39E-04
21GO:0031349: positive regulation of defense response5.39E-04
22GO:0010115: regulation of abscisic acid biosynthetic process5.39E-04
23GO:0015865: purine nucleotide transport5.39E-04
24GO:0009225: nucleotide-sugar metabolic process8.68E-04
25GO:0010167: response to nitrate8.68E-04
26GO:0034051: negative regulation of plant-type hypersensitive response8.75E-04
27GO:0016045: detection of bacterium8.75E-04
28GO:0010359: regulation of anion channel activity8.75E-04
29GO:0009863: salicylic acid mediated signaling pathway1.06E-03
30GO:0046902: regulation of mitochondrial membrane permeability1.25E-03
31GO:0072583: clathrin-dependent endocytosis1.25E-03
32GO:0031348: negative regulation of defense response1.40E-03
33GO:0071456: cellular response to hypoxia1.40E-03
34GO:0009625: response to insect1.53E-03
35GO:0006012: galactose metabolic process1.53E-03
36GO:0080142: regulation of salicylic acid biosynthetic process1.67E-03
37GO:0006468: protein phosphorylation2.08E-03
38GO:0018344: protein geranylgeranylation2.13E-03
39GO:0010225: response to UV-C2.13E-03
40GO:0009247: glycolipid biosynthetic process2.13E-03
41GO:0009626: plant-type hypersensitive response2.15E-03
42GO:0010200: response to chitin2.60E-03
43GO:0010337: regulation of salicylic acid metabolic process2.62E-03
44GO:0010942: positive regulation of cell death2.62E-03
45GO:0010310: regulation of hydrogen peroxide metabolic process3.15E-03
46GO:0080036: regulation of cytokinin-activated signaling pathway3.15E-03
47GO:0071470: cellular response to osmotic stress3.15E-03
48GO:0009423: chorismate biosynthetic process3.15E-03
49GO:0031930: mitochondria-nucleus signaling pathway3.15E-03
50GO:0045926: negative regulation of growth3.15E-03
51GO:1900057: positive regulation of leaf senescence3.72E-03
52GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c3.72E-03
53GO:0019375: galactolipid biosynthetic process4.31E-03
54GO:0031540: regulation of anthocyanin biosynthetic process4.31E-03
55GO:0010928: regulation of auxin mediated signaling pathway4.31E-03
56GO:0009787: regulation of abscisic acid-activated signaling pathway4.31E-03
57GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline4.31E-03
58GO:0009819: drought recovery4.31E-03
59GO:0006950: response to stress4.37E-03
60GO:0010204: defense response signaling pathway, resistance gene-independent4.93E-03
61GO:2000031: regulation of salicylic acid mediated signaling pathway4.93E-03
62GO:0010099: regulation of photomorphogenesis4.93E-03
63GO:0006952: defense response5.34E-03
64GO:0010112: regulation of systemic acquired resistance5.59E-03
65GO:0051865: protein autoubiquitination5.59E-03
66GO:0009867: jasmonic acid mediated signaling pathway6.13E-03
67GO:0048268: clathrin coat assembly6.27E-03
68GO:0010380: regulation of chlorophyll biosynthetic process6.27E-03
69GO:0009870: defense response signaling pathway, resistance gene-dependent6.99E-03
70GO:0015770: sucrose transport7.73E-03
71GO:0019684: photosynthesis, light reaction7.73E-03
72GO:0009089: lysine biosynthetic process via diaminopimelate7.73E-03
73GO:0009073: aromatic amino acid family biosynthetic process7.73E-03
74GO:0051707: response to other organism7.90E-03
75GO:0010105: negative regulation of ethylene-activated signaling pathway8.49E-03
76GO:0008361: regulation of cell size8.49E-03
77GO:0002213: defense response to insect8.49E-03
78GO:0015706: nitrate transport8.49E-03
79GO:0006855: drug transmembrane transport9.23E-03
80GO:2000028: regulation of photoperiodism, flowering9.29E-03
81GO:0006829: zinc II ion transport9.29E-03
82GO:0042742: defense response to bacterium9.55E-03
83GO:0006812: cation transport9.93E-03
84GO:0009266: response to temperature stimulus1.01E-02
85GO:0007034: vacuolar transport1.01E-02
86GO:0005985: sucrose metabolic process1.10E-02
87GO:0046688: response to copper ion1.10E-02
88GO:0007165: signal transduction1.19E-02
89GO:0009737: response to abscisic acid1.24E-02
90GO:2000377: regulation of reactive oxygen species metabolic process1.27E-02
91GO:0045333: cellular respiration1.27E-02
92GO:0080147: root hair cell development1.27E-02
93GO:0006825: copper ion transport1.37E-02
94GO:0009620: response to fungus1.39E-02
95GO:0009269: response to desiccation1.46E-02
96GO:0055085: transmembrane transport1.53E-02
97GO:2000022: regulation of jasmonic acid mediated signaling pathway1.56E-02
98GO:0030433: ubiquitin-dependent ERAD pathway1.56E-02
99GO:0010017: red or far-red light signaling pathway1.56E-02
100GO:0016226: iron-sulfur cluster assembly1.56E-02
101GO:0042391: regulation of membrane potential1.97E-02
102GO:0009753: response to jasmonic acid2.07E-02
103GO:0006885: regulation of pH2.07E-02
104GO:0048544: recognition of pollen2.18E-02
105GO:0009749: response to glucose2.29E-02
106GO:0010193: response to ozone2.41E-02
107GO:0048235: pollen sperm cell differentiation2.52E-02
108GO:0007264: small GTPase mediated signal transduction2.52E-02
109GO:0016032: viral process2.52E-02
110GO:0006914: autophagy2.76E-02
111GO:0006904: vesicle docking involved in exocytosis2.88E-02
112GO:0009739: response to gibberellin2.95E-02
113GO:0016579: protein deubiquitination3.01E-02
114GO:0006470: protein dephosphorylation3.01E-02
115GO:0007275: multicellular organism development3.03E-02
116GO:0001666: response to hypoxia3.13E-02
117GO:0009617: response to bacterium3.15E-02
118GO:0009788: negative regulation of abscisic acid-activated signaling pathway3.26E-02
119GO:0009816: defense response to bacterium, incompatible interaction3.26E-02
120GO:0009627: systemic acquired resistance3.39E-02
121GO:0042128: nitrate assimilation3.39E-02
122GO:0009832: plant-type cell wall biogenesis3.92E-02
123GO:0000160: phosphorelay signal transduction system3.92E-02
124GO:0009611: response to wounding3.97E-02
125GO:0006499: N-terminal protein myristoylation4.05E-02
126GO:0009407: toxin catabolic process4.05E-02
127GO:0010043: response to zinc ion4.19E-02
128GO:0007568: aging4.19E-02
129GO:0048527: lateral root development4.19E-02
130GO:0010119: regulation of stomatal movement4.19E-02
131GO:0045893: positive regulation of transcription, DNA-templated4.58E-02
132GO:0048366: leaf development4.78E-02
RankGO TermAdjusted P value
1GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor0.00E+00
2GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity0.00E+00
3GO:0004865: protein serine/threonine phosphatase inhibitor activity0.00E+00
4GO:0004107: chorismate synthase activity0.00E+00
5GO:0005212: structural constituent of eye lens0.00E+00
6GO:0050373: UDP-arabinose 4-epimerase activity4.12E-05
7GO:0043424: protein histidine kinase binding8.17E-05
8GO:0003978: UDP-glucose 4-epimerase activity1.32E-04
9GO:0046481: digalactosyldiacylglycerol synthase activity2.43E-04
10GO:0010285: L,L-diaminopimelate aminotransferase activity2.43E-04
11GO:0032050: clathrin heavy chain binding2.43E-04
12GO:0004662: CAAX-protein geranylgeranyltransferase activity2.43E-04
13GO:0008375: acetylglucosaminyltransferase activity4.91E-04
14GO:0008559: xenobiotic-transporting ATPase activity5.33E-04
15GO:0048531: beta-1,3-galactosyltransferase activity5.39E-04
16GO:0016531: copper chaperone activity8.75E-04
17GO:0035250: UDP-galactosyltransferase activity1.25E-03
18GO:0004674: protein serine/threonine kinase activity1.49E-03
19GO:0009916: alternative oxidase activity1.67E-03
20GO:0019199: transmembrane receptor protein kinase activity1.67E-03
21GO:0005471: ATP:ADP antiporter activity2.13E-03
22GO:0070696: transmembrane receptor protein serine/threonine kinase binding2.13E-03
23GO:0004656: procollagen-proline 4-dioxygenase activity3.15E-03
24GO:0009927: histidine phosphotransfer kinase activity3.15E-03
25GO:0043295: glutathione binding3.72E-03
26GO:0008506: sucrose:proton symporter activity3.72E-03
27GO:0015238: drug transmembrane transporter activity5.08E-03
28GO:0015112: nitrate transmembrane transporter activity6.27E-03
29GO:0042626: ATPase activity, coupled to transmembrane movement of substances6.82E-03
30GO:0004568: chitinase activity6.99E-03
31GO:0005545: 1-phosphatidylinositol binding6.99E-03
32GO:0004713: protein tyrosine kinase activity6.99E-03
33GO:0008515: sucrose transmembrane transporter activity7.73E-03
34GO:0005543: phospholipid binding7.73E-03
35GO:0016301: kinase activity8.87E-03
36GO:0030552: cAMP binding1.10E-02
37GO:0030553: cGMP binding1.10E-02
38GO:0031625: ubiquitin protein ligase binding1.18E-02
39GO:0031418: L-ascorbic acid binding1.27E-02
40GO:0003954: NADH dehydrogenase activity1.27E-02
41GO:0005216: ion channel activity1.37E-02
42GO:0008324: cation transmembrane transporter activity1.37E-02
43GO:0004842: ubiquitin-protein transferase activity1.67E-02
44GO:0005451: monovalent cation:proton antiporter activity1.97E-02
45GO:0005249: voltage-gated potassium channel activity1.97E-02
46GO:0030551: cyclic nucleotide binding1.97E-02
47GO:0046873: metal ion transmembrane transporter activity2.07E-02
48GO:0030276: clathrin binding2.07E-02
49GO:0015299: solute:proton antiporter activity2.18E-02
50GO:0010181: FMN binding2.18E-02
51GO:0004872: receptor activity2.29E-02
52GO:0004843: thiol-dependent ubiquitin-specific protease activity2.41E-02
53GO:0015297: antiporter activity2.52E-02
54GO:0015385: sodium:proton antiporter activity2.64E-02
55GO:0008483: transaminase activity2.88E-02
56GO:0005515: protein binding3.46E-02
57GO:0004806: triglyceride lipase activity3.52E-02
58GO:0005215: transporter activity3.54E-02
59GO:0008757: S-adenosylmethionine-dependent methyltransferase activity3.65E-02
60GO:0046982: protein heterodimerization activity4.00E-02
61GO:0043531: ADP binding4.46E-02
62GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors4.48E-02
63GO:0000987: core promoter proximal region sequence-specific DNA binding4.62E-02
64GO:0004712: protein serine/threonine/tyrosine kinase activity4.76E-02
RankGO TermAdjusted P value
1GO:0005758: mitochondrial intermembrane space7.01E-05
2GO:0005953: CAAX-protein geranylgeranyltransferase complex2.43E-04
3GO:0031304: intrinsic component of mitochondrial inner membrane5.39E-04
4GO:0005901: caveola5.39E-04
5GO:0030139: endocytic vesicle8.75E-04
6GO:0070469: respiratory chain1.17E-03
7GO:0000813: ESCRT I complex2.13E-03
8GO:0000164: protein phosphatase type 1 complex2.13E-03
9GO:0016021: integral component of membrane2.85E-03
10GO:0032580: Golgi cisterna membrane3.11E-03
11GO:0000421: autophagosome membrane4.31E-03
12GO:0005886: plasma membrane5.36E-03
13GO:0000325: plant-type vacuole5.59E-03
14GO:0005740: mitochondrial envelope6.99E-03
15GO:0030125: clathrin vesicle coat6.99E-03
16GO:0005795: Golgi stack1.10E-02
17GO:0005905: clathrin-coated pit1.46E-02
18GO:0012505: endomembrane system1.48E-02
19GO:0031410: cytoplasmic vesicle1.56E-02
20GO:0030136: clathrin-coated vesicle1.86E-02
21GO:0005770: late endosome2.07E-02
22GO:0005794: Golgi apparatus2.23E-02
23GO:0000145: exocyst2.52E-02
24GO:0005774: vacuolar membrane3.11E-02
25GO:0009707: chloroplast outer membrane3.78E-02
26GO:0000786: nucleosome4.33E-02
27GO:0005737: cytoplasm4.86E-02
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Gene type



Gene DE type