GO Enrichment Analysis of Co-expressed Genes with
AT3G22845
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010499: proteasomal ubiquitin-independent protein catabolic process | 0.00E+00 |
| 2 | GO:0009173: pyrimidine ribonucleoside monophosphate metabolic process | 0.00E+00 |
| 3 | GO:0006903: vesicle targeting | 0.00E+00 |
| 4 | GO:0080149: sucrose induced translational repression | 0.00E+00 |
| 5 | GO:0010421: hydrogen peroxide-mediated programmed cell death | 5.64E-05 |
| 6 | GO:0055046: microgametogenesis | 8.84E-05 |
| 7 | GO:0009805: coumarin biosynthetic process | 1.37E-04 |
| 8 | GO:0002215: defense response to nematode | 1.37E-04 |
| 9 | GO:0006612: protein targeting to membrane | 3.41E-04 |
| 10 | GO:0006893: Golgi to plasma membrane transport | 3.41E-04 |
| 11 | GO:0051782: negative regulation of cell division | 3.41E-04 |
| 12 | GO:0071786: endoplasmic reticulum tubular network organization | 3.41E-04 |
| 13 | GO:0070676: intralumenal vesicle formation | 3.41E-04 |
| 14 | GO:0072334: UDP-galactose transmembrane transport | 3.41E-04 |
| 15 | GO:0032968: positive regulation of transcription elongation from RNA polymerase II promoter | 4.56E-04 |
| 16 | GO:0033320: UDP-D-xylose biosynthetic process | 4.56E-04 |
| 17 | GO:0006085: acetyl-CoA biosynthetic process | 4.56E-04 |
| 18 | GO:0006221: pyrimidine nucleotide biosynthetic process | 4.56E-04 |
| 19 | GO:0005513: detection of calcium ion | 5.78E-04 |
| 20 | GO:0045040: protein import into mitochondrial outer membrane | 7.07E-04 |
| 21 | GO:0006555: methionine metabolic process | 7.07E-04 |
| 22 | GO:0043248: proteasome assembly | 7.07E-04 |
| 23 | GO:0042732: D-xylose metabolic process | 7.07E-04 |
| 24 | GO:0042176: regulation of protein catabolic process | 7.07E-04 |
| 25 | GO:0009612: response to mechanical stimulus | 8.44E-04 |
| 26 | GO:0017148: negative regulation of translation | 8.44E-04 |
| 27 | GO:0019509: L-methionine salvage from methylthioadenosine | 8.44E-04 |
| 28 | GO:0016192: vesicle-mediated transport | 9.75E-04 |
| 29 | GO:0006744: ubiquinone biosynthetic process | 9.85E-04 |
| 30 | GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process | 9.85E-04 |
| 31 | GO:0006887: exocytosis | 1.02E-03 |
| 32 | GO:0006491: N-glycan processing | 1.13E-03 |
| 33 | GO:0006367: transcription initiation from RNA polymerase II promoter | 1.29E-03 |
| 34 | GO:0009699: phenylpropanoid biosynthetic process | 1.29E-03 |
| 35 | GO:0060321: acceptance of pollen | 1.29E-03 |
| 36 | GO:0009846: pollen germination | 1.37E-03 |
| 37 | GO:0000902: cell morphogenesis | 1.45E-03 |
| 38 | GO:0015780: nucleotide-sugar transport | 1.45E-03 |
| 39 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.52E-03 |
| 40 | GO:0048354: mucilage biosynthetic process involved in seed coat development | 1.62E-03 |
| 41 | GO:0072593: reactive oxygen species metabolic process | 1.97E-03 |
| 42 | GO:0006626: protein targeting to mitochondrion | 2.36E-03 |
| 43 | GO:0007034: vacuolar transport | 2.56E-03 |
| 44 | GO:0007033: vacuole organization | 2.76E-03 |
| 45 | GO:0009225: nucleotide-sugar metabolic process | 2.76E-03 |
| 46 | GO:0007031: peroxisome organization | 2.76E-03 |
| 47 | GO:0046686: response to cadmium ion | 2.85E-03 |
| 48 | GO:0042023: DNA endoreduplication | 2.97E-03 |
| 49 | GO:0000027: ribosomal large subunit assembly | 3.18E-03 |
| 50 | GO:0008299: isoprenoid biosynthetic process | 3.40E-03 |
| 51 | GO:0019748: secondary metabolic process | 3.86E-03 |
| 52 | GO:0009561: megagametogenesis | 4.34E-03 |
| 53 | GO:0034220: ion transmembrane transport | 4.83E-03 |
| 54 | GO:0006623: protein targeting to vacuole | 5.61E-03 |
| 55 | GO:0009860: pollen tube growth | 5.89E-03 |
| 56 | GO:0030163: protein catabolic process | 6.43E-03 |
| 57 | GO:0019760: glucosinolate metabolic process | 6.71E-03 |
| 58 | GO:0006904: vesicle docking involved in exocytosis | 7.00E-03 |
| 59 | GO:0006906: vesicle fusion | 8.19E-03 |
| 60 | GO:0009817: defense response to fungus, incompatible interaction | 9.13E-03 |
| 61 | GO:0006499: N-terminal protein myristoylation | 9.78E-03 |
| 62 | GO:0006811: ion transport | 9.78E-03 |
| 63 | GO:0015031: protein transport | 1.01E-02 |
| 64 | GO:0009744: response to sucrose | 1.29E-02 |
| 65 | GO:0000209: protein polyubiquitination | 1.33E-02 |
| 66 | GO:0008643: carbohydrate transport | 1.36E-02 |
| 67 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 1.48E-02 |
| 68 | GO:0006486: protein glycosylation | 1.59E-02 |
| 69 | GO:0009555: pollen development | 1.78E-02 |
| 70 | GO:0009553: embryo sac development | 2.00E-02 |
| 71 | GO:0051726: regulation of cell cycle | 2.13E-02 |
| 72 | GO:0006511: ubiquitin-dependent protein catabolic process | 2.42E-02 |
| 73 | GO:0006414: translational elongation | 2.66E-02 |
| 74 | GO:0009790: embryo development | 2.68E-02 |
| 75 | GO:0006633: fatty acid biosynthetic process | 2.82E-02 |
| 76 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 3.27E-02 |
| 77 | GO:0006470: protein dephosphorylation | 3.32E-02 |
| 78 | GO:0009617: response to bacterium | 3.42E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016504: peptidase activator activity | 0.00E+00 |
| 2 | GO:0070577: lysine-acetylated histone binding | 0.00E+00 |
| 3 | GO:0004190: aspartic-type endopeptidase activity | 1.16E-04 |
| 4 | GO:0010297: heteropolysaccharide binding | 1.37E-04 |
| 5 | GO:0050347: trans-octaprenyltranstransferase activity | 1.37E-04 |
| 6 | GO:0052924: all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity | 1.37E-04 |
| 7 | GO:0004127: cytidylate kinase activity | 1.37E-04 |
| 8 | GO:0008805: carbon-monoxide oxygenase activity | 1.37E-04 |
| 9 | GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity | 2.34E-04 |
| 10 | GO:0004571: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity | 3.41E-04 |
| 11 | GO:0003878: ATP citrate synthase activity | 3.41E-04 |
| 12 | GO:0009041: uridylate kinase activity | 3.41E-04 |
| 13 | GO:0070628: proteasome binding | 4.56E-04 |
| 14 | GO:0008022: protein C-terminus binding | 4.56E-04 |
| 15 | GO:0004659: prenyltransferase activity | 4.56E-04 |
| 16 | GO:0005459: UDP-galactose transmembrane transporter activity | 5.78E-04 |
| 17 | GO:0031593: polyubiquitin binding | 7.07E-04 |
| 18 | GO:0048040: UDP-glucuronate decarboxylase activity | 7.07E-04 |
| 19 | GO:0004559: alpha-mannosidase activity | 8.44E-04 |
| 20 | GO:0070403: NAD+ binding | 8.44E-04 |
| 21 | GO:0003746: translation elongation factor activity | 8.69E-04 |
| 22 | GO:0005338: nucleotide-sugar transmembrane transporter activity | 9.85E-04 |
| 23 | GO:0030234: enzyme regulator activity | 1.79E-03 |
| 24 | GO:0004161: dimethylallyltranstransferase activity | 1.97E-03 |
| 25 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 2.56E-03 |
| 26 | GO:0043130: ubiquitin binding | 3.18E-03 |
| 27 | GO:0004298: threonine-type endopeptidase activity | 3.63E-03 |
| 28 | GO:0046982: protein heterodimerization activity | 5.37E-03 |
| 29 | GO:0061630: ubiquitin protein ligase activity | 7.13E-03 |
| 30 | GO:0051213: dioxygenase activity | 7.59E-03 |
| 31 | GO:0015250: water channel activity | 7.59E-03 |
| 32 | GO:0003824: catalytic activity | 8.39E-03 |
| 33 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 9.13E-03 |
| 34 | GO:0050897: cobalt ion binding | 1.01E-02 |
| 35 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 1.08E-02 |
| 36 | GO:0000149: SNARE binding | 1.15E-02 |
| 37 | GO:0005484: SNAP receptor activity | 1.29E-02 |
| 38 | GO:0031625: ubiquitin protein ligase binding | 1.71E-02 |
| 39 | GO:0022857: transmembrane transporter activity | 1.96E-02 |
| 40 | GO:0015297: antiporter activity | 2.92E-02 |
| 41 | GO:0005525: GTP binding | 2.93E-02 |
| 42 | GO:0005509: calcium ion binding | 3.33E-02 |
| 43 | GO:0042802: identical protein binding | 3.58E-02 |
| 44 | GO:0050660: flavin adenine dinucleotide binding | 4.57E-02 |
| 45 | GO:0016491: oxidoreductase activity | 4.73E-02 |
| 46 | GO:0008233: peptidase activity | 4.74E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane | 2.31E-05 |
| 2 | GO:0009510: plasmodesmatal desmotubule | 5.64E-05 |
| 3 | GO:0000502: proteasome complex | 1.19E-04 |
| 4 | GO:0005839: proteasome core complex | 1.80E-04 |
| 5 | GO:0071782: endoplasmic reticulum tubular network | 3.41E-04 |
| 6 | GO:0009346: citrate lyase complex | 3.41E-04 |
| 7 | GO:0030660: Golgi-associated vesicle membrane | 4.56E-04 |
| 8 | GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane | 4.56E-04 |
| 9 | GO:0005788: endoplasmic reticulum lumen | 5.66E-04 |
| 10 | GO:0000815: ESCRT III complex | 8.44E-04 |
| 11 | GO:0031982: vesicle | 1.13E-03 |
| 12 | GO:0005742: mitochondrial outer membrane translocase complex | 1.29E-03 |
| 13 | GO:0031901: early endosome membrane | 1.45E-03 |
| 14 | GO:0005765: lysosomal membrane | 1.97E-03 |
| 15 | GO:0008541: proteasome regulatory particle, lid subcomplex | 1.97E-03 |
| 16 | GO:0005783: endoplasmic reticulum | 2.35E-03 |
| 17 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 4.34E-03 |
| 18 | GO:0005829: cytosol | 4.45E-03 |
| 19 | GO:0009504: cell plate | 5.61E-03 |
| 20 | GO:0000145: exocyst | 6.15E-03 |
| 21 | GO:0016592: mediator complex | 6.15E-03 |
| 22 | GO:0005778: peroxisomal membrane | 7.00E-03 |
| 23 | GO:0005667: transcription factor complex | 8.19E-03 |
| 24 | GO:0031201: SNARE complex | 1.22E-02 |
| 25 | GO:0005789: endoplasmic reticulum membrane | 1.28E-02 |
| 26 | GO:0005856: cytoskeleton | 1.40E-02 |
| 27 | GO:0005794: Golgi apparatus | 1.48E-02 |
| 28 | GO:0010008: endosome membrane | 1.83E-02 |
| 29 | GO:0009524: phragmoplast | 2.49E-02 |
| 30 | GO:0005768: endosome | 3.25E-02 |
| 31 | GO:0005615: extracellular space | 3.27E-02 |
| 32 | GO:0005886: plasma membrane | 3.56E-02 |
| 33 | GO:0005774: vacuolar membrane | 3.57E-02 |
| 34 | GO:0048046: apoplast | 3.79E-02 |
| 35 | GO:0005618: cell wall | 4.21E-02 |
| 36 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 4.40E-02 |
| 37 | GO:0009536: plastid | 4.41E-02 |
| 38 | GO:0000139: Golgi membrane | 4.86E-02 |