GO Enrichment Analysis of Co-expressed Genes with
AT3G22630
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006592: ornithine biosynthetic process | 0.00E+00 |
| 2 | GO:0006511: ubiquitin-dependent protein catabolic process | 6.72E-13 |
| 3 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 1.40E-07 |
| 4 | GO:0005513: detection of calcium ion | 1.69E-05 |
| 5 | GO:0030433: ubiquitin-dependent ERAD pathway | 1.87E-05 |
| 6 | GO:0043248: proteasome assembly | 2.57E-05 |
| 7 | GO:0071586: CAAX-box protein processing | 1.08E-04 |
| 8 | GO:0019628: urate catabolic process | 1.08E-04 |
| 9 | GO:0035494: SNARE complex disassembly | 1.08E-04 |
| 10 | GO:0006144: purine nucleobase metabolic process | 1.08E-04 |
| 11 | GO:0080120: CAAX-box protein maturation | 1.08E-04 |
| 12 | GO:0006695: cholesterol biosynthetic process | 2.52E-04 |
| 13 | GO:0010372: positive regulation of gibberellin biosynthetic process | 2.52E-04 |
| 14 | GO:0051788: response to misfolded protein | 2.52E-04 |
| 15 | GO:0051603: proteolysis involved in cellular protein catabolic process | 4.05E-04 |
| 16 | GO:0010498: proteasomal protein catabolic process | 4.19E-04 |
| 17 | GO:0010359: regulation of anion channel activity | 4.19E-04 |
| 18 | GO:0043617: cellular response to sucrose starvation | 4.19E-04 |
| 19 | GO:0090630: activation of GTPase activity | 4.19E-04 |
| 20 | GO:0010431: seed maturation | 4.33E-04 |
| 21 | GO:0002679: respiratory burst involved in defense response | 6.01E-04 |
| 22 | GO:0009647: skotomorphogenesis | 6.01E-04 |
| 23 | GO:0010255: glucose mediated signaling pathway | 6.01E-04 |
| 24 | GO:0001676: long-chain fatty acid metabolic process | 6.01E-04 |
| 25 | GO:0010483: pollen tube reception | 7.98E-04 |
| 26 | GO:0010363: regulation of plant-type hypersensitive response | 7.98E-04 |
| 27 | GO:0030163: protein catabolic process | 9.72E-04 |
| 28 | GO:0009823: cytokinin catabolic process | 1.01E-03 |
| 29 | GO:0018279: protein N-linked glycosylation via asparagine | 1.01E-03 |
| 30 | GO:0006564: L-serine biosynthetic process | 1.01E-03 |
| 31 | GO:0009612: response to mechanical stimulus | 1.47E-03 |
| 32 | GO:0010189: vitamin E biosynthetic process | 1.47E-03 |
| 33 | GO:0010555: response to mannitol | 1.47E-03 |
| 34 | GO:0048528: post-embryonic root development | 1.73E-03 |
| 35 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 2.00E-03 |
| 36 | GO:0006402: mRNA catabolic process | 2.00E-03 |
| 37 | GO:0050821: protein stabilization | 2.00E-03 |
| 38 | GO:0031540: regulation of anthocyanin biosynthetic process | 2.00E-03 |
| 39 | GO:0010099: regulation of photomorphogenesis | 2.28E-03 |
| 40 | GO:0001510: RNA methylation | 2.28E-03 |
| 41 | GO:0006526: arginine biosynthetic process | 2.28E-03 |
| 42 | GO:0046685: response to arsenic-containing substance | 2.57E-03 |
| 43 | GO:0046686: response to cadmium ion | 2.79E-03 |
| 44 | GO:0005982: starch metabolic process | 2.88E-03 |
| 45 | GO:0009651: response to salt stress | 3.18E-03 |
| 46 | GO:0043085: positive regulation of catalytic activity | 3.53E-03 |
| 47 | GO:0006820: anion transport | 3.87E-03 |
| 48 | GO:0016925: protein sumoylation | 3.87E-03 |
| 49 | GO:0006890: retrograde vesicle-mediated transport, Golgi to ER | 3.87E-03 |
| 50 | GO:0005986: sucrose biosynthetic process | 4.23E-03 |
| 51 | GO:0034605: cellular response to heat | 4.59E-03 |
| 52 | GO:0007031: peroxisome organization | 4.96E-03 |
| 53 | GO:0005985: sucrose metabolic process | 4.96E-03 |
| 54 | GO:0000162: tryptophan biosynthetic process | 5.35E-03 |
| 55 | GO:0006406: mRNA export from nucleus | 5.75E-03 |
| 56 | GO:0006487: protein N-linked glycosylation | 5.75E-03 |
| 57 | GO:0015992: proton transport | 6.56E-03 |
| 58 | GO:0010227: floral organ abscission | 7.42E-03 |
| 59 | GO:0019722: calcium-mediated signaling | 7.87E-03 |
| 60 | GO:0009561: megagametogenesis | 7.87E-03 |
| 61 | GO:0009306: protein secretion | 7.87E-03 |
| 62 | GO:0051028: mRNA transport | 8.32E-03 |
| 63 | GO:0010154: fruit development | 9.26E-03 |
| 64 | GO:0006662: glycerol ether metabolic process | 9.26E-03 |
| 65 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 9.39E-03 |
| 66 | GO:0009646: response to absence of light | 9.74E-03 |
| 67 | GO:0061025: membrane fusion | 9.74E-03 |
| 68 | GO:0009617: response to bacterium | 1.00E-02 |
| 69 | GO:0048825: cotyledon development | 1.02E-02 |
| 70 | GO:0010193: response to ozone | 1.07E-02 |
| 71 | GO:0016132: brassinosteroid biosynthetic process | 1.07E-02 |
| 72 | GO:0031047: gene silencing by RNA | 1.12E-02 |
| 73 | GO:1901657: glycosyl compound metabolic process | 1.18E-02 |
| 74 | GO:0016579: protein deubiquitination | 1.34E-02 |
| 75 | GO:0016126: sterol biosynthetic process | 1.39E-02 |
| 76 | GO:0009816: defense response to bacterium, incompatible interaction | 1.45E-02 |
| 77 | GO:0006888: ER to Golgi vesicle-mediated transport | 1.56E-02 |
| 78 | GO:0010411: xyloglucan metabolic process | 1.56E-02 |
| 79 | GO:0006950: response to stress | 1.56E-02 |
| 80 | GO:0009817: defense response to fungus, incompatible interaction | 1.68E-02 |
| 81 | GO:0010311: lateral root formation | 1.74E-02 |
| 82 | GO:0006811: ion transport | 1.80E-02 |
| 83 | GO:0006499: N-terminal protein myristoylation | 1.80E-02 |
| 84 | GO:0010119: regulation of stomatal movement | 1.86E-02 |
| 85 | GO:0010043: response to zinc ion | 1.86E-02 |
| 86 | GO:0000724: double-strand break repair via homologous recombination | 1.92E-02 |
| 87 | GO:0045454: cell redox homeostasis | 1.94E-02 |
| 88 | GO:0006886: intracellular protein transport | 2.00E-02 |
| 89 | GO:0034599: cellular response to oxidative stress | 2.05E-02 |
| 90 | GO:0006631: fatty acid metabolic process | 2.25E-02 |
| 91 | GO:0009744: response to sucrose | 2.38E-02 |
| 92 | GO:0000209: protein polyubiquitination | 2.45E-02 |
| 93 | GO:0042546: cell wall biogenesis | 2.45E-02 |
| 94 | GO:0009736: cytokinin-activated signaling pathway | 2.94E-02 |
| 95 | GO:0015031: protein transport | 3.03E-02 |
| 96 | GO:0009409: response to cold | 3.28E-02 |
| 97 | GO:0006096: glycolytic process | 3.32E-02 |
| 98 | GO:0009626: plant-type hypersensitive response | 3.47E-02 |
| 99 | GO:0009553: embryo sac development | 3.70E-02 |
| 100 | GO:0018105: peptidyl-serine phosphorylation | 3.86E-02 |
| 101 | GO:0006396: RNA processing | 3.86E-02 |
| 102 | GO:0009735: response to cytokinin | 3.87E-02 |
| 103 | GO:0009555: pollen development | 4.23E-02 |
| 104 | GO:0055114: oxidation-reduction process | 4.45E-02 |
| 105 | GO:0035556: intracellular signal transduction | 4.46E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009918: sterol delta7 reductase activity | 0.00E+00 |
| 2 | GO:0004846: urate oxidase activity | 0.00E+00 |
| 3 | GO:0008777: acetylornithine deacetylase activity | 0.00E+00 |
| 4 | GO:0047598: 7-dehydrocholesterol reductase activity | 0.00E+00 |
| 5 | GO:0004298: threonine-type endopeptidase activity | 1.54E-13 |
| 6 | GO:0036402: proteasome-activating ATPase activity | 1.40E-07 |
| 7 | GO:0008233: peptidase activity | 1.87E-07 |
| 8 | GO:0017025: TBP-class protein binding | 7.92E-06 |
| 9 | GO:0015157: oligosaccharide transmembrane transporter activity | 1.08E-04 |
| 10 | GO:0051879: Hsp90 protein binding | 2.52E-04 |
| 11 | GO:0004617: phosphoglycerate dehydrogenase activity | 2.52E-04 |
| 12 | GO:0004175: endopeptidase activity | 2.55E-04 |
| 13 | GO:0004848: ureidoglycolate hydrolase activity | 4.19E-04 |
| 14 | GO:0004557: alpha-galactosidase activity | 4.19E-04 |
| 15 | GO:0052692: raffinose alpha-galactosidase activity | 4.19E-04 |
| 16 | GO:0005483: soluble NSF attachment protein activity | 4.19E-04 |
| 17 | GO:0003863: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity | 4.19E-04 |
| 18 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 6.01E-04 |
| 19 | GO:0004834: tryptophan synthase activity | 7.98E-04 |
| 20 | GO:0019905: syntaxin binding | 7.98E-04 |
| 21 | GO:0004518: nuclease activity | 9.14E-04 |
| 22 | GO:0019139: cytokinin dehydrogenase activity | 1.01E-03 |
| 23 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 1.01E-03 |
| 24 | GO:0031386: protein tag | 1.01E-03 |
| 25 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 1.43E-03 |
| 26 | GO:0102391: decanoate--CoA ligase activity | 1.47E-03 |
| 27 | GO:0004656: procollagen-proline 4-dioxygenase activity | 1.47E-03 |
| 28 | GO:0016157: sucrose synthase activity | 1.47E-03 |
| 29 | GO:0051920: peroxiredoxin activity | 1.47E-03 |
| 30 | GO:0016887: ATPase activity | 1.53E-03 |
| 31 | GO:0004467: long-chain fatty acid-CoA ligase activity | 1.73E-03 |
| 32 | GO:0015288: porin activity | 2.00E-03 |
| 33 | GO:0016209: antioxidant activity | 2.00E-03 |
| 34 | GO:0008308: voltage-gated anion channel activity | 2.28E-03 |
| 35 | GO:0008173: RNA methyltransferase activity | 2.28E-03 |
| 36 | GO:0004743: pyruvate kinase activity | 2.88E-03 |
| 37 | GO:0030955: potassium ion binding | 2.88E-03 |
| 38 | GO:0008047: enzyme activator activity | 3.20E-03 |
| 39 | GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity | 3.20E-03 |
| 40 | GO:0008131: primary amine oxidase activity | 4.59E-03 |
| 41 | GO:0005509: calcium ion binding | 4.85E-03 |
| 42 | GO:0031418: L-ascorbic acid binding | 5.75E-03 |
| 43 | GO:0036459: thiol-dependent ubiquitinyl hydrolase activity | 6.56E-03 |
| 44 | GO:0008565: protein transporter activity | 7.28E-03 |
| 45 | GO:0047134: protein-disulfide reductase activity | 8.32E-03 |
| 46 | GO:0000166: nucleotide binding | 9.19E-03 |
| 47 | GO:0004791: thioredoxin-disulfide reductase activity | 9.74E-03 |
| 48 | GO:0004843: thiol-dependent ubiquitin-specific protease activity | 1.07E-02 |
| 49 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 1.07E-02 |
| 50 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.18E-02 |
| 51 | GO:0008237: metallopeptidase activity | 1.28E-02 |
| 52 | GO:0016597: amino acid binding | 1.34E-02 |
| 53 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 1.51E-02 |
| 54 | GO:0005516: calmodulin binding | 1.54E-02 |
| 55 | GO:0102483: scopolin beta-glucosidase activity | 1.56E-02 |
| 56 | GO:0004683: calmodulin-dependent protein kinase activity | 1.56E-02 |
| 57 | GO:0016787: hydrolase activity | 1.73E-02 |
| 58 | GO:0005096: GTPase activator activity | 1.74E-02 |
| 59 | GO:0004222: metalloendopeptidase activity | 1.80E-02 |
| 60 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 1.86E-02 |
| 61 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 1.99E-02 |
| 62 | GO:0008422: beta-glucosidase activity | 2.12E-02 |
| 63 | GO:0005198: structural molecule activity | 2.59E-02 |
| 64 | GO:0051287: NAD binding | 2.73E-02 |
| 65 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.94E-02 |
| 66 | GO:0031625: ubiquitin protein ligase binding | 3.17E-02 |
| 67 | GO:0015035: protein disulfide oxidoreductase activity | 3.86E-02 |
| 68 | GO:0008026: ATP-dependent helicase activity | 3.94E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000502: proteasome complex | 4.74E-19 |
| 2 | GO:0005839: proteasome core complex | 1.54E-13 |
| 3 | GO:0019773: proteasome core complex, alpha-subunit complex | 5.25E-09 |
| 4 | GO:0031597: cytosolic proteasome complex | 2.48E-07 |
| 5 | GO:0031595: nuclear proteasome complex | 4.08E-07 |
| 6 | GO:0008540: proteasome regulatory particle, base subcomplex | 1.82E-06 |
| 7 | GO:0005829: cytosol | 5.35E-05 |
| 8 | GO:0016442: RISC complex | 1.08E-04 |
| 9 | GO:0008541: proteasome regulatory particle, lid subcomplex | 1.69E-04 |
| 10 | GO:0030176: integral component of endoplasmic reticulum membrane | 2.87E-04 |
| 11 | GO:0046861: glyoxysomal membrane | 4.19E-04 |
| 12 | GO:0005838: proteasome regulatory particle | 4.19E-04 |
| 13 | GO:0030117: membrane coat | 7.98E-04 |
| 14 | GO:0008250: oligosaccharyltransferase complex | 1.01E-03 |
| 15 | GO:0009514: glyoxysome | 2.28E-03 |
| 16 | GO:0046930: pore complex | 2.28E-03 |
| 17 | GO:0005773: vacuole | 2.50E-03 |
| 18 | GO:0010494: cytoplasmic stress granule | 2.57E-03 |
| 19 | GO:0030665: clathrin-coated vesicle membrane | 2.88E-03 |
| 20 | GO:0030125: clathrin vesicle coat | 3.20E-03 |
| 21 | GO:0048471: perinuclear region of cytoplasm | 3.53E-03 |
| 22 | GO:0005635: nuclear envelope | 3.67E-03 |
| 23 | GO:0005665: DNA-directed RNA polymerase II, core complex | 3.87E-03 |
| 24 | GO:0000419: DNA-directed RNA polymerase V complex | 5.35E-03 |
| 25 | GO:0005741: mitochondrial outer membrane | 6.56E-03 |
| 26 | GO:0005774: vacuolar membrane | 1.12E-02 |
| 27 | GO:0005783: endoplasmic reticulum | 1.33E-02 |
| 28 | GO:0000932: P-body | 1.39E-02 |
| 29 | GO:0009507: chloroplast | 1.40E-02 |
| 30 | GO:0005643: nuclear pore | 1.68E-02 |
| 31 | GO:0031201: SNARE complex | 2.25E-02 |
| 32 | GO:0031966: mitochondrial membrane | 2.80E-02 |
| 33 | GO:0009536: plastid | 2.90E-02 |
| 34 | GO:0005834: heterotrimeric G-protein complex | 3.47E-02 |
| 35 | GO:0005886: plasma membrane | 3.54E-02 |
| 36 | GO:0009706: chloroplast inner membrane | 3.78E-02 |
| 37 | GO:0022626: cytosolic ribosome | 4.05E-02 |
| 38 | GO:0005618: cell wall | 4.27E-02 |
| 39 | GO:0005777: peroxisome | 4.84E-02 |