co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G22060

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0032497: detection of lipopolysaccharide	0.00E+00
2	GO:0035264: multicellular organism growth	0.00E+00
3	GO:0070212: protein poly-ADP-ribosylation	0.00E+00
4	GO:0070588: calcium ion transmembrane transport	1.95E-07
5	GO:0010200: response to chitin	1.03E-05
6	GO:0046470: phosphatidylcholine metabolic process	7.02E-05
7	GO:0042742: defense response to bacterium	1.10E-04
8	GO:0006643: membrane lipid metabolic process	1.35E-04
9	GO:0080157: regulation of plant-type cell wall organization or biogenesis	1.35E-04
10	GO:0050691: regulation of defense response to virus by host	1.35E-04
11	GO:0015784: GDP-mannose transport	1.35E-04
12	GO:0051245: negative regulation of cellular defense response	1.35E-04
13	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	1.35E-04
14	GO:0010421: hydrogen peroxide-mediated programmed cell death	1.35E-04
15	GO:0006952: defense response	1.78E-04
16	GO:0043069: negative regulation of programmed cell death	2.00E-04
17	GO:0008219: cell death	2.04E-04
18	GO:0002221: pattern recognition receptor signaling pathway	3.11E-04
19	GO:0007166: cell surface receptor signaling pathway	3.17E-04
20	GO:0015783: GDP-fucose transport	5.13E-04
21	GO:0048281: inflorescence morphogenesis	5.13E-04
22	GO:0010581: regulation of starch biosynthetic process	5.13E-04
23	GO:0006979: response to oxidative stress	5.50E-04
24	GO:0009814: defense response, incompatible interaction	6.38E-04
25	GO:0033014: tetrapyrrole biosynthetic process	7.34E-04
26	GO:0010306: rhamnogalacturonan II biosynthetic process	7.34E-04
27	GO:0006612: protein targeting to membrane	7.34E-04
28	GO:0015696: ammonium transport	7.34E-04
29	GO:0000187: activation of MAPK activity	7.34E-04
30	GO:0046713: borate transport	7.34E-04
31	GO:0034219: carbohydrate transmembrane transport	7.34E-04
32	GO:0072334: UDP-galactose transmembrane transport	7.34E-04
33	GO:0009626: plant-type hypersensitive response	7.68E-04
34	GO:0010508: positive regulation of autophagy	9.73E-04
35	GO:2000038: regulation of stomatal complex development	9.73E-04
36	GO:0080142: regulation of salicylic acid biosynthetic process	9.73E-04
37	GO:0046345: abscisic acid catabolic process	9.73E-04
38	GO:0006085: acetyl-CoA biosynthetic process	9.73E-04
39	GO:0045088: regulation of innate immune response	9.73E-04
40	GO:0072488: ammonium transmembrane transport	9.73E-04
41	GO:0010363: regulation of plant-type hypersensitive response	9.73E-04
42	GO:0002229: defense response to oomycetes	1.15E-03
43	GO:0045487: gibberellin catabolic process	1.23E-03
44	GO:0010117: photoprotection	1.23E-03
45	GO:0010225: response to UV-C	1.23E-03
46	GO:0032957: inositol trisphosphate metabolic process	1.23E-03
47	GO:0050832: defense response to fungus	1.40E-03
48	GO:0006468: protein phosphorylation	1.43E-03
49	GO:0046855: inositol phosphate dephosphorylation	1.51E-03
50	GO:1900425: negative regulation of defense response to bacterium	1.51E-03
51	GO:0009816: defense response to bacterium, incompatible interaction	1.74E-03
52	GO:0098655: cation transmembrane transport	1.81E-03
53	GO:2000037: regulation of stomatal complex patterning	1.81E-03
54	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	1.81E-03
55	GO:0070370: cellular heat acclimation	2.12E-03
56	GO:0015937: coenzyme A biosynthetic process	2.12E-03
57	GO:0010044: response to aluminum ion	2.12E-03
58	GO:1900056: negative regulation of leaf senescence	2.12E-03
59	GO:0010120: camalexin biosynthetic process	2.81E-03
60	GO:0043562: cellular response to nitrogen levels	2.81E-03
61	GO:0090333: regulation of stomatal closure	3.17E-03
62	GO:0006783: heme biosynthetic process	3.17E-03
63	GO:0007064: mitotic sister chromatid cohesion	3.95E-03
64	GO:0009870: defense response signaling pathway, resistance gene-dependent	3.95E-03
65	GO:0006032: chitin catabolic process	3.95E-03
66	GO:0080167: response to karrikin	4.01E-03
67	GO:0031347: regulation of defense response	4.19E-03
68	GO:0015770: sucrose transport	4.36E-03
69	GO:0000272: polysaccharide catabolic process	4.36E-03
70	GO:0030148: sphingolipid biosynthetic process	4.36E-03
71	GO:0046856: phosphatidylinositol dephosphorylation	4.36E-03
72	GO:0046777: protein autophosphorylation	4.37E-03
73	GO:0012501: programmed cell death	4.79E-03
74	GO:0010229: inflorescence development	5.22E-03
75	GO:0055046: microgametogenesis	5.22E-03
76	GO:0007034: vacuolar transport	5.68E-03
77	GO:0034605: cellular response to heat	5.68E-03
78	GO:0002237: response to molecule of bacterial origin	5.68E-03
79	GO:0090351: seedling development	6.14E-03
80	GO:0010053: root epidermal cell differentiation	6.14E-03
81	GO:0009969: xyloglucan biosynthetic process	6.14E-03
82	GO:0042343: indole glucosinolate metabolic process	6.14E-03
83	GO:0005985: sucrose metabolic process	6.14E-03
84	GO:0016042: lipid catabolic process	6.34E-03
85	GO:0006071: glycerol metabolic process	6.62E-03
86	GO:0009624: response to nematode	6.62E-03
87	GO:0009863: salicylic acid mediated signaling pathway	7.11E-03
88	GO:0031408: oxylipin biosynthetic process	8.14E-03
89	GO:0016998: cell wall macromolecule catabolic process	8.14E-03
90	GO:0015992: proton transport	8.14E-03
91	GO:0051260: protein homooligomerization	8.14E-03
92	GO:0098542: defense response to other organism	8.14E-03
93	GO:0048278: vesicle docking	8.14E-03
94	GO:0071456: cellular response to hypoxia	8.67E-03
95	GO:0001944: vasculature development	9.21E-03
96	GO:0010227: floral organ abscission	9.21E-03
97	GO:0071215: cellular response to abscisic acid stimulus	9.21E-03
98	GO:0009686: gibberellin biosynthetic process	9.21E-03
99	GO:0000271: polysaccharide biosynthetic process	1.09E-02
100	GO:0042631: cellular response to water deprivation	1.09E-02
101	GO:0045489: pectin biosynthetic process	1.15E-02
102	GO:0048544: recognition of pollen	1.21E-02
103	GO:0061025: membrane fusion	1.21E-02
104	GO:0010193: response to ozone	1.34E-02
105	GO:0009409: response to cold	1.39E-02
106	GO:0009639: response to red or far red light	1.53E-02
107	GO:0016567: protein ubiquitination	1.54E-02
108	GO:0051607: defense response to virus	1.66E-02
109	GO:0001666: response to hypoxia	1.73E-02
110	GO:0009607: response to biotic stimulus	1.80E-02
111	GO:0009651: response to salt stress	1.82E-02
112	GO:0006906: vesicle fusion	1.88E-02
113	GO:0006970: response to osmotic stress	1.92E-02
114	GO:0048573: photoperiodism, flowering	1.95E-02
115	GO:0015995: chlorophyll biosynthetic process	1.95E-02
116	GO:0016049: cell growth	2.02E-02
117	GO:0009817: defense response to fungus, incompatible interaction	2.09E-02
118	GO:0009832: plant-type cell wall biogenesis	2.17E-02
119	GO:0009867: jasmonic acid mediated signaling pathway	2.48E-02
120	GO:0045087: innate immune response	2.48E-02
121	GO:0016051: carbohydrate biosynthetic process	2.48E-02
122	GO:0007165: signal transduction	2.64E-02
123	GO:0045892: negative regulation of transcription, DNA-templated	2.68E-02
124	GO:0009737: response to abscisic acid	2.73E-02
125	GO:0006887: exocytosis	2.80E-02
126	GO:0042542: response to hydrogen peroxide	2.88E-02
127	GO:0042546: cell wall biogenesis	3.05E-02
128	GO:0009644: response to high light intensity	3.14E-02
129	GO:0008643: carbohydrate transport	3.14E-02
130	GO:0009751: response to salicylic acid	3.21E-02
131	GO:0006629: lipid metabolic process	3.26E-02
132	GO:0016310: phosphorylation	3.36E-02
133	GO:0000165: MAPK cascade	3.40E-02
134	GO:0009846: pollen germination	3.49E-02
135	GO:0006813: potassium ion transport	3.67E-02
136	GO:0006486: protein glycosylation	3.67E-02
137	GO:0010224: response to UV-B	3.76E-02
138	GO:0048367: shoot system development	4.23E-02
139	GO:0018105: peptidyl-serine phosphorylation	4.81E-02
140	GO:0009742: brassinosteroid mediated signaling pathway	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0005458: GDP-mannose transmembrane transporter activity	0.00E+00
2	GO:0005388: calcium-transporting ATPase activity	1.10E-07
3	GO:0016301: kinase activity	6.98E-05
4	GO:0005524: ATP binding	1.01E-04
5	GO:0004630: phospholipase D activity	1.14E-04
6	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	1.14E-04
7	GO:0004325: ferrochelatase activity	1.35E-04
8	GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity	1.35E-04
9	GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity	1.35E-04
10	GO:0031127: alpha-(1,2)-fucosyltransferase activity	1.35E-04
11	GO:0046027: phospholipid:diacylglycerol acyltransferase activity	1.35E-04
12	GO:0015085: calcium ion transmembrane transporter activity	1.35E-04
13	GO:0080042: ADP-glucose pyrophosphohydrolase activity	1.35E-04
14	GO:0005516: calmodulin binding	2.93E-04
15	GO:0045140: inositol phosphoceramide synthase activity	3.11E-04
16	GO:0080041: ADP-ribose pyrophosphohydrolase activity	3.11E-04
17	GO:0004594: pantothenate kinase activity	3.11E-04
18	GO:0017110: nucleoside-diphosphatase activity	3.11E-04
19	GO:0052659: inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity	5.13E-04
20	GO:0005457: GDP-fucose transmembrane transporter activity	5.13E-04
21	GO:0043531: ADP binding	5.87E-04
22	GO:0052658: inositol-1,4,5-trisphosphate 5-phosphatase activity	7.34E-04
23	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	7.34E-04
24	GO:0004445: inositol-polyphosphate 5-phosphatase activity	7.34E-04
25	GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity	9.73E-04
26	GO:0047631: ADP-ribose diphosphatase activity	1.23E-03
27	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	1.23E-03
28	GO:0010294: abscisic acid glucosyltransferase activity	1.23E-03
29	GO:0008374: O-acyltransferase activity	1.23E-03
30	GO:0005459: UDP-galactose transmembrane transporter activity	1.23E-03
31	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	1.23E-03
32	GO:0004674: protein serine/threonine kinase activity	1.38E-03
33	GO:0000210: NAD+ diphosphatase activity	1.51E-03
34	GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity	1.51E-03
35	GO:0035252: UDP-xylosyltransferase activity	1.51E-03
36	GO:0008519: ammonium transmembrane transporter activity	1.51E-03
37	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.61E-03
38	GO:0004620: phospholipase activity	2.12E-03
39	GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity	2.12E-03
40	GO:0008506: sucrose:proton symporter activity	2.12E-03
41	GO:0005338: nucleotide-sugar transmembrane transporter activity	2.12E-03
42	GO:0004708: MAP kinase kinase activity	2.46E-03
43	GO:0004714: transmembrane receptor protein tyrosine kinase activity	2.46E-03
44	GO:0008417: fucosyltransferase activity	3.17E-03
45	GO:0004568: chitinase activity	3.95E-03
46	GO:0004713: protein tyrosine kinase activity	3.95E-03
47	GO:0004672: protein kinase activity	4.35E-03
48	GO:0008559: xenobiotic-transporting ATPase activity	4.36E-03
49	GO:0047372: acylglycerol lipase activity	4.36E-03
50	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	4.79E-03
51	GO:0008234: cysteine-type peptidase activity	5.15E-03
52	GO:0005262: calcium channel activity	5.22E-03
53	GO:0008061: chitin binding	6.14E-03
54	GO:0005509: calcium ion binding	7.79E-03
55	GO:0033612: receptor serine/threonine kinase binding	8.14E-03
56	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	8.67E-03
57	GO:0005249: voltage-gated potassium channel activity	1.09E-02
58	GO:0010181: FMN binding	1.21E-02
59	GO:0004197: cysteine-type endopeptidase activity	1.40E-02
60	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.60E-02
61	GO:0016757: transferase activity, transferring glycosyl groups	1.86E-02
62	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.88E-02
63	GO:0030247: polysaccharide binding	1.95E-02
64	GO:0004683: calmodulin-dependent protein kinase activity	1.95E-02
65	GO:0030246: carbohydrate binding	1.99E-02
66	GO:0000149: SNARE binding	2.64E-02
67	GO:0004712: protein serine/threonine/tyrosine kinase activity	2.64E-02
68	GO:0005484: SNAP receptor activity	2.97E-02
69	GO:0051287: NAD binding	3.40E-02
70	GO:0016298: lipase activity	3.76E-02
71	GO:0031625: ubiquitin protein ligase binding	3.95E-02
72	GO:0045735: nutrient reservoir activity	4.13E-02
73	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	4.23E-02
74	GO:0080043: quercetin 3-O-glucosyltransferase activity	4.42E-02
75	GO:0080044: quercetin 7-O-glucosyltransferase activity	4.42E-02
76	GO:0015035: protein disulfide oxidoreductase activity	4.81E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	9.83E-06
2	GO:0005887: integral component of plasma membrane	4.01E-04
3	GO:0008076: voltage-gated potassium channel complex	7.34E-04
4	GO:0030173: integral component of Golgi membrane	1.81E-03
5	GO:0016021: integral component of membrane	3.79E-03
6	GO:0016602: CCAAT-binding factor complex	5.22E-03
7	GO:0030176: integral component of endoplasmic reticulum membrane	6.14E-03
8	GO:0043234: protein complex	6.62E-03
9	GO:0043231: intracellular membrane-bounded organelle	7.45E-03
10	GO:0032580: Golgi cisterna membrane	1.53E-02
11	GO:0000325: plant-type vacuole	2.32E-02
12	GO:0031201: SNARE complex	2.80E-02
13	GO:0010008: endosome membrane	4.23E-02
14	GO:0012505: endomembrane system	4.62E-02
15	GO:0009706: chloroplast inner membrane	4.71E-02
16	GO:0000139: Golgi membrane	4.80E-02