co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G21780

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0002764: immune response-regulating signaling pathway	0.00E+00
2	GO:0032497: detection of lipopolysaccharide	0.00E+00
3	GO:0035264: multicellular organism growth	0.00E+00
4	GO:0033198: response to ATP	0.00E+00
5	GO:0070212: protein poly-ADP-ribosylation	0.00E+00
6	GO:0010200: response to chitin	1.25E-10
7	GO:0009697: salicylic acid biosynthetic process	1.23E-06
8	GO:0002237: response to molecule of bacterial origin	2.51E-06
9	GO:0009626: plant-type hypersensitive response	7.99E-06
10	GO:0006952: defense response	1.44E-05
11	GO:0000187: activation of MAPK activity	3.86E-05
12	GO:0042742: defense response to bacterium	4.19E-05
13	GO:0080142: regulation of salicylic acid biosynthetic process	6.89E-05
14	GO:0045088: regulation of innate immune response	6.89E-05
15	GO:0070588: calcium ion transmembrane transport	9.72E-05
16	GO:2000037: regulation of stomatal complex patterning	2.12E-04
17	GO:0046777: protein autophosphorylation	2.76E-04
18	GO:1900056: negative regulation of leaf senescence	2.76E-04
19	GO:0051180: vitamin transport	3.29E-04
20	GO:0007229: integrin-mediated signaling pathway	3.29E-04
21	GO:0010045: response to nickel cation	3.29E-04
22	GO:0030974: thiamine pyrophosphate transport	3.29E-04
23	GO:0080157: regulation of plant-type cell wall organization or biogenesis	3.29E-04
24	GO:0050691: regulation of defense response to virus by host	3.29E-04
25	GO:1902065: response to L-glutamate	3.29E-04
26	GO:0015784: GDP-mannose transport	3.29E-04
27	GO:0048482: plant ovule morphogenesis	3.29E-04
28	GO:0010365: positive regulation of ethylene biosynthetic process	3.29E-04
29	GO:0051938: L-glutamate import	3.29E-04
30	GO:0051245: negative regulation of cellular defense response	3.29E-04
31	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	3.29E-04
32	GO:0010941: regulation of cell death	3.29E-04
33	GO:0010421: hydrogen peroxide-mediated programmed cell death	3.29E-04
34	GO:0050832: defense response to fungus	4.65E-04
35	GO:0051865: protein autoubiquitination	5.12E-04
36	GO:0006468: protein phosphorylation	6.08E-04
37	GO:0007064: mitotic sister chromatid cohesion	7.06E-04
38	GO:0043069: negative regulation of programmed cell death	7.06E-04
39	GO:0015893: drug transport	7.18E-04
40	GO:0010042: response to manganese ion	7.18E-04
41	GO:0002221: pattern recognition receptor signaling pathway	7.18E-04
42	GO:0043091: L-arginine import	7.18E-04
43	GO:0046939: nucleotide phosphorylation	7.18E-04
44	GO:0015802: basic amino acid transport	7.18E-04
45	GO:0008219: cell death	1.04E-03
46	GO:0010229: inflorescence development	1.05E-03
47	GO:0010581: regulation of starch biosynthetic process	1.16E-03
48	GO:0002230: positive regulation of defense response to virus by host	1.16E-03
49	GO:0016045: detection of bacterium	1.16E-03
50	GO:0009062: fatty acid catabolic process	1.16E-03
51	GO:1900140: regulation of seedling development	1.16E-03
52	GO:0010359: regulation of anion channel activity	1.16E-03
53	GO:0051176: positive regulation of sulfur metabolic process	1.16E-03
54	GO:0046621: negative regulation of organ growth	1.16E-03
55	GO:0015783: GDP-fucose transport	1.16E-03
56	GO:0048281: inflorescence morphogenesis	1.16E-03
57	GO:0034605: cellular response to heat	1.18E-03
58	GO:0045087: innate immune response	1.39E-03
59	GO:0010306: rhamnogalacturonan II biosynthetic process	1.67E-03
60	GO:0006612: protein targeting to membrane	1.67E-03
61	GO:0002679: respiratory burst involved in defense response	1.67E-03
62	GO:0015696: ammonium transport	1.67E-03
63	GO:0046836: glycolipid transport	1.67E-03
64	GO:0046713: borate transport	1.67E-03
65	GO:0072334: UDP-galactose transmembrane transport	1.67E-03
66	GO:0009611: response to wounding	1.77E-03
67	GO:0009814: defense response, incompatible interaction	2.16E-03
68	GO:0031348: negative regulation of defense response	2.16E-03
69	GO:0071456: cellular response to hypoxia	2.16E-03
70	GO:0007166: cell surface receptor signaling pathway	2.20E-03
71	GO:0010508: positive regulation of autophagy	2.24E-03
72	GO:2000038: regulation of stomatal complex development	2.24E-03
73	GO:0060548: negative regulation of cell death	2.24E-03
74	GO:0072488: ammonium transmembrane transport	2.24E-03
75	GO:0010363: regulation of plant-type hypersensitive response	2.24E-03
76	GO:0022622: root system development	2.24E-03
77	GO:0009617: response to bacterium	2.35E-03
78	GO:0010227: floral organ abscission	2.36E-03
79	GO:0000165: MAPK cascade	2.45E-03
80	GO:0045487: gibberellin catabolic process	2.87E-03
81	GO:0010117: photoprotection	2.87E-03
82	GO:0010225: response to UV-C	2.87E-03
83	GO:0032957: inositol trisphosphate metabolic process	2.87E-03
84	GO:0018258: protein O-linked glycosylation via hydroxyproline	3.54E-03
85	GO:0046855: inositol phosphate dephosphorylation	3.54E-03
86	GO:1900425: negative regulation of defense response to bacterium	3.54E-03
87	GO:0010405: arabinogalactan protein metabolic process	3.54E-03
88	GO:0048317: seed morphogenesis	3.54E-03
89	GO:0007165: signal transduction	3.88E-03
90	GO:0002229: defense response to oomycetes	3.98E-03
91	GO:0006891: intra-Golgi vesicle-mediated transport	3.98E-03
92	GO:0009409: response to cold	4.20E-03
93	GO:0042372: phylloquinone biosynthetic process	4.26E-03
94	GO:0016032: viral process	4.26E-03
95	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	4.26E-03
96	GO:0009742: brassinosteroid mediated signaling pathway	4.74E-03
97	GO:0080167: response to karrikin	4.85E-03
98	GO:0070370: cellular heat acclimation	5.03E-03
99	GO:0010038: response to metal ion	5.03E-03
100	GO:0010161: red light signaling pathway	5.03E-03
101	GO:0046470: phosphatidylcholine metabolic process	5.03E-03
102	GO:0051607: defense response to virus	5.44E-03
103	GO:0032875: regulation of DNA endoreduplication	5.85E-03
104	GO:0045892: negative regulation of transcription, DNA-templated	6.54E-03
105	GO:0048193: Golgi vesicle transport	6.71E-03
106	GO:0010204: defense response signaling pathway, resistance gene-independent	6.71E-03
107	GO:0010099: regulation of photomorphogenesis	6.71E-03
108	GO:0090333: regulation of stomatal closure	7.60E-03
109	GO:0010112: regulation of systemic acquired resistance	7.60E-03
110	GO:0009060: aerobic respiration	7.60E-03
111	GO:0009051: pentose-phosphate shunt, oxidative branch	7.60E-03
112	GO:0048354: mucilage biosynthetic process involved in seed coat development	8.55E-03
113	GO:0010449: root meristem growth	8.55E-03
114	GO:0009751: response to salicylic acid	8.59E-03
115	GO:0009870: defense response signaling pathway, resistance gene-dependent	9.53E-03
116	GO:0006032: chitin catabolic process	9.53E-03
117	GO:0000272: polysaccharide catabolic process	1.06E-02
118	GO:0046856: phosphatidylinositol dephosphorylation	1.06E-02
119	GO:0010468: regulation of gene expression	1.11E-02
120	GO:0006887: exocytosis	1.14E-02
121	GO:0015706: nitrate transport	1.16E-02
122	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	1.16E-02
123	GO:0008361: regulation of cell size	1.16E-02
124	GO:0012501: programmed cell death	1.16E-02
125	GO:0009785: blue light signaling pathway	1.27E-02
126	GO:0006006: glucose metabolic process	1.27E-02
127	GO:0055046: microgametogenesis	1.27E-02
128	GO:0007034: vacuolar transport	1.38E-02
129	GO:0006855: drug transmembrane transport	1.44E-02
130	GO:0010167: response to nitrate	1.50E-02
131	GO:0090351: seedling development	1.50E-02
132	GO:0046854: phosphatidylinositol phosphorylation	1.50E-02
133	GO:0010053: root epidermal cell differentiation	1.50E-02
134	GO:0009969: xyloglucan biosynthetic process	1.50E-02
135	GO:0042343: indole glucosinolate metabolic process	1.50E-02
136	GO:0031347: regulation of defense response	1.50E-02
137	GO:0006486: protein glycosylation	1.67E-02
138	GO:0009863: salicylic acid mediated signaling pathway	1.75E-02
139	GO:0009909: regulation of flower development	1.85E-02
140	GO:0009695: jasmonic acid biosynthetic process	1.87E-02
141	GO:0048278: vesicle docking	2.00E-02
142	GO:0031408: oxylipin biosynthetic process	2.00E-02
143	GO:0003333: amino acid transmembrane transport	2.00E-02
144	GO:0016998: cell wall macromolecule catabolic process	2.00E-02
145	GO:0051260: protein homooligomerization	2.00E-02
146	GO:0098542: defense response to other organism	2.00E-02
147	GO:0016226: iron-sulfur cluster assembly	2.14E-02
148	GO:0010017: red or far-red light signaling pathway	2.14E-02
149	GO:0009620: response to fungus	2.17E-02
150	GO:0009686: gibberellin biosynthetic process	2.27E-02
151	GO:0009624: response to nematode	2.38E-02
152	GO:0042147: retrograde transport, endosome to Golgi	2.55E-02
153	GO:0070417: cellular response to cold	2.55E-02
154	GO:0042391: regulation of membrane potential	2.70E-02
155	GO:0000271: polysaccharide biosynthetic process	2.70E-02
156	GO:0010118: stomatal movement	2.70E-02
157	GO:0045489: pectin biosynthetic process	2.85E-02
158	GO:0071472: cellular response to salt stress	2.85E-02
159	GO:0009651: response to salt stress	2.86E-02
160	GO:0009737: response to abscisic acid	2.90E-02
161	GO:0048544: recognition of pollen	3.00E-02
162	GO:0061025: membrane fusion	3.00E-02
163	GO:0010193: response to ozone	3.31E-02
164	GO:0006635: fatty acid beta-oxidation	3.31E-02
165	GO:0030163: protein catabolic process	3.63E-02
166	GO:0009639: response to red or far red light	3.79E-02
167	GO:0006904: vesicle docking involved in exocytosis	3.96E-02
168	GO:0010150: leaf senescence	4.10E-02
169	GO:0000910: cytokinesis	4.13E-02
170	GO:0009911: positive regulation of flower development	4.30E-02
171	GO:0001666: response to hypoxia	4.30E-02
172	GO:0009615: response to virus	4.30E-02
173	GO:0009816: defense response to bacterium, incompatible interaction	4.47E-02
174	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	4.47E-02
175	GO:0006906: vesicle fusion	4.65E-02
176	GO:0009627: systemic acquired resistance	4.65E-02
177	GO:0042128: nitrate assimilation	4.65E-02
178	GO:0048573: photoperiodism, flowering	4.82E-02

Rank	GO Term	Adjusted P value
1	GO:0005458: GDP-mannose transmembrane transporter activity	0.00E+00
2	GO:0016301: kinase activity	1.79E-06
3	GO:0043531: ADP binding	2.58E-05
4	GO:0005388: calcium-transporting ATPase activity	6.73E-05
5	GO:0004674: protein serine/threonine kinase activity	1.05E-04
6	GO:0005509: calcium ion binding	1.47E-04
7	GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity	3.29E-04
8	GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity	3.29E-04
9	GO:0008909: isochorismate synthase activity	3.29E-04
10	GO:0031127: alpha-(1,2)-fucosyltransferase activity	3.29E-04
11	GO:0008809: carnitine racemase activity	3.29E-04
12	GO:0090422: thiamine pyrophosphate transporter activity	3.29E-04
13	GO:0015085: calcium ion transmembrane transporter activity	3.29E-04
14	GO:0080042: ADP-glucose pyrophosphohydrolase activity	3.29E-04
15	GO:0004708: MAP kinase kinase activity	3.48E-04
16	GO:0004714: transmembrane receptor protein tyrosine kinase activity	3.48E-04
17	GO:0080041: ADP-ribose pyrophosphohydrolase activity	7.18E-04
18	GO:0017110: nucleoside-diphosphatase activity	7.18E-04
19	GO:0005524: ATP binding	8.89E-04
20	GO:0052659: inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity	1.16E-03
21	GO:0046423: allene-oxide cyclase activity	1.16E-03
22	GO:0016595: glutamate binding	1.16E-03
23	GO:0005457: GDP-fucose transmembrane transporter activity	1.16E-03
24	GO:0016174: NAD(P)H oxidase activity	1.16E-03
25	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.61E-03
26	GO:0004445: inositol-polyphosphate 5-phosphatase activity	1.67E-03
27	GO:0015181: arginine transmembrane transporter activity	1.67E-03
28	GO:0004165: dodecenoyl-CoA delta-isomerase activity	1.67E-03
29	GO:0052658: inositol-1,4,5-trisphosphate 5-phosphatase activity	1.67E-03
30	GO:0015189: L-lysine transmembrane transporter activity	1.67E-03
31	GO:0017089: glycolipid transporter activity	1.67E-03
32	GO:0019201: nucleotide kinase activity	1.67E-03
33	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	1.67E-03
34	GO:0043424: protein histidine kinase binding	1.80E-03
35	GO:0033612: receptor serine/threonine kinase binding	1.97E-03
36	GO:0005313: L-glutamate transmembrane transporter activity	2.24E-03
37	GO:0019199: transmembrane receptor protein kinase activity	2.24E-03
38	GO:0004345: glucose-6-phosphate dehydrogenase activity	2.24E-03
39	GO:0051861: glycolipid binding	2.24E-03
40	GO:0047631: ADP-ribose diphosphatase activity	2.87E-03
41	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	2.87E-03
42	GO:0005459: UDP-galactose transmembrane transporter activity	2.87E-03
43	GO:0005249: voltage-gated potassium channel activity	3.00E-03
44	GO:0008234: cysteine-type peptidase activity	3.20E-03
45	GO:0000210: NAD+ diphosphatase activity	3.54E-03
46	GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity	3.54E-03
47	GO:0035252: UDP-xylosyltransferase activity	3.54E-03
48	GO:0008519: ammonium transmembrane transporter activity	3.54E-03
49	GO:1990714: hydroxyproline O-galactosyltransferase activity	3.54E-03
50	GO:0004709: MAP kinase kinase kinase activity	3.54E-03
51	GO:0004017: adenylate kinase activity	4.26E-03
52	GO:0019900: kinase binding	4.26E-03
53	GO:0004672: protein kinase activity	5.01E-03
54	GO:0004620: phospholipase activity	5.03E-03
55	GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity	5.03E-03
56	GO:0005338: nucleotide-sugar transmembrane transporter activity	5.03E-03
57	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	5.13E-03
58	GO:0052747: sinapyl alcohol dehydrogenase activity	5.85E-03
59	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	6.71E-03
60	GO:0004430: 1-phosphatidylinositol 4-kinase activity	6.71E-03
61	GO:0004630: phospholipase D activity	6.71E-03
62	GO:0008417: fucosyltransferase activity	7.60E-03
63	GO:0015238: drug transmembrane transporter activity	7.91E-03
64	GO:0015174: basic amino acid transmembrane transporter activity	8.55E-03
65	GO:0015112: nitrate transmembrane transporter activity	8.55E-03
66	GO:0004713: protein tyrosine kinase activity	9.53E-03
67	GO:0004568: chitinase activity	9.53E-03
68	GO:0008047: enzyme activator activity	9.53E-03
69	GO:0008559: xenobiotic-transporting ATPase activity	1.06E-02
70	GO:0047372: acylglycerol lipase activity	1.06E-02
71	GO:0045551: cinnamyl-alcohol dehydrogenase activity	1.16E-02
72	GO:0008378: galactosyltransferase activity	1.16E-02
73	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	1.16E-02
74	GO:0005516: calmodulin binding	1.24E-02
75	GO:0043565: sequence-specific DNA binding	1.34E-02
76	GO:0008061: chitin binding	1.50E-02
77	GO:0004190: aspartic-type endopeptidase activity	1.50E-02
78	GO:0030552: cAMP binding	1.50E-02
79	GO:0030553: cGMP binding	1.50E-02
80	GO:0043130: ubiquitin binding	1.75E-02
81	GO:0005216: ion channel activity	1.87E-02
82	GO:0004707: MAP kinase activity	2.00E-02
83	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	2.04E-02
84	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	2.14E-02
85	GO:0030551: cyclic nucleotide binding	2.70E-02
86	GO:0003713: transcription coactivator activity	2.85E-02
87	GO:0016758: transferase activity, transferring hexosyl groups	2.90E-02
88	GO:0010181: FMN binding	3.00E-02
89	GO:0005515: protein binding	3.04E-02
90	GO:0008270: zinc ion binding	3.05E-02
91	GO:0003924: GTPase activity	3.30E-02
92	GO:0004197: cysteine-type endopeptidase activity	3.47E-02
93	GO:0004842: ubiquitin-protein transferase activity	3.53E-02
94	GO:0015297: antiporter activity	3.92E-02
95	GO:0008375: acetylglucosaminyltransferase activity	4.65E-02
96	GO:0004806: triglyceride lipase activity	4.82E-02
97	GO:0004721: phosphoprotein phosphatase activity	4.82E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	6.27E-06
2	GO:0005901: caveola	7.18E-04
3	GO:0016021: integral component of membrane	1.30E-03
4	GO:0008076: voltage-gated potassium channel complex	1.67E-03
5	GO:0005887: integral component of plasma membrane	3.80E-03
6	GO:0012505: endomembrane system	4.24E-03
7	GO:0030173: integral component of Golgi membrane	4.26E-03
8	GO:0090404: pollen tube tip	1.06E-02
9	GO:0030176: integral component of endoplasmic reticulum membrane	1.50E-02
10	GO:0005795: Golgi stack	1.50E-02
11	GO:0043234: protein complex	1.62E-02
12	GO:0010008: endosome membrane	2.04E-02
13	GO:0009504: cell plate	3.15E-02
14	GO:0000139: Golgi membrane	3.41E-02
15	GO:0000145: exocyst	3.47E-02
16	GO:0032580: Golgi cisterna membrane	3.79E-02
17	GO:0005768: endosome	4.98E-02