Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G21260

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0071000: response to magnetism0.00E+00
2GO:1905177: tracheary element differentiation0.00E+00
3GO:0009583: detection of light stimulus0.00E+00
4GO:0007037: vacuolar phosphate transport0.00E+00
5GO:0051503: adenine nucleotide transport0.00E+00
6GO:0072387: flavin adenine dinucleotide metabolic process7.90E-05
7GO:0051247: positive regulation of protein metabolic process7.90E-05
8GO:0000066: mitochondrial ornithine transport7.90E-05
9GO:2000905: negative regulation of starch metabolic process7.90E-05
10GO:0015969: guanosine tetraphosphate metabolic process7.90E-05
11GO:1905011: transmembrane phosphate ion transport from cytosol to vacuole1.89E-04
12GO:1900871: chloroplast mRNA modification1.89E-04
13GO:0010617: circadian regulation of calcium ion oscillation1.89E-04
14GO:0099402: plant organ development1.89E-04
15GO:0010343: singlet oxygen-mediated programmed cell death1.89E-04
16GO:1901529: positive regulation of anion channel activity1.89E-04
17GO:0048586: regulation of long-day photoperiodism, flowering3.17E-04
18GO:0010623: programmed cell death involved in cell development3.17E-04
19GO:1902448: positive regulation of shade avoidance3.17E-04
20GO:1901672: positive regulation of systemic acquired resistance3.17E-04
21GO:1901332: negative regulation of lateral root development4.58E-04
22GO:0046902: regulation of mitochondrial membrane permeability4.58E-04
23GO:1902347: response to strigolactone6.09E-04
24GO:0048442: sepal development6.09E-04
25GO:2000306: positive regulation of photomorphogenesis6.09E-04
26GO:0010508: positive regulation of autophagy6.09E-04
27GO:0080110: sporopollenin biosynthetic process7.72E-04
28GO:0010117: photoprotection7.72E-04
29GO:0046283: anthocyanin-containing compound metabolic process7.72E-04
30GO:0045038: protein import into chloroplast thylakoid membrane7.72E-04
31GO:0010029: regulation of seed germination8.67E-04
32GO:0060918: auxin transport9.42E-04
33GO:0010190: cytochrome b6f complex assembly9.42E-04
34GO:1901371: regulation of leaf morphogenesis9.42E-04
35GO:0010076: maintenance of floral meristem identity1.12E-03
36GO:0009854: oxidative photosynthetic carbon pathway1.12E-03
37GO:0010310: regulation of hydrogen peroxide metabolic process1.12E-03
38GO:0010244: response to low fluence blue light stimulus by blue low-fluence system1.12E-03
39GO:0051510: regulation of unidimensional cell growth1.31E-03
40GO:0006839: mitochondrial transport1.50E-03
41GO:0009644: response to high light intensity1.83E-03
42GO:0010206: photosystem II repair1.95E-03
43GO:0006098: pentose-phosphate shunt1.95E-03
44GO:1900426: positive regulation of defense response to bacterium2.18E-03
45GO:0009638: phototropism2.18E-03
46GO:0010018: far-red light signaling pathway2.18E-03
47GO:1900865: chloroplast RNA modification2.18E-03
48GO:0048441: petal development2.41E-03
49GO:0010075: regulation of meristem growth3.18E-03
50GO:0006094: gluconeogenesis3.18E-03
51GO:0009785: blue light signaling pathway3.18E-03
52GO:0048440: carpel development3.45E-03
53GO:0042753: positive regulation of circadian rhythm4.02E-03
54GO:2000377: regulation of reactive oxygen species metabolic process4.31E-03
55GO:0010089: xylem development5.89E-03
56GO:0010584: pollen exine formation5.89E-03
57GO:0048443: stamen development5.89E-03
58GO:0019722: calcium-mediated signaling5.89E-03
59GO:0009789: positive regulation of abscisic acid-activated signaling pathway6.22E-03
60GO:0010118: stomatal movement6.57E-03
61GO:0010268: brassinosteroid homeostasis6.92E-03
62GO:0045489: pectin biosynthetic process6.92E-03
63GO:0042752: regulation of circadian rhythm7.28E-03
64GO:0009646: response to absence of light7.28E-03
65GO:0055085: transmembrane transport7.29E-03
66GO:0016132: brassinosteroid biosynthetic process8.01E-03
67GO:0010583: response to cyclopentenone8.39E-03
68GO:0009639: response to red or far red light9.16E-03
69GO:0006464: cellular protein modification process9.16E-03
70GO:0016125: sterol metabolic process9.16E-03
71GO:0007267: cell-cell signaling9.56E-03
72GO:0001666: response to hypoxia1.04E-02
73GO:0018298: protein-chromophore linkage1.25E-02
74GO:0010218: response to far red light1.34E-02
75GO:0009637: response to blue light1.48E-02
76GO:0009853: photorespiration1.48E-02
77GO:0010114: response to red light1.77E-02
78GO:0009640: photomorphogenesis1.77E-02
79GO:0042546: cell wall biogenesis1.82E-02
80GO:0000165: MAPK cascade2.02E-02
81GO:0006364: rRNA processing2.19E-02
82GO:0009585: red, far-red light phototransduction2.19E-02
83GO:0006096: glycolytic process2.46E-02
84GO:0048367: shoot system development2.52E-02
85GO:0048316: seed development2.52E-02
86GO:0009740: gibberellic acid mediated signaling pathway2.69E-02
87GO:0009738: abscisic acid-activated signaling pathway2.70E-02
88GO:0009416: response to light stimulus2.79E-02
89GO:0006413: translational initiation3.94E-02
90GO:0016310: phosphorylation4.06E-02
91GO:0007623: circadian rhythm4.14E-02
92GO:0009739: response to gibberellin4.49E-02
93GO:0007166: cell surface receptor signaling pathway4.56E-02
94GO:0010468: regulation of gene expression4.70E-02
RankGO TermAdjusted P value
1GO:0016618: hydroxypyruvate reductase activity7.90E-05
2GO:0005290: L-histidine transmembrane transporter activity7.90E-05
3GO:0008728: GTP diphosphokinase activity1.89E-04
4GO:0017118: lipoyltransferase activity1.89E-04
5GO:0000064: L-ornithine transmembrane transporter activity1.89E-04
6GO:0048531: beta-1,3-galactosyltransferase activity1.89E-04
7GO:0030267: glyoxylate reductase (NADP) activity3.17E-04
8GO:0009882: blue light photoreceptor activity4.58E-04
9GO:0015189: L-lysine transmembrane transporter activity4.58E-04
10GO:0015181: arginine transmembrane transporter activity4.58E-04
11GO:0052793: pectin acetylesterase activity6.09E-04
12GO:0005471: ATP:ADP antiporter activity7.72E-04
13GO:0004462: lactoylglutathione lyase activity9.42E-04
14GO:0008200: ion channel inhibitor activity9.42E-04
15GO:0004332: fructose-bisphosphate aldolase activity9.42E-04
16GO:0043022: ribosome binding1.51E-03
17GO:0071949: FAD binding1.95E-03
18GO:0008081: phosphoric diester hydrolase activity3.18E-03
19GO:0042973: glucan endo-1,3-beta-D-glucosidase activity3.45E-03
20GO:0004675: transmembrane receptor protein serine/threonine kinase activity5.15E-03
21GO:0008080: N-acetyltransferase activity6.92E-03
22GO:0042802: identical protein binding7.02E-03
23GO:0050662: coenzyme binding7.28E-03
24GO:0019901: protein kinase binding7.64E-03
25GO:0004518: nuclease activity8.39E-03
26GO:0008236: serine-type peptidase activity1.21E-02
27GO:0004871: signal transducer activity1.33E-02
28GO:0004222: metalloendopeptidase activity1.34E-02
29GO:0016491: oxidoreductase activity1.87E-02
30GO:0005198: structural molecule activity1.92E-02
31GO:0051287: NAD binding2.02E-02
32GO:0004672: protein kinase activity2.15E-02
33GO:0003690: double-stranded DNA binding2.24E-02
34GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups2.52E-02
35GO:0016746: transferase activity, transferring acyl groups2.87E-02
36GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen3.36E-02
37GO:0016829: lyase activity3.49E-02
38GO:0004252: serine-type endopeptidase activity3.55E-02
39GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding3.62E-02
40GO:0005525: GTP binding4.57E-02
41GO:0003743: translation initiation factor activity4.63E-02
RankGO TermAdjusted P value
1GO:0080085: signal recognition particle, chloroplast targeting1.89E-04
2GO:0016605: PML body3.17E-04
3GO:0005786: signal recognition particle, endoplasmic reticulum targeting1.72E-03
4GO:0016604: nuclear body2.18E-03
5GO:0005743: mitochondrial inner membrane2.38E-03
6GO:0009505: plant-type cell wall4.07E-03
7GO:0042651: thylakoid membrane4.61E-03
8GO:0046658: anchored component of plasma membrane7.31E-03
9GO:0009507: chloroplast7.43E-03
10GO:0031977: thylakoid lumen1.67E-02
11GO:0009706: chloroplast inner membrane2.81E-02
12GO:0009543: chloroplast thylakoid lumen3.30E-02
13GO:0005623: cell3.36E-02
14GO:0009705: plant-type vacuole membrane4.14E-02
15GO:0031225: anchored component of membrane4.34E-02
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Gene type



Gene DE type