Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G20890

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0090359: negative regulation of abscisic acid biosynthetic process0.00E+00
2GO:0002764: immune response-regulating signaling pathway0.00E+00
3GO:0010365: positive regulation of ethylene biosynthetic process1.04E-04
4GO:0006123: mitochondrial electron transport, cytochrome c to oxygen2.44E-04
5GO:0031349: positive regulation of defense response2.44E-04
6GO:0010115: regulation of abscisic acid biosynthetic process2.44E-04
7GO:0010271: regulation of chlorophyll catabolic process2.44E-04
8GO:0010541: acropetal auxin transport2.44E-04
9GO:0051176: positive regulation of sulfur metabolic process4.05E-04
10GO:0016045: detection of bacterium4.05E-04
11GO:0034051: negative regulation of plant-type hypersensitive response4.05E-04
12GO:0010359: regulation of anion channel activity4.05E-04
13GO:0016226: iron-sulfur cluster assembly4.52E-04
14GO:0009626: plant-type hypersensitive response4.90E-04
15GO:0000187: activation of MAPK activity5.82E-04
16GO:0072583: clathrin-dependent endocytosis5.82E-04
17GO:0010508: positive regulation of autophagy7.73E-04
18GO:0007264: small GTPase mediated signal transduction8.74E-04
19GO:0010405: arabinogalactan protein metabolic process1.19E-03
20GO:0018258: protein O-linked glycosylation via hydroxyproline1.19E-03
21GO:2000037: regulation of stomatal complex patterning1.43E-03
22GO:0009423: chorismate biosynthetic process1.43E-03
23GO:0006499: N-terminal protein myristoylation1.66E-03
24GO:1900056: negative regulation of leaf senescence1.67E-03
25GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c1.67E-03
26GO:0048527: lateral root development1.73E-03
27GO:0009787: regulation of abscisic acid-activated signaling pathway1.93E-03
28GO:0010099: regulation of photomorphogenesis2.21E-03
29GO:0010204: defense response signaling pathway, resistance gene-independent2.21E-03
30GO:0051707: response to other organism2.44E-03
31GO:0051865: protein autoubiquitination2.49E-03
32GO:0048268: clathrin coat assembly2.79E-03
33GO:0048354: mucilage biosynthetic process involved in seed coat development2.79E-03
34GO:0010380: regulation of chlorophyll biosynthetic process2.79E-03
35GO:0009870: defense response signaling pathway, resistance gene-dependent3.10E-03
36GO:0009073: aromatic amino acid family biosynthetic process3.42E-03
37GO:0008361: regulation of cell size3.75E-03
38GO:0015706: nitrate transport3.75E-03
39GO:0010229: inflorescence development4.09E-03
40GO:0009785: blue light signaling pathway4.09E-03
41GO:0009620: response to fungus4.24E-03
42GO:0007034: vacuolar transport4.44E-03
43GO:0046854: phosphatidylinositol phosphorylation4.80E-03
44GO:0010167: response to nitrate4.80E-03
45GO:0006468: protein phosphorylation5.08E-03
46GO:0006487: protein N-linked glycosylation5.56E-03
47GO:0009269: response to desiccation6.35E-03
48GO:0010017: red or far-red light signaling pathway6.76E-03
49GO:0009814: defense response, incompatible interaction6.76E-03
50GO:0010227: floral organ abscission7.18E-03
51GO:0006284: base-excision repair7.61E-03
52GO:0006952: defense response7.72E-03
53GO:0010150: leaf senescence8.00E-03
54GO:0006470: protein dephosphorylation9.15E-03
55GO:0016032: viral process1.09E-02
56GO:0000910: cytokinesis1.29E-02
57GO:0016579: protein deubiquitination1.29E-02
58GO:0042128: nitrate assimilation1.45E-02
59GO:0006950: response to stress1.51E-02
60GO:0010200: response to chitin1.59E-02
61GO:0009817: defense response to fungus, incompatible interaction1.62E-02
62GO:0046777: protein autophosphorylation1.65E-02
63GO:0010043: response to zinc ion1.80E-02
64GO:0007568: aging1.80E-02
65GO:0045892: negative regulation of transcription, DNA-templated1.88E-02
66GO:0009867: jasmonic acid mediated signaling pathway1.92E-02
67GO:0006897: endocytosis2.17E-02
68GO:0009751: response to salicylic acid2.24E-02
69GO:0009744: response to sucrose2.30E-02
70GO:0009640: photomorphogenesis2.30E-02
71GO:0006855: drug transmembrane transport2.57E-02
72GO:0000165: MAPK cascade2.64E-02
73GO:0031347: regulation of defense response2.64E-02
74GO:0006486: protein glycosylation2.84E-02
75GO:0009909: regulation of flower development3.06E-02
76GO:0018105: peptidyl-serine phosphorylation3.73E-02
77GO:0009611: response to wounding4.12E-02
78GO:0009845: seed germination4.54E-02
RankGO TermAdjusted P value
1GO:0052821: DNA-7-methyladenine glycosylase activity0.00E+00
2GO:0003905: alkylbase DNA N-glycosylase activity0.00E+00
3GO:0004107: chorismate synthase activity0.00E+00
4GO:0052822: DNA-3-methylguanine glycosylase activity0.00E+00
5GO:0043916: DNA-7-methylguanine glycosylase activity0.00E+00
6GO:0005525: GTP binding2.18E-05
7GO:0032050: clathrin heavy chain binding1.04E-04
8GO:0008559: xenobiotic-transporting ATPase activity1.61E-04
9GO:0043424: protein histidine kinase binding3.76E-04
10GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity5.82E-04
11GO:0003924: GTPase activity7.40E-04
12GO:0019199: transmembrane receptor protein kinase activity7.73E-04
13GO:0070696: transmembrane receptor protein serine/threonine kinase binding9.77E-04
14GO:0008725: DNA-3-methyladenine glycosylase activity9.77E-04
15GO:1990714: hydroxyproline O-galactosyltransferase activity1.19E-03
16GO:0008375: acetylglucosaminyltransferase activity1.29E-03
17GO:0004708: MAP kinase kinase activity1.93E-03
18GO:0043531: ADP binding2.18E-03
19GO:0004430: 1-phosphatidylinositol 4-kinase activity2.21E-03
20GO:0015112: nitrate transmembrane transporter activity2.79E-03
21GO:0004568: chitinase activity3.10E-03
22GO:0005545: 1-phosphatidylinositol binding3.10E-03
23GO:0008047: enzyme activator activity3.10E-03
24GO:0008378: galactosyltransferase activity3.75E-03
25GO:0005515: protein binding3.82E-03
26GO:0016301: kinase activity4.05E-03
27GO:0003954: NADH dehydrogenase activity5.56E-03
28GO:0004674: protein serine/threonine kinase activity6.12E-03
29GO:0030276: clathrin binding8.95E-03
30GO:0010181: FMN binding9.42E-03
31GO:0004872: receptor activity9.90E-03
32GO:0042626: ATPase activity, coupled to transmembrane movement of substances1.02E-02
33GO:0004843: thiol-dependent ubiquitin-specific protease activity1.04E-02
34GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity1.24E-02
35GO:0009931: calcium-dependent protein serine/threonine kinase activity1.45E-02
36GO:0004683: calmodulin-dependent protein kinase activity1.51E-02
37GO:0015238: drug transmembrane transporter activity1.68E-02
38GO:0005509: calcium ion binding1.91E-02
39GO:0000987: core promoter proximal region sequence-specific DNA binding1.98E-02
40GO:0004722: protein serine/threonine phosphatase activity2.02E-02
41GO:0051537: 2 iron, 2 sulfur cluster binding2.43E-02
42GO:0005198: structural molecule activity2.50E-02
43GO:0003899: DNA-directed 5'-3' RNA polymerase activity2.84E-02
44GO:0008234: cysteine-type peptidase activity3.06E-02
45GO:0016758: transferase activity, transferring hexosyl groups4.21E-02
46GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen4.37E-02
RankGO TermAdjusted P value
1GO:0031304: intrinsic component of mitochondrial inner membrane2.44E-04
2GO:0005901: caveola2.44E-04
3GO:0005758: mitochondrial intermembrane space3.40E-04
4GO:0030139: endocytic vesicle4.05E-04
5GO:0000325: plant-type vacuole1.73E-03
6GO:0005886: plasma membrane2.51E-03
7GO:0030125: clathrin vesicle coat3.10E-03
8GO:0090404: pollen tube tip3.42E-03
9GO:0012505: endomembrane system4.50E-03
10GO:0070469: respiratory chain5.95E-03
11GO:0005905: clathrin-coated pit6.35E-03
12GO:0030136: clathrin-coated vesicle8.05E-03
13GO:0009504: cell plate9.90E-03
14GO:0005774: vacuolar membrane1.03E-02
15GO:0031902: late endosome membrane2.17E-02
16GO:0005635: nuclear envelope2.99E-02
17GO:0010008: endosome membrane3.28E-02
18GO:0005834: heterotrimeric G-protein complex3.35E-02
19GO:0005654: nucleoplasm4.21E-02
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Gene type



Gene DE type