co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G19010

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0033587: shikimate biosynthetic process	0.00E+00
2	GO:0009268: response to pH	0.00E+00
3	GO:0032499: detection of peptidoglycan	0.00E+00
4	GO:0002752: cell surface pattern recognition receptor signaling pathway	0.00E+00
5	GO:0071327: cellular response to trehalose stimulus	0.00E+00
6	GO:1900367: positive regulation of defense response to insect	0.00E+00
7	GO:0002764: immune response-regulating signaling pathway	0.00E+00
8	GO:0080142: regulation of salicylic acid biosynthetic process	1.47E-07
9	GO:0010200: response to chitin	2.97E-07
10	GO:0006468: protein phosphorylation	1.15E-06
11	GO:0031348: negative regulation of defense response	2.12E-06
12	GO:0046777: protein autophosphorylation	4.74E-06
13	GO:0009751: response to salicylic acid	1.28E-05
14	GO:0042742: defense response to bacterium	1.57E-05
15	GO:0000187: activation of MAPK activity	1.60E-05
16	GO:0009626: plant-type hypersensitive response	1.75E-05
17	GO:0060548: negative regulation of cell death	2.94E-05
18	GO:0009697: salicylic acid biosynthetic process	4.73E-05
19	GO:2000037: regulation of stomatal complex patterning	9.69E-05
20	GO:0030974: thiamine pyrophosphate transport	2.00E-04
21	GO:1901183: positive regulation of camalexin biosynthetic process	2.00E-04
22	GO:0032491: detection of molecule of fungal origin	2.00E-04
23	GO:0042759: long-chain fatty acid biosynthetic process	2.00E-04
24	GO:0010365: positive regulation of ethylene biosynthetic process	2.00E-04
25	GO:0051938: L-glutamate import	2.00E-04
26	GO:0051245: negative regulation of cellular defense response	2.00E-04
27	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	2.00E-04
28	GO:0010941: regulation of cell death	2.00E-04
29	GO:0051180: vitamin transport	2.00E-04
30	GO:0019673: GDP-mannose metabolic process	2.00E-04
31	GO:0006952: defense response	3.20E-04
32	GO:0043069: negative regulation of programmed cell death	3.48E-04
33	GO:0035556: intracellular signal transduction	4.40E-04
34	GO:0019725: cellular homeostasis	4.48E-04
35	GO:0002221: pattern recognition receptor signaling pathway	4.48E-04
36	GO:0043091: L-arginine import	4.48E-04
37	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	4.48E-04
38	GO:0015802: basic amino acid transport	4.48E-04
39	GO:0010618: aerenchyma formation	4.48E-04
40	GO:1902066: regulation of cell wall pectin metabolic process	4.48E-04
41	GO:0015893: drug transport	4.48E-04
42	GO:0010229: inflorescence development	5.25E-04
43	GO:0055046: microgametogenesis	5.25E-04
44	GO:0009867: jasmonic acid mediated signaling pathway	5.66E-04
45	GO:0070588: calcium ion transmembrane transport	6.61E-04
46	GO:0016045: detection of bacterium	7.29E-04
47	GO:0034051: negative regulation of plant-type hypersensitive response	7.29E-04
48	GO:1900140: regulation of seedling development	7.29E-04
49	GO:0010359: regulation of anion channel activity	7.29E-04
50	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	7.29E-04
51	GO:0051176: positive regulation of sulfur metabolic process	7.29E-04
52	GO:2001009: regulation of plant-type cell wall cellulose biosynthetic process	7.29E-04
53	GO:0010498: proteasomal protein catabolic process	7.29E-04
54	GO:1901672: positive regulation of systemic acquired resistance	7.29E-04
55	GO:0048586: regulation of long-day photoperiodism, flowering	7.29E-04
56	GO:0032922: circadian regulation of gene expression	7.29E-04
57	GO:0009617: response to bacterium	7.85E-04
58	GO:0009863: salicylic acid mediated signaling pathway	8.13E-04
59	GO:0006612: protein targeting to membrane	1.04E-03
60	GO:0071323: cellular response to chitin	1.04E-03
61	GO:0046513: ceramide biosynthetic process	1.04E-03
62	GO:0046836: glycolipid transport	1.04E-03
63	GO:0070301: cellular response to hydrogen peroxide	1.04E-03
64	GO:0010104: regulation of ethylene-activated signaling pathway	1.04E-03
65	GO:0072583: clathrin-dependent endocytosis	1.04E-03
66	GO:0010306: rhamnogalacturonan II biosynthetic process	1.04E-03
67	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.07E-03
68	GO:0009814: defense response, incompatible interaction	1.07E-03
69	GO:0016226: iron-sulfur cluster assembly	1.07E-03
70	GO:0010227: floral organ abscission	1.16E-03
71	GO:0071219: cellular response to molecule of bacterial origin	1.38E-03
72	GO:2000038: regulation of stomatal complex development	1.38E-03
73	GO:0010363: regulation of plant-type hypersensitive response	1.38E-03
74	GO:0010508: positive regulation of autophagy	1.38E-03
75	GO:0010107: potassium ion import	1.38E-03
76	GO:0018344: protein geranylgeranylation	1.76E-03
77	GO:0010225: response to UV-C	1.76E-03
78	GO:0018105: peptidyl-serine phosphorylation	1.82E-03
79	GO:1900425: negative regulation of defense response to bacterium	2.17E-03
80	GO:0002238: response to molecule of fungal origin	2.17E-03
81	GO:0010942: positive regulation of cell death	2.17E-03
82	GO:0010405: arabinogalactan protein metabolic process	2.17E-03
83	GO:0018258: protein O-linked glycosylation via hydroxyproline	2.17E-03
84	GO:0010310: regulation of hydrogen peroxide metabolic process	2.60E-03
85	GO:0009423: chorismate biosynthetic process	2.60E-03
86	GO:0009816: defense response to bacterium, incompatible interaction	2.96E-03
87	GO:0070370: cellular heat acclimation	3.06E-03
88	GO:0010161: red light signaling pathway	3.06E-03
89	GO:1900056: negative regulation of leaf senescence	3.06E-03
90	GO:0010150: leaf senescence	3.50E-03
91	GO:0045010: actin nucleation	3.55E-03
92	GO:0010204: defense response signaling pathway, resistance gene-independent	4.06E-03
93	GO:2000031: regulation of salicylic acid mediated signaling pathway	4.06E-03
94	GO:0010099: regulation of photomorphogenesis	4.06E-03
95	GO:0009932: cell tip growth	4.06E-03
96	GO:0006470: protein dephosphorylation	4.15E-03
97	GO:0090333: regulation of stomatal closure	4.60E-03
98	GO:0010112: regulation of systemic acquired resistance	4.60E-03
99	GO:0006098: pentose-phosphate shunt	4.60E-03
100	GO:0045087: innate immune response	4.61E-03
101	GO:1900426: positive regulation of defense response to bacterium	5.15E-03
102	GO:0048354: mucilage biosynthetic process involved in seed coat development	5.15E-03
103	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	5.15E-03
104	GO:0006887: exocytosis	5.48E-03
105	GO:0009870: defense response signaling pathway, resistance gene-dependent	5.74E-03
106	GO:0051707: response to other organism	5.94E-03
107	GO:0009073: aromatic amino acid family biosynthetic process	6.34E-03
108	GO:0006970: response to osmotic stress	6.70E-03
109	GO:0007165: signal transduction	6.81E-03
110	GO:0006855: drug transmembrane transport	6.93E-03
111	GO:0010105: negative regulation of ethylene-activated signaling pathway	6.96E-03
112	GO:0008361: regulation of cell size	6.96E-03
113	GO:0002213: defense response to insect	6.96E-03
114	GO:0000165: MAPK cascade	7.20E-03
115	GO:0018107: peptidyl-threonine phosphorylation	7.61E-03
116	GO:0009785: blue light signaling pathway	7.61E-03
117	GO:0007034: vacuolar transport	8.28E-03
118	GO:0009266: response to temperature stimulus	8.28E-03
119	GO:0034605: cellular response to heat	8.28E-03
120	GO:0002237: response to molecule of bacterial origin	8.28E-03
121	GO:0009909: regulation of flower development	8.87E-03
122	GO:0046854: phosphatidylinositol phosphorylation	8.97E-03
123	GO:0009620: response to fungus	1.04E-02
124	GO:0006487: protein N-linked glycosylation	1.04E-02
125	GO:0003333: amino acid transmembrane transport	1.19E-02
126	GO:0048278: vesicle docking	1.19E-02
127	GO:0071456: cellular response to hypoxia	1.27E-02
128	GO:0010017: red or far-red light signaling pathway	1.27E-02
129	GO:0009408: response to heat	1.32E-02
130	GO:0009625: response to insect	1.35E-02
131	GO:0019722: calcium-mediated signaling	1.43E-02
132	GO:0009561: megagametogenesis	1.43E-02
133	GO:0009753: response to jasmonic acid	1.44E-02
134	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.52E-02
135	GO:0010118: stomatal movement	1.60E-02
136	GO:0042391: regulation of membrane potential	1.60E-02
137	GO:0006885: regulation of pH	1.69E-02
138	GO:0061025: membrane fusion	1.78E-02
139	GO:0006891: intra-Golgi vesicle-mediated transport	1.97E-02
140	GO:0002229: defense response to oomycetes	1.97E-02
141	GO:0016032: viral process	2.06E-02
142	GO:0009737: response to abscisic acid	2.14E-02
143	GO:0030163: protein catabolic process	2.16E-02
144	GO:0009739: response to gibberellin	2.22E-02
145	GO:0007166: cell surface receptor signaling pathway	2.27E-02
146	GO:0006904: vesicle docking involved in exocytosis	2.35E-02
147	GO:0000910: cytokinesis	2.45E-02
148	GO:0001666: response to hypoxia	2.55E-02
149	GO:0009615: response to virus	2.55E-02
150	GO:0009911: positive regulation of flower development	2.55E-02
151	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.66E-02
152	GO:0009627: systemic acquired resistance	2.76E-02
153	GO:0006906: vesicle fusion	2.76E-02
154	GO:0048573: photoperiodism, flowering	2.87E-02
155	GO:0008219: cell death	3.09E-02
156	GO:0009817: defense response to fungus, incompatible interaction	3.09E-02
157	GO:0009409: response to cold	3.13E-02
158	GO:0007568: aging	3.42E-02
159	GO:0009631: cold acclimation	3.42E-02
160	GO:0048527: lateral root development	3.42E-02
161	GO:0010119: regulation of stomatal movement	3.42E-02
162	GO:0050832: defense response to fungus	3.72E-02
163	GO:0006839: mitochondrial transport	4.01E-02
164	GO:0009744: response to sucrose	4.37E-02
165	GO:0009640: photomorphogenesis	4.37E-02
166	GO:0000209: protein polyubiquitination	4.50E-02
167	GO:0045454: cell redox homeostasis	4.54E-02
168	GO:0045892: negative regulation of transcription, DNA-templated	4.61E-02
169	GO:0006886: intracellular protein transport	4.68E-02

Rank	GO Term	Adjusted P value
1	GO:2001080: chitosan binding	0.00E+00
2	GO:0005522: profilin binding	0.00E+00
3	GO:0004107: chorismate synthase activity	0.00E+00
4	GO:0016301: kinase activity	2.25E-09
5	GO:0004674: protein serine/threonine kinase activity	2.46E-06
6	GO:0005524: ATP binding	1.13E-05
7	GO:0005515: protein binding	1.46E-05
8	GO:0019199: transmembrane receptor protein kinase activity	2.94E-05
9	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	4.73E-05
10	GO:0004708: MAP kinase kinase activity	1.64E-04
11	GO:0032050: clathrin heavy chain binding	2.00E-04
12	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	2.00E-04
13	GO:0090422: thiamine pyrophosphate transporter activity	2.00E-04
14	GO:0004662: CAAX-protein geranylgeranyltransferase activity	2.00E-04
15	GO:0015085: calcium ion transmembrane transporter activity	2.00E-04
16	GO:0008446: GDP-mannose 4,6-dehydratase activity	2.00E-04
17	GO:0004672: protein kinase activity	2.78E-04
18	GO:0050291: sphingosine N-acyltransferase activity	4.48E-04
19	GO:0005388: calcium-transporting ATPase activity	5.25E-04
20	GO:0043424: protein histidine kinase binding	8.95E-04
21	GO:0005516: calmodulin binding	8.96E-04
22	GO:0033612: receptor serine/threonine kinase binding	9.79E-04
23	GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity	1.04E-03
24	GO:0015189: L-lysine transmembrane transporter activity	1.04E-03
25	GO:0017089: glycolipid transporter activity	1.04E-03
26	GO:0015181: arginine transmembrane transporter activity	1.04E-03
27	GO:0005509: calcium ion binding	1.37E-03
28	GO:0051861: glycolipid binding	1.38E-03
29	GO:0005313: L-glutamate transmembrane transporter activity	1.38E-03
30	GO:0035252: UDP-xylosyltransferase activity	2.17E-03
31	GO:1990714: hydroxyproline O-galactosyltransferase activity	2.17E-03
32	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.50E-03
33	GO:0019900: kinase binding	2.60E-03
34	GO:0008375: acetylglucosaminyltransferase activity	3.12E-03
35	GO:0009931: calcium-dependent protein serine/threonine kinase activity	3.12E-03
36	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.20E-03
37	GO:0004683: calmodulin-dependent protein kinase activity	3.29E-03
38	GO:0004714: transmembrane receptor protein tyrosine kinase activity	3.55E-03
39	GO:0015238: drug transmembrane transporter activity	3.83E-03
40	GO:0004430: 1-phosphatidylinositol 4-kinase activity	4.06E-03
41	GO:0071949: FAD binding	4.60E-03
42	GO:0015174: basic amino acid transmembrane transporter activity	5.15E-03
43	GO:0043565: sequence-specific DNA binding	5.66E-03
44	GO:0004568: chitinase activity	5.74E-03
45	GO:0008047: enzyme activator activity	5.74E-03
46	GO:0005543: phospholipid binding	6.34E-03
47	GO:0008559: xenobiotic-transporting ATPase activity	6.34E-03
48	GO:0043531: ADP binding	6.86E-03
49	GO:0008378: galactosyltransferase activity	6.96E-03
50	GO:0031072: heat shock protein binding	7.61E-03
51	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	8.28E-03
52	GO:0016298: lipase activity	8.29E-03
53	GO:0008234: cysteine-type peptidase activity	8.87E-03
54	GO:0008061: chitin binding	8.97E-03
55	GO:0004190: aspartic-type endopeptidase activity	8.97E-03
56	GO:0030552: cAMP binding	8.97E-03
57	GO:0030553: cGMP binding	8.97E-03
58	GO:0003954: NADH dehydrogenase activity	1.04E-02
59	GO:0005216: ion channel activity	1.12E-02
60	GO:0004722: protein serine/threonine phosphatase activity	1.13E-02
61	GO:0015035: protein disulfide oxidoreductase activity	1.18E-02
62	GO:0004707: MAP kinase activity	1.19E-02
63	GO:0005451: monovalent cation:proton antiporter activity	1.60E-02
64	GO:0005249: voltage-gated potassium channel activity	1.60E-02
65	GO:0030551: cyclic nucleotide binding	1.60E-02
66	GO:0015299: solute:proton antiporter activity	1.78E-02
67	GO:0010181: FMN binding	1.78E-02
68	GO:0004872: receptor activity	1.87E-02
69	GO:0015297: antiporter activity	1.89E-02
70	GO:0015385: sodium:proton antiporter activity	2.16E-02
71	GO:0051015: actin filament binding	2.16E-02
72	GO:0004721: phosphoprotein phosphatase activity	2.87E-02
73	GO:0004806: triglyceride lipase activity	2.87E-02
74	GO:0004842: ubiquitin-protein transferase activity	3.23E-02
75	GO:0000987: core promoter proximal region sequence-specific DNA binding	3.77E-02
76	GO:0000149: SNARE binding	3.89E-02
77	GO:0005484: SNAP receptor activity	4.37E-02
78	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	4.54E-02
79	GO:0051537: 2 iron, 2 sulfur cluster binding	4.62E-02
80	GO:0005198: structural molecule activity	4.75E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	4.82E-07
2	GO:0005911: cell-cell junction	2.00E-04
3	GO:0005953: CAAX-protein geranylgeranyltransferase complex	2.00E-04
4	GO:0005901: caveola	4.48E-04
5	GO:0031304: intrinsic component of mitochondrial inner membrane	4.48E-04
6	GO:0030139: endocytic vesicle	7.29E-04
7	GO:0012505: endomembrane system	1.69E-03
8	GO:0016021: integral component of membrane	2.82E-03
9	GO:0030125: clathrin vesicle coat	5.74E-03
10	GO:0090406: pollen tube	5.94E-03
11	GO:0005795: Golgi stack	8.97E-03
12	GO:0005758: mitochondrial intermembrane space	1.04E-02
13	GO:0005770: late endosome	1.69E-02
14	GO:0009504: cell plate	1.87E-02
15	GO:0005887: integral component of plasma membrane	1.94E-02
16	GO:0000145: exocyst	2.06E-02
17	GO:0046658: anchored component of plasma membrane	2.62E-02
18	GO:0000151: ubiquitin ligase complex	3.09E-02
19	GO:0000325: plant-type vacuole	3.42E-02
20	GO:0031902: late endosome membrane	4.13E-02
21	GO:0031201: SNARE complex	4.13E-02
22	GO:0005794: Golgi apparatus	4.50E-02
23	GO:0005774: vacuolar membrane	4.77E-02