co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G18530

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0080127: fruit septum development	0.00E+00
2	GO:0046486: glycerolipid metabolic process	0.00E+00
3	GO:0006907: pinocytosis	0.00E+00
4	GO:0045014: negative regulation of transcription by glucose	0.00E+00
5	GO:0009733: response to auxin	4.54E-05
6	GO:0032958: inositol phosphate biosynthetic process	3.09E-04
7	GO:0051013: microtubule severing	3.09E-04
8	GO:0045786: negative regulation of cell cycle	3.09E-04
9	GO:0010726: positive regulation of hydrogen peroxide metabolic process	3.09E-04
10	GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic	3.09E-04
11	GO:0010583: response to cyclopentenone	4.49E-04
12	GO:0061062: regulation of nematode larval development	6.76E-04
13	GO:0001736: establishment of planar polarity	6.76E-04
14	GO:0043039: tRNA aminoacylation	6.76E-04
15	GO:0006423: cysteinyl-tRNA aminoacylation	6.76E-04
16	GO:0006650: glycerophospholipid metabolic process	6.76E-04
17	GO:0009734: auxin-activated signaling pathway	8.93E-04
18	GO:0009887: animal organ morphogenesis	1.08E-03
19	GO:0006518: peptide metabolic process	1.10E-03
20	GO:0016045: detection of bacterium	1.10E-03
21	GO:0042780: tRNA 3'-end processing	1.10E-03
22	GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic	1.10E-03
23	GO:0090506: axillary shoot meristem initiation	1.10E-03
24	GO:0046168: glycerol-3-phosphate catabolic process	1.10E-03
25	GO:0010226: response to lithium ion	1.10E-03
26	GO:0009825: multidimensional cell growth	1.21E-03
27	GO:0006424: glutamyl-tRNA aminoacylation	1.57E-03
28	GO:0045017: glycerolipid biosynthetic process	1.57E-03
29	GO:0006020: inositol metabolic process	1.57E-03
30	GO:0007276: gamete generation	1.57E-03
31	GO:0006072: glycerol-3-phosphate metabolic process	1.57E-03
32	GO:0042991: transcription factor import into nucleus	2.11E-03
33	GO:0006021: inositol biosynthetic process	2.11E-03
34	GO:0009956: radial pattern formation	2.11E-03
35	GO:0009686: gibberellin biosynthetic process	2.15E-03
36	GO:0010091: trichome branching	2.33E-03
37	GO:0042127: regulation of cell proliferation	2.33E-03
38	GO:0048497: maintenance of floral organ identity	2.69E-03
39	GO:0009958: positive gravitropism	2.94E-03
40	GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	3.32E-03
41	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	3.32E-03
42	GO:0003006: developmental process involved in reproduction	3.32E-03
43	GO:0010942: positive regulation of cell death	3.32E-03
44	GO:0045736: negative regulation of cyclin-dependent protein serine/threonine kinase activity	3.32E-03
45	GO:0016554: cytidine to uridine editing	3.32E-03
46	GO:0009624: response to nematode	3.91E-03
47	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	4.00E-03
48	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	4.00E-03
49	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.43E-03
50	GO:0000082: G1/S transition of mitotic cell cycle	4.72E-03
51	GO:0010444: guard mother cell differentiation	4.72E-03
52	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	4.72E-03
53	GO:0009610: response to symbiotic fungus	4.72E-03
54	GO:0007050: cell cycle arrest	4.72E-03
55	GO:1900056: negative regulation of leaf senescence	4.72E-03
56	GO:0009416: response to light stimulus	5.15E-03
57	GO:0010492: maintenance of shoot apical meristem identity	5.48E-03
58	GO:0000105: histidine biosynthetic process	5.48E-03
59	GO:0032544: plastid translation	6.28E-03
60	GO:0007186: G-protein coupled receptor signaling pathway	6.28E-03
61	GO:0046916: cellular transition metal ion homeostasis	7.12E-03
62	GO:0048589: developmental growth	7.12E-03
63	GO:0009056: catabolic process	7.12E-03
64	GO:0048507: meristem development	7.12E-03
65	GO:0009832: plant-type cell wall biogenesis	7.20E-03
66	GO:1900865: chloroplast RNA modification	8.01E-03
67	GO:0048829: root cap development	8.92E-03
68	GO:0009641: shade avoidance	8.92E-03
69	GO:0006949: syncytium formation	8.92E-03
70	GO:0010192: mucilage biosynthetic process	8.92E-03
71	GO:0006782: protoporphyrinogen IX biosynthetic process	8.92E-03
72	GO:0009089: lysine biosynthetic process via diaminopimelate	9.88E-03
73	GO:0009750: response to fructose	9.88E-03
74	GO:0048765: root hair cell differentiation	9.88E-03
75	GO:0008285: negative regulation of cell proliferation	9.88E-03
76	GO:0030001: metal ion transport	9.92E-03
77	GO:0006351: transcription, DNA-templated	9.96E-03
78	GO:0010582: floral meristem determinacy	1.09E-02
79	GO:0010152: pollen maturation	1.09E-02
80	GO:0006790: sulfur compound metabolic process	1.09E-02
81	GO:0005983: starch catabolic process	1.09E-02
82	GO:0045037: protein import into chloroplast stroma	1.09E-02
83	GO:0009926: auxin polar transport	1.12E-02
84	GO:0009744: response to sucrose	1.12E-02
85	GO:0010102: lateral root morphogenesis	1.19E-02
86	GO:0010223: secondary shoot formation	1.30E-02
87	GO:0010540: basipetal auxin transport	1.30E-02
88	GO:0006302: double-strand break repair	1.30E-02
89	GO:0048467: gynoecium development	1.30E-02
90	GO:0009933: meristem structural organization	1.30E-02
91	GO:0046854: phosphatidylinositol phosphorylation	1.40E-02
92	GO:0009664: plant-type cell wall organization	1.41E-02
93	GO:0009736: cytokinin-activated signaling pathway	1.52E-02
94	GO:0006636: unsaturated fatty acid biosynthetic process	1.52E-02
95	GO:0006863: purine nucleobase transport	1.52E-02
96	GO:0009833: plant-type primary cell wall biogenesis	1.52E-02
97	GO:0006364: rRNA processing	1.52E-02
98	GO:0071555: cell wall organization	1.75E-02
99	GO:0019953: sexual reproduction	1.75E-02
100	GO:0006418: tRNA aminoacylation for protein translation	1.75E-02
101	GO:0006874: cellular calcium ion homeostasis	1.75E-02
102	GO:0043622: cortical microtubule organization	1.75E-02
103	GO:0051321: meiotic cell cycle	1.87E-02
104	GO:0003333: amino acid transmembrane transport	1.87E-02
105	GO:0007005: mitochondrion organization	2.00E-02
106	GO:0009740: gibberellic acid mediated signaling pathway	2.04E-02
107	GO:0051301: cell division	2.06E-02
108	GO:0001944: vasculature development	2.12E-02
109	GO:0048443: stamen development	2.25E-02
110	GO:0045892: negative regulation of transcription, DNA-templated	2.30E-02
111	GO:0051726: regulation of cell cycle	2.30E-02
112	GO:0000271: polysaccharide biosynthetic process	2.52E-02
113	GO:0000413: protein peptidyl-prolyl isomerization	2.52E-02
114	GO:0048653: anther development	2.52E-02
115	GO:0000226: microtubule cytoskeleton organization	2.52E-02
116	GO:0010305: leaf vascular tissue pattern formation	2.66E-02
117	GO:0009741: response to brassinosteroid	2.66E-02
118	GO:0045489: pectin biosynthetic process	2.66E-02
119	GO:0007018: microtubule-based movement	2.80E-02
120	GO:0048825: cotyledon development	2.95E-02
121	GO:0009749: response to glucose	2.95E-02
122	GO:0008654: phospholipid biosynthetic process	2.95E-02
123	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	3.09E-02
124	GO:0071554: cell wall organization or biogenesis	3.09E-02
125	GO:0002229: defense response to oomycetes	3.09E-02
126	GO:0032502: developmental process	3.24E-02
127	GO:0009639: response to red or far red light	3.55E-02
128	GO:0009828: plant-type cell wall loosening	3.55E-02
129	GO:0019760: glucosinolate metabolic process	3.55E-02
130	GO:0040008: regulation of growth	3.57E-02
131	GO:0045490: pectin catabolic process	3.74E-02
132	GO:0000910: cytokinesis	3.86E-02
133	GO:0016126: sterol biosynthetic process	4.02E-02
134	GO:0009739: response to gibberellin	4.18E-02
135	GO:0006470: protein dephosphorylation	4.27E-02
136	GO:0009627: systemic acquired resistance	4.35E-02
137	GO:0010411: xyloglucan metabolic process	4.51E-02
138	GO:0048573: photoperiodism, flowering	4.51E-02
139	GO:0015995: chlorophyll biosynthetic process	4.51E-02
140	GO:0016567: protein ubiquitination	4.67E-02
141	GO:0006355: regulation of transcription, DNA-templated	4.72E-02
142	GO:0048481: plant ovule development	4.85E-02
143	GO:0030244: cellulose biosynthetic process	4.85E-02
144	GO:0009817: defense response to fungus, incompatible interaction	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0047793: cycloeucalenol cycloisomerase activity	0.00E+00
2	GO:0009899: ent-kaurene synthase activity	0.00E+00
3	GO:0052834: inositol monophosphate phosphatase activity	0.00E+00
4	GO:0004401: histidinol-phosphatase activity	0.00E+00
5	GO:0010011: auxin binding	6.18E-05
6	GO:0004818: glutamate-tRNA ligase activity	3.09E-04
7	GO:0008568: microtubule-severing ATPase activity	3.09E-04
8	GO:0033857: diphosphoinositol-pentakisphosphate kinase activity	3.09E-04
9	GO:0010347: L-galactose-1-phosphate phosphatase activity	3.09E-04
10	GO:0000829: inositol heptakisphosphate kinase activity	3.09E-04
11	GO:0008836: diaminopimelate decarboxylase activity	3.09E-04
12	GO:0000828: inositol hexakisphosphate kinase activity	3.09E-04
13	GO:0019156: isoamylase activity	6.76E-04
14	GO:0010296: prenylcysteine methylesterase activity	6.76E-04
15	GO:0052832: inositol monophosphate 3-phosphatase activity	6.76E-04
16	GO:0004817: cysteine-tRNA ligase activity	6.76E-04
17	GO:0004109: coproporphyrinogen oxidase activity	6.76E-04
18	GO:0008805: carbon-monoxide oxygenase activity	6.76E-04
19	GO:0008934: inositol monophosphate 1-phosphatase activity	6.76E-04
20	GO:0052833: inositol monophosphate 4-phosphatase activity	6.76E-04
21	GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity	1.10E-03
22	GO:0016707: gibberellin 3-beta-dioxygenase activity	1.10E-03
23	GO:0042781: 3'-tRNA processing endoribonuclease activity	1.10E-03
24	GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity	1.57E-03
25	GO:0004930: G-protein coupled receptor activity	2.11E-03
26	GO:0010328: auxin influx transmembrane transporter activity	2.11E-03
27	GO:0030570: pectate lyase activity	2.15E-03
28	GO:0030332: cyclin binding	3.32E-03
29	GO:0004556: alpha-amylase activity	3.32E-03
30	GO:0004462: lactoylglutathione lyase activity	3.32E-03
31	GO:0004861: cyclin-dependent protein serine/threonine kinase inhibitor activity	3.32E-03
32	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	4.00E-03
33	GO:0043565: sequence-specific DNA binding	4.38E-03
34	GO:0016759: cellulose synthase activity	4.40E-03
35	GO:0003700: transcription factor activity, sequence-specific DNA binding	4.93E-03
36	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	6.28E-03
37	GO:0046914: transition metal ion binding	6.28E-03
38	GO:0000049: tRNA binding	1.09E-02
39	GO:0003725: double-stranded RNA binding	1.19E-02
40	GO:0005217: intracellular ligand-gated ion channel activity	1.40E-02
41	GO:0003712: transcription cofactor activity	1.40E-02
42	GO:0004970: ionotropic glutamate receptor activity	1.40E-02
43	GO:0008134: transcription factor binding	1.63E-02
44	GO:0005345: purine nucleobase transmembrane transporter activity	1.75E-02
45	GO:0033612: receptor serine/threonine kinase binding	1.87E-02
46	GO:0008408: 3'-5' exonuclease activity	1.87E-02
47	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	2.00E-02
48	GO:0005515: protein binding	2.02E-02
49	GO:0003779: actin binding	2.10E-02
50	GO:0016760: cellulose synthase (UDP-forming) activity	2.12E-02
51	GO:0004812: aminoacyl-tRNA ligase activity	2.39E-02
52	GO:0004871: signal transducer activity	2.39E-02
53	GO:0004722: protein serine/threonine phosphatase activity	2.53E-02
54	GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity	2.66E-02
55	GO:0001085: RNA polymerase II transcription factor binding	2.66E-02
56	GO:0016853: isomerase activity	2.80E-02
57	GO:0016829: lyase activity	2.93E-02
58	GO:0019901: protein kinase binding	2.95E-02
59	GO:0016762: xyloglucan:xyloglucosyl transferase activity	3.09E-02
60	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	3.09E-02
61	GO:0009055: electron carrier activity	3.20E-02
62	GO:0004672: protein kinase activity	3.34E-02
63	GO:0000156: phosphorelay response regulator activity	3.39E-02
64	GO:0016791: phosphatase activity	3.55E-02
65	GO:0016413: O-acetyltransferase activity	3.86E-02
66	GO:0008017: microtubule binding	3.91E-02
67	GO:0016798: hydrolase activity, acting on glycosyl bonds	4.51E-02
68	GO:0008236: serine-type peptidase activity	4.68E-02
69	GO:0042802: identical protein binding	4.73E-02

Rank	GO Term	Adjusted P value
1	GO:0043224: nuclear SCF ubiquitin ligase complex	0.00E+00
2	GO:0000791: euchromatin	3.09E-04
3	GO:0030870: Mre11 complex	6.76E-04
4	GO:0009569: chloroplast starch grain	6.76E-04
5	GO:0009331: glycerol-3-phosphate dehydrogenase complex	1.57E-03
6	GO:0009531: secondary cell wall	1.57E-03
7	GO:0000795: synaptonemal complex	2.69E-03
8	GO:0009986: cell surface	4.72E-03
9	GO:0042644: chloroplast nucleoid	7.12E-03
10	GO:0046658: anchored component of plasma membrane	1.12E-02
11	GO:0005875: microtubule associated complex	1.52E-02
12	GO:0005874: microtubule	1.72E-02
13	GO:0000785: chromatin	3.24E-02
14	GO:0031225: anchored component of membrane	3.49E-02
15	GO:0010319: stromule	3.70E-02
16	GO:0009570: chloroplast stroma	4.23E-02
17	GO:0005667: transcription factor complex	4.35E-02
18	GO:0009707: chloroplast outer membrane	4.85E-02