co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G18330

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0045014: negative regulation of transcription by glucose	0.00E+00
2	GO:0010422: regulation of brassinosteroid biosynthetic process	0.00E+00
3	GO:0080127: fruit septum development	0.00E+00
4	GO:0009733: response to auxin	1.07E-06
5	GO:0043039: tRNA aminoacylation	4.22E-06
6	GO:0061062: regulation of nematode larval development	4.22E-06
7	GO:0006351: transcription, DNA-templated	1.78E-04
8	GO:0009686: gibberellin biosynthetic process	1.95E-04
9	GO:0009734: auxin-activated signaling pathway	1.99E-04
10	GO:0048016: inositol phosphate-mediated signaling	3.04E-04
11	GO:0006434: seryl-tRNA aminoacylation	3.04E-04
12	GO:0010726: positive regulation of hydrogen peroxide metabolic process	3.04E-04
13	GO:0046520: sphingoid biosynthetic process	3.04E-04
14	GO:0097056: selenocysteinyl-tRNA(Sec) biosynthetic process	3.04E-04
15	GO:0032958: inositol phosphate biosynthetic process	3.04E-04
16	GO:0046620: regulation of organ growth	3.09E-04
17	GO:0031648: protein destabilization	6.66E-04
18	GO:0006423: cysteinyl-tRNA aminoacylation	6.66E-04
19	GO:0010588: cotyledon vascular tissue pattern formation	9.40E-04
20	GO:0009887: animal organ morphogenesis	1.06E-03
21	GO:0071398: cellular response to fatty acid	1.08E-03
22	GO:0048575: short-day photoperiodism, flowering	1.08E-03
23	GO:0090506: axillary shoot meristem initiation	1.08E-03
24	GO:0010321: regulation of vegetative phase change	1.55E-03
25	GO:0006020: inositol metabolic process	1.55E-03
26	GO:0043207: response to external biotic stimulus	1.55E-03
27	GO:0007276: gamete generation	1.55E-03
28	GO:0006424: glutamyl-tRNA aminoacylation	1.55E-03
29	GO:0006355: regulation of transcription, DNA-templated	1.62E-03
30	GO:0007005: mitochondrion organization	1.92E-03
31	GO:0048629: trichome patterning	2.07E-03
32	GO:0042991: transcription factor import into nucleus	2.07E-03
33	GO:0032957: inositol trisphosphate metabolic process	2.65E-03
34	GO:0045487: gibberellin catabolic process	2.65E-03
35	GO:0016131: brassinosteroid metabolic process	2.65E-03
36	GO:0048497: maintenance of floral organ identity	2.65E-03
37	GO:0010305: leaf vascular tissue pattern formation	2.88E-03
38	GO:0010942: positive regulation of cell death	3.27E-03
39	GO:0010358: leaf shaping	3.27E-03
40	GO:0046855: inositol phosphate dephosphorylation	3.27E-03
41	GO:1902456: regulation of stomatal opening	3.27E-03
42	GO:0003006: developmental process involved in reproduction	3.27E-03
43	GO:0016132: brassinosteroid biosynthetic process	3.55E-03
44	GO:0048366: leaf development	3.75E-03
45	GO:0010583: response to cyclopentenone	3.79E-03
46	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	3.93E-03
47	GO:0010067: procambium histogenesis	3.93E-03
48	GO:0006694: steroid biosynthetic process	3.93E-03
49	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.27E-03
50	GO:0019760: glucosinolate metabolic process	4.30E-03
51	GO:0030497: fatty acid elongation	4.64E-03
52	GO:0010492: maintenance of shoot apical meristem identity	5.39E-03
53	GO:0042255: ribosome assembly	5.39E-03
54	GO:0006353: DNA-templated transcription, termination	5.39E-03
55	GO:0006402: mRNA catabolic process	5.39E-03
56	GO:0009704: de-etiolation	5.39E-03
57	GO:0071555: cell wall organization	5.40E-03
58	GO:0045892: negative regulation of transcription, DNA-templated	5.47E-03
59	GO:0048573: photoperiodism, flowering	6.04E-03
60	GO:0048481: plant ovule development	6.69E-03
61	GO:0009056: catabolic process	7.01E-03
62	GO:0048507: meristem development	7.01E-03
63	GO:0051865: protein autoubiquitination	7.01E-03
64	GO:0048589: developmental growth	7.01E-03
65	GO:0016567: protein ubiquitination	7.15E-03
66	GO:0040008: regulation of growth	7.17E-03
67	GO:0048364: root development	7.83E-03
68	GO:0009641: shade avoidance	8.77E-03
69	GO:0006949: syncytium formation	8.77E-03
70	GO:0046856: phosphatidylinositol dephosphorylation	9.71E-03
71	GO:0008285: negative regulation of cell proliferation	9.71E-03
72	GO:0012501: programmed cell death	1.07E-02
73	GO:0010582: floral meristem determinacy	1.07E-02
74	GO:0010152: pollen maturation	1.07E-02
75	GO:0009926: auxin polar transport	1.10E-02
76	GO:0042546: cell wall biogenesis	1.14E-02
77	GO:0010102: lateral root morphogenesis	1.17E-02
78	GO:2000028: regulation of photoperiodism, flowering	1.17E-02
79	GO:0009266: response to temperature stimulus	1.27E-02
80	GO:0006302: double-strand break repair	1.27E-02
81	GO:0048467: gynoecium development	1.27E-02
82	GO:0009826: unidimensional cell growth	1.27E-02
83	GO:0010223: secondary shoot formation	1.27E-02
84	GO:0009658: chloroplast organization	1.33E-02
85	GO:0009664: plant-type cell wall organization	1.38E-02
86	GO:0090351: seedling development	1.38E-02
87	GO:0009736: cytokinin-activated signaling pathway	1.48E-02
88	GO:0006863: purine nucleobase transport	1.49E-02
89	GO:0006636: unsaturated fatty acid biosynthetic process	1.49E-02
90	GO:0009908: flower development	1.50E-02
91	GO:0080147: root hair cell development	1.60E-02
92	GO:0019953: sexual reproduction	1.72E-02
93	GO:0006418: tRNA aminoacylation for protein translation	1.72E-02
94	GO:0009416: response to light stimulus	1.75E-02
95	GO:0048367: shoot system development	1.81E-02
96	GO:0006306: DNA methylation	1.84E-02
97	GO:0051321: meiotic cell cycle	1.84E-02
98	GO:0016114: terpenoid biosynthetic process	1.84E-02
99	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.96E-02
100	GO:0009740: gibberellic acid mediated signaling pathway	1.99E-02
101	GO:0007275: multicellular organism development	2.00E-02
102	GO:0009693: ethylene biosynthetic process	2.09E-02
103	GO:0071215: cellular response to abscisic acid stimulus	2.09E-02
104	GO:0001944: vasculature development	2.09E-02
105	GO:0009624: response to nematode	2.11E-02
106	GO:0048443: stamen development	2.22E-02
107	GO:0010091: trichome branching	2.22E-02
108	GO:0042127: regulation of cell proliferation	2.22E-02
109	GO:0010087: phloem or xylem histogenesis	2.48E-02
110	GO:0010118: stomatal movement	2.48E-02
111	GO:0000271: polysaccharide biosynthetic process	2.48E-02
112	GO:0080022: primary root development	2.48E-02
113	GO:0010051: xylem and phloem pattern formation	2.48E-02
114	GO:0010182: sugar mediated signaling pathway	2.62E-02
115	GO:0009741: response to brassinosteroid	2.62E-02
116	GO:0010268: brassinosteroid homeostasis	2.62E-02
117	GO:0045489: pectin biosynthetic process	2.62E-02
118	GO:0016042: lipid catabolic process	2.75E-02
119	GO:0007018: microtubule-based movement	2.76E-02
120	GO:0009646: response to absence of light	2.76E-02
121	GO:0048825: cotyledon development	2.90E-02
122	GO:0071554: cell wall organization or biogenesis	3.04E-02
123	GO:0002229: defense response to oomycetes	3.04E-02
124	GO:0032502: developmental process	3.19E-02
125	GO:1901657: glycosyl compound metabolic process	3.33E-02
126	GO:0030163: protein catabolic process	3.33E-02
127	GO:0016125: sterol metabolic process	3.49E-02
128	GO:0009828: plant-type cell wall loosening	3.49E-02
129	GO:0010027: thylakoid membrane organization	3.95E-02
130	GO:0009739: response to gibberellin	4.08E-02
131	GO:0006470: protein dephosphorylation	4.17E-02
132	GO:0010411: xyloglucan metabolic process	4.44E-02
133	GO:0009817: defense response to fungus, incompatible interaction	4.77E-02
134	GO:0000160: phosphorelay signal transduction system	4.94E-02
135	GO:0009813: flavonoid biosynthetic process	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0009899: ent-kaurene synthase activity	0.00E+00
2	GO:0008922: long-chain fatty acid [acyl-carrier-protein] ligase activity	0.00E+00
3	GO:0071633: dihydroceramidase activity	0.00E+00
4	GO:0033857: diphosphoinositol-pentakisphosphate kinase activity	3.04E-04
5	GO:0010012: steroid 22-alpha hydroxylase activity	3.04E-04
6	GO:0000170: sphingosine hydroxylase activity	3.04E-04
7	GO:0000829: inositol heptakisphosphate kinase activity	3.04E-04
8	GO:0004828: serine-tRNA ligase activity	3.04E-04
9	GO:0046030: inositol trisphosphate phosphatase activity	3.04E-04
10	GO:0000828: inositol hexakisphosphate kinase activity	3.04E-04
11	GO:0004818: glutamate-tRNA ligase activity	3.04E-04
12	GO:0045543: gibberellin 2-beta-dioxygenase activity	6.66E-04
13	GO:0010296: prenylcysteine methylesterase activity	6.66E-04
14	GO:0004817: cysteine-tRNA ligase activity	6.66E-04
15	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	6.66E-04
16	GO:0042284: sphingolipid delta-4 desaturase activity	6.66E-04
17	GO:0045544: gibberellin 20-oxidase activity	1.55E-03
18	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	1.55E-03
19	GO:0008408: 3'-5' exonuclease activity	1.76E-03
20	GO:0010011: auxin binding	2.07E-03
21	GO:0003700: transcription factor activity, sequence-specific DNA binding	2.38E-03
22	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	2.65E-03
23	GO:0004523: RNA-DNA hybrid ribonuclease activity	2.65E-03
24	GO:0004709: MAP kinase kinase kinase activity	3.27E-03
25	GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity	3.27E-03
26	GO:0004518: nuclease activity	3.79E-03
27	GO:0016832: aldehyde-lyase activity	3.93E-03
28	GO:0003886: DNA (cytosine-5-)-methyltransferase activity	3.93E-03
29	GO:0043565: sequence-specific DNA binding	4.10E-03
30	GO:0004871: signal transducer activity	5.73E-03
31	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	6.18E-03
32	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	7.01E-03
33	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	7.74E-03
34	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	1.07E-02
35	GO:0000049: tRNA binding	1.07E-02
36	GO:0004672: protein kinase activity	1.14E-02
37	GO:0003725: double-stranded RNA binding	1.17E-02
38	GO:0043621: protein self-association	1.19E-02
39	GO:0004190: aspartic-type endopeptidase activity	1.38E-02
40	GO:0003712: transcription cofactor activity	1.38E-02
41	GO:0016298: lipase activity	1.53E-02
42	GO:0031418: L-ascorbic acid binding	1.60E-02
43	GO:0051087: chaperone binding	1.72E-02
44	GO:0005345: purine nucleobase transmembrane transporter activity	1.72E-02
45	GO:0010333: terpene synthase activity	1.84E-02
46	GO:0033612: receptor serine/threonine kinase binding	1.84E-02
47	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.96E-02
48	GO:0052689: carboxylic ester hydrolase activity	1.98E-02
49	GO:0003727: single-stranded RNA binding	2.22E-02
50	GO:0004812: aminoacyl-tRNA ligase activity	2.35E-02
51	GO:0004722: protein serine/threonine phosphatase activity	2.46E-02
52	GO:0003677: DNA binding	2.60E-02
53	GO:0004527: exonuclease activity	2.62E-02
54	GO:0005199: structural constituent of cell wall	2.62E-02
55	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	2.72E-02
56	GO:0016853: isomerase activity	2.76E-02
57	GO:0050662: coenzyme binding	2.76E-02
58	GO:0016762: xyloglucan:xyloglucosyl transferase activity	3.04E-02
59	GO:0051015: actin filament binding	3.33E-02
60	GO:0000156: phosphorelay response regulator activity	3.33E-02
61	GO:0016759: cellulose synthase activity	3.49E-02
62	GO:0016413: O-acetyltransferase activity	3.79E-02
63	GO:0016798: hydrolase activity, acting on glycosyl bonds	4.44E-02
64	GO:0102483: scopolin beta-glucosidase activity	4.44E-02
65	GO:0008236: serine-type peptidase activity	4.60E-02
66	GO:0005096: GTPase activator activity	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0043224: nuclear SCF ubiquitin ligase complex	0.00E+00
2	GO:0000791: euchromatin	3.04E-04
3	GO:0030870: Mre11 complex	6.66E-04
4	GO:0009531: secondary cell wall	1.55E-03
5	GO:0000795: synaptonemal complex	2.65E-03
6	GO:0005884: actin filament	9.71E-03
7	GO:0005634: nucleus	1.07E-02
8	GO:0030095: chloroplast photosystem II	1.27E-02
9	GO:0005875: microtubule associated complex	1.49E-02
10	GO:0009654: photosystem II oxygen evolving complex	1.72E-02
11	GO:0009532: plastid stroma	1.84E-02
12	GO:0005871: kinesin complex	2.35E-02
13	GO:0019898: extrinsic component of membrane	2.90E-02
14	GO:0009504: cell plate	2.90E-02
15	GO:0000785: chromatin	3.19E-02
16	GO:0030529: intracellular ribonucleoprotein complex	3.95E-02