Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G18250

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance0.00E+00
2GO:1900067: regulation of cellular response to alkaline pH0.00E+00
3GO:0090359: negative regulation of abscisic acid biosynthetic process0.00E+00
4GO:0015690: aluminum cation transport0.00E+00
5GO:1900367: positive regulation of defense response to insect0.00E+00
6GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
7GO:0002376: immune system process0.00E+00
8GO:0009312: oligosaccharide biosynthetic process0.00E+00
9GO:0046865: terpenoid transport0.00E+00
10GO:0010324: membrane invagination0.00E+00
11GO:0071327: cellular response to trehalose stimulus0.00E+00
12GO:0010055: atrichoblast differentiation0.00E+00
13GO:1902001: fatty acid transmembrane transport0.00E+00
14GO:0010112: regulation of systemic acquired resistance1.76E-08
15GO:0006979: response to oxidative stress1.31E-07
16GO:0006952: defense response2.13E-07
17GO:0009753: response to jasmonic acid5.21E-07
18GO:0071456: cellular response to hypoxia1.49E-06
19GO:0019725: cellular homeostasis1.13E-05
20GO:0080151: positive regulation of salicylic acid mediated signaling pathway1.13E-05
21GO:0009751: response to salicylic acid2.19E-05
22GO:0010150: leaf senescence3.63E-05
23GO:2000022: regulation of jasmonic acid mediated signaling pathway3.67E-05
24GO:0009611: response to wounding3.71E-05
25GO:0010186: positive regulation of cellular defense response3.81E-05
26GO:0010200: response to chitin4.32E-05
27GO:0009625: response to insect4.37E-05
28GO:0042391: regulation of membrane potential7.05E-05
29GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway7.23E-05
30GO:0051707: response to other organism1.14E-04
31GO:1903507: negative regulation of nucleic acid-templated transcription1.16E-04
32GO:0060548: negative regulation of cell death1.41E-04
33GO:0031347: regulation of defense response1.70E-04
34GO:0009643: photosynthetic acclimation3.06E-04
35GO:0019567: arabinose biosynthetic process5.06E-04
36GO:0080173: male-female gamete recognition during double fertilization5.06E-04
37GO:0033306: phytol metabolic process5.06E-04
38GO:0009700: indole phytoalexin biosynthetic process5.06E-04
39GO:1901183: positive regulation of camalexin biosynthetic process5.06E-04
40GO:0009270: response to humidity5.06E-04
41GO:0050691: regulation of defense response to virus by host5.06E-04
42GO:0034214: protein hexamerization5.06E-04
43GO:1990542: mitochondrial transmembrane transport5.06E-04
44GO:0032107: regulation of response to nutrient levels5.06E-04
45GO:0048508: embryonic meristem development5.06E-04
46GO:0015760: glucose-6-phosphate transport5.06E-04
47GO:0006012: galactose metabolic process5.31E-04
48GO:0030091: protein repair6.54E-04
49GO:0010120: camalexin biosynthetic process7.96E-04
50GO:2000031: regulation of salicylic acid mediated signaling pathway7.96E-04
51GO:0006098: pentose-phosphate shunt9.51E-04
52GO:0010193: response to ozone1.04E-03
53GO:0019521: D-gluconate metabolic process1.09E-03
54GO:0010115: regulation of abscisic acid biosynthetic process1.09E-03
55GO:0015908: fatty acid transport1.09E-03
56GO:0044419: interspecies interaction between organisms1.09E-03
57GO:0009945: radial axis specification1.09E-03
58GO:0010271: regulation of chlorophyll catabolic process1.09E-03
59GO:0015712: hexose phosphate transport1.09E-03
60GO:0051258: protein polymerization1.09E-03
61GO:0071668: plant-type cell wall assembly1.09E-03
62GO:0009446: putrescine biosynthetic process1.09E-03
63GO:0015914: phospholipid transport1.09E-03
64GO:0009838: abscission1.09E-03
65GO:0010618: aerenchyma formation1.09E-03
66GO:0006527: arginine catabolic process1.09E-03
67GO:0080181: lateral root branching1.09E-03
68GO:0055088: lipid homeostasis1.09E-03
69GO:0042742: defense response to bacterium1.12E-03
70GO:0009737: response to abscisic acid1.22E-03
71GO:0009617: response to bacterium1.51E-03
72GO:0009626: plant-type hypersensitive response1.73E-03
73GO:0015695: organic cation transport1.78E-03
74GO:0015714: phosphoenolpyruvate transport1.78E-03
75GO:0080168: abscisic acid transport1.78E-03
76GO:1900055: regulation of leaf senescence1.78E-03
77GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process1.78E-03
78GO:0006954: inflammatory response1.78E-03
79GO:0010498: proteasomal protein catabolic process1.78E-03
80GO:0034051: negative regulation of plant-type hypersensitive response1.78E-03
81GO:0043328: protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway1.78E-03
82GO:0080163: regulation of protein serine/threonine phosphatase activity1.78E-03
83GO:0035436: triose phosphate transmembrane transport1.78E-03
84GO:0045793: positive regulation of cell size1.78E-03
85GO:0015692: lead ion transport1.78E-03
86GO:0010731: protein glutathionylation2.58E-03
87GO:0015696: ammonium transport2.58E-03
88GO:0051289: protein homotetramerization2.58E-03
89GO:0010116: positive regulation of abscisic acid biosynthetic process2.58E-03
90GO:0048194: Golgi vesicle budding2.58E-03
91GO:2000377: regulation of reactive oxygen species metabolic process3.08E-03
92GO:0009867: jasmonic acid mediated signaling pathway3.15E-03
93GO:0050832: defense response to fungus3.24E-03
94GO:0072488: ammonium transmembrane transport3.48E-03
95GO:0033358: UDP-L-arabinose biosynthetic process3.48E-03
96GO:0015713: phosphoglycerate transport3.48E-03
97GO:0008295: spermidine biosynthetic process3.48E-03
98GO:0080142: regulation of salicylic acid biosynthetic process3.48E-03
99GO:0009694: jasmonic acid metabolic process3.48E-03
100GO:1901141: regulation of lignin biosynthetic process3.48E-03
101GO:0010109: regulation of photosynthesis3.48E-03
102GO:0045227: capsule polysaccharide biosynthetic process3.48E-03
103GO:0048638: regulation of developmental growth3.48E-03
104GO:0080167: response to karrikin3.49E-03
105GO:0031348: negative regulation of defense response4.09E-03
106GO:0009697: salicylic acid biosynthetic process4.46E-03
107GO:0034052: positive regulation of plant-type hypersensitive response4.46E-03
108GO:0009164: nucleoside catabolic process4.46E-03
109GO:0010225: response to UV-C4.46E-03
110GO:0009636: response to toxic substance5.07E-03
111GO:0033365: protein localization to organelle5.53E-03
112GO:0006596: polyamine biosynthetic process5.53E-03
113GO:0009117: nucleotide metabolic process5.53E-03
114GO:0006574: valine catabolic process5.53E-03
115GO:0009759: indole glucosinolate biosynthetic process5.53E-03
116GO:0010942: positive regulation of cell death5.53E-03
117GO:0010256: endomembrane system organization5.53E-03
118GO:0006468: protein phosphorylation5.78E-03
119GO:0007166: cell surface receptor signaling pathway5.92E-03
120GO:0009646: response to absence of light6.61E-03
121GO:0042372: phylloquinone biosynthetic process6.67E-03
122GO:0045926: negative regulation of growth6.67E-03
123GO:0009094: L-phenylalanine biosynthetic process6.67E-03
124GO:0009942: longitudinal axis specification6.67E-03
125GO:0010310: regulation of hydrogen peroxide metabolic process6.67E-03
126GO:0071446: cellular response to salicylic acid stimulus7.90E-03
127GO:1900056: negative regulation of leaf senescence7.90E-03
128GO:1900057: positive regulation of leaf senescence7.90E-03
129GO:0000122: negative regulation of transcription from RNA polymerase II promoter7.90E-03
130GO:0050829: defense response to Gram-negative bacterium7.90E-03
131GO:1902074: response to salt7.90E-03
132GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway7.90E-03
133GO:0043090: amino acid import7.90E-03
134GO:0009414: response to water deprivation8.47E-03
135GO:0009787: regulation of abscisic acid-activated signaling pathway9.20E-03
136GO:0009819: drought recovery9.20E-03
137GO:0043068: positive regulation of programmed cell death9.20E-03
138GO:0009624: response to nematode1.00E-02
139GO:0006997: nucleus organization1.06E-02
140GO:0010204: defense response signaling pathway, resistance gene-independent1.06E-02
141GO:0030968: endoplasmic reticulum unfolded protein response1.06E-02
142GO:0010208: pollen wall assembly1.06E-02
143GO:0009723: response to ethylene1.17E-02
144GO:0019432: triglyceride biosynthetic process1.20E-02
145GO:0046916: cellular transition metal ion homeostasis1.20E-02
146GO:0009835: fruit ripening1.20E-02
147GO:0009627: systemic acquired resistance1.24E-02
148GO:0006950: response to stress1.30E-02
149GO:0009638: phototropism1.35E-02
150GO:0090332: stomatal closure1.35E-02
151GO:0048268: clathrin coat assembly1.35E-02
152GO:0010380: regulation of chlorophyll biosynthetic process1.35E-02
153GO:1900426: positive regulation of defense response to bacterium1.35E-02
154GO:0019538: protein metabolic process1.51E-02
155GO:0009870: defense response signaling pathway, resistance gene-dependent1.51E-02
156GO:0006032: chitin catabolic process1.51E-02
157GO:0010311: lateral root formation1.52E-02
158GO:0009407: toxin catabolic process1.60E-02
159GO:0048527: lateral root development1.67E-02
160GO:0019684: photosynthesis, light reaction1.67E-02
161GO:0010119: regulation of stomatal movement1.67E-02
162GO:0009089: lysine biosynthetic process via diaminopimelate1.67E-02
163GO:0009682: induced systemic resistance1.67E-02
164GO:0072593: reactive oxygen species metabolic process1.67E-02
165GO:0048229: gametophyte development1.67E-02
166GO:0009684: indoleacetic acid biosynthetic process1.67E-02
167GO:0002213: defense response to insect1.84E-02
168GO:0010105: negative regulation of ethylene-activated signaling pathway1.84E-02
169GO:0000266: mitochondrial fission1.84E-02
170GO:0009785: blue light signaling pathway2.02E-02
171GO:0055046: microgametogenesis2.02E-02
172GO:0006887: exocytosis2.19E-02
173GO:0006897: endocytosis2.19E-02
174GO:0034605: cellular response to heat2.20E-02
175GO:0002237: response to molecule of bacterial origin2.20E-02
176GO:0009266: response to temperature stimulus2.20E-02
177GO:0042343: indole glucosinolate metabolic process2.38E-02
178GO:0046688: response to copper ion2.38E-02
179GO:0009225: nucleotide-sugar metabolic process2.38E-02
180GO:0006470: protein dephosphorylation2.39E-02
181GO:0000162: tryptophan biosynthetic process2.58E-02
182GO:0080147: root hair cell development2.77E-02
183GO:0006855: drug transmembrane transport2.77E-02
184GO:0006874: cellular calcium ion homeostasis2.98E-02
185GO:0006825: copper ion transport2.98E-02
186GO:0009269: response to desiccation3.18E-02
187GO:0016998: cell wall macromolecule catabolic process3.18E-02
188GO:0098542: defense response to other organism3.18E-02
189GO:0009693: ethylene biosynthetic process3.61E-02
190GO:0006970: response to osmotic stress3.82E-02
191GO:0009561: megagametogenesis3.83E-02
192GO:0070417: cellular response to cold4.06E-02
193GO:0016567: protein ubiquitination4.07E-02
194GO:0007165: signal transduction4.07E-02
195GO:0009409: response to cold4.17E-02
196GO:0042631: cellular response to water deprivation4.29E-02
197GO:0000271: polysaccharide biosynthetic process4.29E-02
198GO:0000413: protein peptidyl-prolyl isomerization4.29E-02
199GO:0045489: pectin biosynthetic process4.53E-02
200GO:0006520: cellular amino acid metabolic process4.53E-02
201GO:0009651: response to salt stress5.00E-02
RankGO TermAdjusted P value
1GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity0.00E+00
2GO:0080131: hydroxyjasmonate sulfotransferase activity0.00E+00
3GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
4GO:0005212: structural constituent of eye lens0.00E+00
5GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor0.00E+00
6GO:0030552: cAMP binding1.28E-05
7GO:0030553: cGMP binding1.28E-05
8GO:0005216: ion channel activity2.51E-05
9GO:0030551: cyclic nucleotide binding7.05E-05
10GO:0005249: voltage-gated potassium channel activity7.05E-05
11GO:0047631: ADP-ribose diphosphatase activity2.17E-04
12GO:0000210: NAD+ diphosphatase activity3.06E-04
13GO:0003714: transcription corepressor activity3.25E-04
14GO:0033743: peptide-methionine (R)-S-oxide reductase activity4.08E-04
15GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity4.08E-04
16GO:0004012: phospholipid-translocating ATPase activity4.08E-04
17GO:0003978: UDP-glucose 4-epimerase activity4.08E-04
18GO:0019707: protein-cysteine S-acyltransferase activity5.06E-04
19GO:2001147: camalexin binding5.06E-04
20GO:0008792: arginine decarboxylase activity5.06E-04
21GO:0015245: fatty acid transporter activity5.06E-04
22GO:0010285: L,L-diaminopimelate aminotransferase activity5.06E-04
23GO:2001227: quercitrin binding5.06E-04
24GO:0005544: calcium-dependent phospholipid binding6.54E-04
25GO:0019901: protein kinase binding9.55E-04
26GO:0015152: glucose-6-phosphate transmembrane transporter activity1.09E-03
27GO:0050403: trans-zeatin O-beta-D-glucosyltransferase activity1.09E-03
28GO:0050502: cis-zeatin O-beta-D-glucosyltransferase activity1.09E-03
29GO:0050736: O-malonyltransferase activity1.09E-03
30GO:0015036: disulfide oxidoreductase activity1.09E-03
31GO:0048531: beta-1,3-galactosyltransferase activity1.09E-03
32GO:0004385: guanylate kinase activity1.09E-03
33GO:0047364: desulfoglucosinolate sulfotransferase activity1.09E-03
34GO:0004568: chitinase activity1.31E-03
35GO:0005516: calmodulin binding1.57E-03
36GO:0016531: copper chaperone activity1.78E-03
37GO:0032403: protein complex binding1.78E-03
38GO:0071917: triose-phosphate transmembrane transporter activity1.78E-03
39GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity1.78E-03
40GO:0004324: ferredoxin-NADP+ reductase activity1.78E-03
41GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity1.78E-03
42GO:0008375: acetylglucosaminyltransferase activity1.91E-03
43GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.96E-03
44GO:0008146: sulfotransferase activity2.49E-03
45GO:0035529: NADH pyrophosphatase activity2.58E-03
46GO:0017077: oxidative phosphorylation uncoupler activity2.58E-03
47GO:0005509: calcium ion binding2.64E-03
48GO:0001046: core promoter sequence-specific DNA binding3.08E-03
49GO:0016301: kinase activity3.16E-03
50GO:0009916: alternative oxidase activity3.48E-03
51GO:0015120: phosphoglycerate transmembrane transporter activity3.48E-03
52GO:0050373: UDP-arabinose 4-epimerase activity3.48E-03
53GO:0047769: arogenate dehydratase activity3.48E-03
54GO:0004834: tryptophan synthase activity3.48E-03
55GO:0004737: pyruvate decarboxylase activity3.48E-03
56GO:0004664: prephenate dehydratase activity3.48E-03
57GO:0005496: steroid binding4.46E-03
58GO:0070696: transmembrane receptor protein serine/threonine kinase binding4.46E-03
59GO:0016757: transferase activity, transferring glycosyl groups4.80E-03
60GO:0004499: N,N-dimethylaniline monooxygenase activity4.86E-03
61GO:0008519: ammonium transmembrane transporter activity5.53E-03
62GO:0030976: thiamine pyrophosphate binding5.53E-03
63GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides6.67E-03
64GO:0003950: NAD+ ADP-ribosyltransferase activity6.67E-03
65GO:0005261: cation channel activity6.67E-03
66GO:0004144: diacylglycerol O-acyltransferase activity6.67E-03
67GO:0008113: peptide-methionine (S)-S-oxide reductase activity6.67E-03
68GO:0043565: sequence-specific DNA binding7.07E-03
69GO:0043295: glutathione binding7.90E-03
70GO:0016831: carboxy-lyase activity7.90E-03
71GO:0004034: aldose 1-epimerase activity9.20E-03
72GO:0004033: aldo-keto reductase (NADP) activity9.20E-03
73GO:0004714: transmembrane receptor protein tyrosine kinase activity9.20E-03
74GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity9.20E-03
75GO:0008483: transaminase activity9.82E-03
76GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity9.82E-03
77GO:0071949: FAD binding1.20E-02
78GO:0004806: triglyceride lipase activity1.30E-02
79GO:0004721: phosphoprotein phosphatase activity1.30E-02
80GO:0030247: polysaccharide binding1.30E-02
81GO:0004497: monooxygenase activity1.30E-02
82GO:0047617: acyl-CoA hydrolase activity1.35E-02
83GO:0004674: protein serine/threonine kinase activity1.36E-02
84GO:0015020: glucuronosyltransferase activity1.51E-02
85GO:0004864: protein phosphatase inhibitor activity1.51E-02
86GO:0008171: O-methyltransferase activity1.51E-02
87GO:0005545: 1-phosphatidylinositol binding1.51E-02
88GO:0030170: pyridoxal phosphate binding1.53E-02
89GO:0008559: xenobiotic-transporting ATPase activity1.67E-02
90GO:0004842: ubiquitin-protein transferase activity1.77E-02
91GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.85E-02
92GO:0004722: protein serine/threonine phosphatase activity1.96E-02
93GO:0005315: inorganic phosphate transmembrane transporter activity2.02E-02
94GO:0050661: NADP binding2.10E-02
95GO:0004364: glutathione transferase activity2.28E-02
96GO:0004970: ionotropic glutamate receptor activity2.38E-02
97GO:0005217: intracellular ligand-gated ion channel activity2.38E-02
98GO:0004190: aspartic-type endopeptidase activity2.38E-02
99GO:0016740: transferase activity2.62E-02
100GO:0051287: NAD binding2.87E-02
101GO:0019706: protein-cysteine S-palmitoyltransferase activity3.18E-02
102GO:0016298: lipase activity3.31E-02
103GO:0000287: magnesium ion binding3.40E-02
104GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity3.40E-02
105GO:0005199: structural constituent of cell wall4.53E-02
106GO:0030276: clathrin binding4.53E-02
107GO:0016853: isomerase activity4.76E-02
RankGO TermAdjusted P value
1GO:0019822: P4 peroxisome0.00E+00
2GO:0016021: integral component of membrane5.39E-07
3GO:0005886: plasma membrane1.44E-06
4GO:0005901: caveola1.13E-05
5GO:0005794: Golgi apparatus2.67E-04
6GO:0000138: Golgi trans cisterna5.06E-04
7GO:0031314: extrinsic component of mitochondrial inner membrane1.09E-03
8GO:0008287: protein serine/threonine phosphatase complex1.78E-03
9GO:0009530: primary cell wall1.78E-03
10GO:0005802: trans-Golgi network1.83E-03
11GO:0070062: extracellular exosome2.58E-03
12GO:0000813: ESCRT I complex4.46E-03
13GO:0000164: protein phosphatase type 1 complex4.46E-03
14GO:0016363: nuclear matrix6.67E-03
15GO:0005887: integral component of plasma membrane1.18E-02
16GO:0005768: endosome1.95E-02
17GO:0031012: extracellular matrix2.02E-02
18GO:0005578: proteinaceous extracellular matrix2.02E-02
19GO:0005743: mitochondrial inner membrane2.09E-02
20GO:0005777: peroxisome2.37E-02
21GO:0005795: Golgi stack2.38E-02
22GO:0005769: early endosome2.58E-02
23GO:0005758: mitochondrial intermembrane space2.77E-02
24GO:0070469: respiratory chain2.98E-02
25GO:0005741: mitochondrial outer membrane3.18E-02
26GO:0005905: clathrin-coated pit3.18E-02
27GO:0030136: clathrin-coated vesicle4.06E-02
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Gene type



Gene DE type