GO Enrichment Analysis of Co-expressed Genes with
AT3G18080
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006066: alcohol metabolic process | 0.00E+00 |
| 2 | GO:1905157: positive regulation of photosynthesis | 0.00E+00 |
| 3 | GO:0015995: chlorophyll biosynthetic process | 6.38E-05 |
| 4 | GO:0005982: starch metabolic process | 7.87E-05 |
| 5 | GO:0009090: homoserine biosynthetic process | 8.09E-05 |
| 6 | GO:0019276: UDP-N-acetylgalactosamine metabolic process | 8.09E-05 |
| 7 | GO:0010028: xanthophyll cycle | 8.09E-05 |
| 8 | GO:0034337: RNA folding | 8.09E-05 |
| 9 | GO:0006047: UDP-N-acetylglucosamine metabolic process | 8.09E-05 |
| 10 | GO:0010353: response to trehalose | 1.93E-04 |
| 11 | GO:0016122: xanthophyll metabolic process | 1.93E-04 |
| 12 | GO:0015804: neutral amino acid transport | 1.93E-04 |
| 13 | GO:0006898: receptor-mediated endocytosis | 1.93E-04 |
| 14 | GO:0006048: UDP-N-acetylglucosamine biosynthetic process | 3.24E-04 |
| 15 | GO:0009067: aspartate family amino acid biosynthetic process | 4.66E-04 |
| 16 | GO:1902358: sulfate transmembrane transport | 4.66E-04 |
| 17 | GO:0009152: purine ribonucleotide biosynthetic process | 4.66E-04 |
| 18 | GO:0046653: tetrahydrofolate metabolic process | 4.66E-04 |
| 19 | GO:0006662: glycerol ether metabolic process | 4.83E-04 |
| 20 | GO:0019252: starch biosynthetic process | 5.54E-04 |
| 21 | GO:0071483: cellular response to blue light | 6.21E-04 |
| 22 | GO:0010021: amylopectin biosynthetic process | 6.21E-04 |
| 23 | GO:0006109: regulation of carbohydrate metabolic process | 6.21E-04 |
| 24 | GO:0015994: chlorophyll metabolic process | 6.21E-04 |
| 25 | GO:0006656: phosphatidylcholine biosynthetic process | 7.86E-04 |
| 26 | GO:0009904: chloroplast accumulation movement | 7.86E-04 |
| 27 | GO:1902456: regulation of stomatal opening | 9.59E-04 |
| 28 | GO:0009643: photosynthetic acclimation | 9.59E-04 |
| 29 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 9.59E-04 |
| 30 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 9.59E-04 |
| 31 | GO:1901259: chloroplast rRNA processing | 1.14E-03 |
| 32 | GO:0009903: chloroplast avoidance movement | 1.14E-03 |
| 33 | GO:0009088: threonine biosynthetic process | 1.14E-03 |
| 34 | GO:0009610: response to symbiotic fungus | 1.34E-03 |
| 35 | GO:0009395: phospholipid catabolic process | 1.34E-03 |
| 36 | GO:0010196: nonphotochemical quenching | 1.34E-03 |
| 37 | GO:0008272: sulfate transport | 1.34E-03 |
| 38 | GO:0034599: cellular response to oxidative stress | 1.42E-03 |
| 39 | GO:0030091: protein repair | 1.54E-03 |
| 40 | GO:0005978: glycogen biosynthetic process | 1.54E-03 |
| 41 | GO:0009642: response to light intensity | 1.54E-03 |
| 42 | GO:0015996: chlorophyll catabolic process | 1.76E-03 |
| 43 | GO:0045454: cell redox homeostasis | 2.08E-03 |
| 44 | GO:0009086: methionine biosynthetic process | 2.22E-03 |
| 45 | GO:0009641: shade avoidance | 2.46E-03 |
| 46 | GO:0032259: methylation | 2.56E-03 |
| 47 | GO:0009089: lysine biosynthetic process via diaminopimelate | 2.71E-03 |
| 48 | GO:0043085: positive regulation of catalytic activity | 2.71E-03 |
| 49 | GO:0005983: starch catabolic process | 2.97E-03 |
| 50 | GO:0030048: actin filament-based movement | 3.24E-03 |
| 51 | GO:0018107: peptidyl-threonine phosphorylation | 3.24E-03 |
| 52 | GO:0007015: actin filament organization | 3.52E-03 |
| 53 | GO:0010223: secondary shoot formation | 3.52E-03 |
| 54 | GO:0016114: terpenoid biosynthetic process | 5.02E-03 |
| 55 | GO:0003333: amino acid transmembrane transport | 5.02E-03 |
| 56 | GO:0019748: secondary metabolic process | 5.34E-03 |
| 57 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 5.67E-03 |
| 58 | GO:0009741: response to brassinosteroid | 7.06E-03 |
| 59 | GO:0055114: oxidation-reduction process | 7.52E-03 |
| 60 | GO:0032502: developmental process | 8.56E-03 |
| 61 | GO:0009630: gravitropism | 8.56E-03 |
| 62 | GO:0009828: plant-type cell wall loosening | 9.34E-03 |
| 63 | GO:0006906: vesicle fusion | 1.14E-02 |
| 64 | GO:0015979: photosynthesis | 1.25E-02 |
| 65 | GO:0009813: flavonoid biosynthetic process | 1.32E-02 |
| 66 | GO:0009631: cold acclimation | 1.41E-02 |
| 67 | GO:0006865: amino acid transport | 1.46E-02 |
| 68 | GO:0009853: photorespiration | 1.51E-02 |
| 69 | GO:0006887: exocytosis | 1.70E-02 |
| 70 | GO:0006631: fatty acid metabolic process | 1.70E-02 |
| 71 | GO:0010114: response to red light | 1.80E-02 |
| 72 | GO:0009664: plant-type cell wall organization | 2.12E-02 |
| 73 | GO:0006813: potassium ion transport | 2.23E-02 |
| 74 | GO:0006364: rRNA processing | 2.23E-02 |
| 75 | GO:0010224: response to UV-B | 2.29E-02 |
| 76 | GO:0043086: negative regulation of catalytic activity | 2.51E-02 |
| 77 | GO:0009553: embryo sac development | 2.81E-02 |
| 78 | GO:0018105: peptidyl-serine phosphorylation | 2.93E-02 |
| 79 | GO:0035556: intracellular signal transduction | 3.03E-02 |
| 80 | GO:0009058: biosynthetic process | 3.49E-02 |
| 81 | GO:0009793: embryo development ending in seed dormancy | 3.91E-02 |
| 82 | GO:0016310: phosphorylation | 4.20E-02 |
| 83 | GO:0045490: pectin catabolic process | 4.23E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0052667: phosphomethylethanolamine N-methyltransferase activity | 0.00E+00 |
| 2 | GO:0046577: long-chain-alcohol oxidase activity | 0.00E+00 |
| 3 | GO:0050515: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity | 0.00E+00 |
| 4 | GO:0046422: violaxanthin de-epoxidase activity | 0.00E+00 |
| 5 | GO:0003977: UDP-N-acetylglucosamine diphosphorylase activity | 8.09E-05 |
| 6 | GO:0034256: chlorophyll(ide) b reductase activity | 8.09E-05 |
| 7 | GO:0045486: naringenin 3-dioxygenase activity | 8.09E-05 |
| 8 | GO:0052630: UDP-N-acetylgalactosamine diphosphorylase activity | 8.09E-05 |
| 9 | GO:0030794: (S)-coclaurine-N-methyltransferase activity | 8.09E-05 |
| 10 | GO:0050521: alpha-glucan, water dikinase activity | 8.09E-05 |
| 11 | GO:0003844: 1,4-alpha-glucan branching enzyme activity | 1.93E-04 |
| 12 | GO:0000234: phosphoethanolamine N-methyltransferase activity | 1.93E-04 |
| 13 | GO:0015172: acidic amino acid transmembrane transporter activity | 1.93E-04 |
| 14 | GO:0033201: alpha-1,4-glucan synthase activity | 1.93E-04 |
| 15 | GO:0004412: homoserine dehydrogenase activity | 1.93E-04 |
| 16 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 3.24E-04 |
| 17 | GO:0008864: formyltetrahydrofolate deformylase activity | 3.24E-04 |
| 18 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 3.24E-04 |
| 19 | GO:0043169: cation binding | 3.24E-04 |
| 20 | GO:0004373: glycogen (starch) synthase activity | 3.24E-04 |
| 21 | GO:0047134: protein-disulfide reductase activity | 4.15E-04 |
| 22 | GO:0016851: magnesium chelatase activity | 4.66E-04 |
| 23 | GO:0022890: inorganic cation transmembrane transporter activity | 4.66E-04 |
| 24 | GO:0004072: aspartate kinase activity | 4.66E-04 |
| 25 | GO:0019201: nucleotide kinase activity | 4.66E-04 |
| 26 | GO:0015175: neutral amino acid transmembrane transporter activity | 4.66E-04 |
| 27 | GO:0004791: thioredoxin-disulfide reductase activity | 5.19E-04 |
| 28 | GO:0009011: starch synthase activity | 6.21E-04 |
| 29 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 6.71E-04 |
| 30 | GO:0008200: ion channel inhibitor activity | 9.59E-04 |
| 31 | GO:0004017: adenylate kinase activity | 1.14E-03 |
| 32 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 1.14E-03 |
| 33 | GO:0003993: acid phosphatase activity | 1.42E-03 |
| 34 | GO:0008271: secondary active sulfate transmembrane transporter activity | 1.76E-03 |
| 35 | GO:0015293: symporter activity | 1.96E-03 |
| 36 | GO:0008047: enzyme activator activity | 2.46E-03 |
| 37 | GO:0047372: acylglycerol lipase activity | 2.71E-03 |
| 38 | GO:0015386: potassium:proton antiporter activity | 2.71E-03 |
| 39 | GO:0015116: sulfate transmembrane transporter activity | 2.97E-03 |
| 40 | GO:0015035: protein disulfide oxidoreductase activity | 3.40E-03 |
| 41 | GO:0003774: motor activity | 3.52E-03 |
| 42 | GO:0031418: L-ascorbic acid binding | 4.40E-03 |
| 43 | GO:0004857: enzyme inhibitor activity | 4.40E-03 |
| 44 | GO:0015079: potassium ion transmembrane transporter activity | 4.70E-03 |
| 45 | GO:0016779: nucleotidyltransferase activity | 5.34E-03 |
| 46 | GO:0030570: pectate lyase activity | 5.67E-03 |
| 47 | GO:0003756: protein disulfide isomerase activity | 6.01E-03 |
| 48 | GO:0015299: solute:proton antiporter activity | 7.42E-03 |
| 49 | GO:0008168: methyltransferase activity | 8.47E-03 |
| 50 | GO:0016597: amino acid binding | 1.02E-02 |
| 51 | GO:0008236: serine-type peptidase activity | 1.23E-02 |
| 52 | GO:0003746: translation elongation factor activity | 1.51E-02 |
| 53 | GO:0000149: SNARE binding | 1.60E-02 |
| 54 | GO:0050661: NADP binding | 1.65E-02 |
| 55 | GO:0005484: SNAP receptor activity | 1.80E-02 |
| 56 | GO:0004185: serine-type carboxypeptidase activity | 1.80E-02 |
| 57 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.91E-02 |
| 58 | GO:0015171: amino acid transmembrane transporter activity | 2.40E-02 |
| 59 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 2.57E-02 |
| 60 | GO:0019843: rRNA binding | 3.36E-02 |
| 61 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 3.43E-02 |
| 62 | GO:0016829: lyase activity | 3.56E-02 |
| 63 | GO:0016787: hydrolase activity | 3.56E-02 |
| 64 | GO:0004252: serine-type endopeptidase activity | 3.62E-02 |
| 65 | GO:0005524: ATP binding | 4.08E-02 |
| 66 | GO:0005525: GTP binding | 4.70E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 9.81E-11 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 2.54E-06 |
| 3 | GO:0009534: chloroplast thylakoid | 2.67E-06 |
| 4 | GO:0009501: amyloplast | 4.08E-05 |
| 5 | GO:0009570: chloroplast stroma | 1.23E-04 |
| 6 | GO:0042651: thylakoid membrane | 2.67E-04 |
| 7 | GO:0010007: magnesium chelatase complex | 3.24E-04 |
| 8 | GO:0009543: chloroplast thylakoid lumen | 4.94E-04 |
| 9 | GO:0031982: vesicle | 1.54E-03 |
| 10 | GO:0031977: thylakoid lumen | 1.61E-03 |
| 11 | GO:0031901: early endosome membrane | 1.98E-03 |
| 12 | GO:0016459: myosin complex | 2.46E-03 |
| 13 | GO:0009941: chloroplast envelope | 2.82E-03 |
| 14 | GO:0032040: small-subunit processome | 2.97E-03 |
| 15 | GO:0009706: chloroplast inner membrane | 3.31E-03 |
| 16 | GO:0030095: chloroplast photosystem II | 3.52E-03 |
| 17 | GO:0009654: photosystem II oxygen evolving complex | 4.70E-03 |
| 18 | GO:0019898: extrinsic component of membrane | 7.79E-03 |
| 19 | GO:0031969: chloroplast membrane | 1.09E-02 |
| 20 | GO:0031201: SNARE complex | 1.70E-02 |
| 21 | GO:0010287: plastoglobule | 3.24E-02 |
| 22 | GO:0005623: cell | 3.43E-02 |
| 23 | GO:0005759: mitochondrial matrix | 3.96E-02 |