GO Enrichment Analysis of Co-expressed Genes with
AT3G17840
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046486: glycerolipid metabolic process | 0.00E+00 |
| 2 | GO:0006907: pinocytosis | 0.00E+00 |
| 3 | GO:0070125: mitochondrial translational elongation | 0.00E+00 |
| 4 | GO:0010323: negative regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 0.00E+00 |
| 5 | GO:0000372: Group I intron splicing | 0.00E+00 |
| 6 | GO:0043489: RNA stabilization | 8.25E-05 |
| 7 | GO:0001736: establishment of planar polarity | 1.97E-04 |
| 8 | GO:0006650: glycerophospholipid metabolic process | 1.97E-04 |
| 9 | GO:0045910: negative regulation of DNA recombination | 3.29E-04 |
| 10 | GO:0046168: glycerol-3-phosphate catabolic process | 3.29E-04 |
| 11 | GO:0045017: glycerolipid biosynthetic process | 4.75E-04 |
| 12 | GO:0051513: regulation of monopolar cell growth | 4.75E-04 |
| 13 | GO:0010239: chloroplast mRNA processing | 4.75E-04 |
| 14 | GO:0007276: gamete generation | 4.75E-04 |
| 15 | GO:0006072: glycerol-3-phosphate metabolic process | 4.75E-04 |
| 16 | GO:0009958: positive gravitropism | 4.96E-04 |
| 17 | GO:0006021: inositol biosynthetic process | 6.32E-04 |
| 18 | GO:0016123: xanthophyll biosynthetic process | 8.00E-04 |
| 19 | GO:0016120: carotene biosynthetic process | 8.00E-04 |
| 20 | GO:0016554: cytidine to uridine editing | 9.77E-04 |
| 21 | GO:0060918: auxin transport | 9.77E-04 |
| 22 | GO:0042793: transcription from plastid promoter | 9.77E-04 |
| 23 | GO:0015995: chlorophyll biosynthetic process | 1.01E-03 |
| 24 | GO:0009942: longitudinal axis specification | 1.16E-03 |
| 25 | GO:0009658: chloroplast organization | 1.31E-03 |
| 26 | GO:0015693: magnesium ion transport | 1.36E-03 |
| 27 | GO:0006401: RNA catabolic process | 1.36E-03 |
| 28 | GO:0010492: maintenance of shoot apical meristem identity | 1.57E-03 |
| 29 | GO:0000105: histidine biosynthetic process | 1.57E-03 |
| 30 | GO:0051276: chromosome organization | 1.57E-03 |
| 31 | GO:0006402: mRNA catabolic process | 1.57E-03 |
| 32 | GO:0032544: plastid translation | 1.79E-03 |
| 33 | GO:0071482: cellular response to light stimulus | 1.79E-03 |
| 34 | GO:0019430: removal of superoxide radicals | 1.79E-03 |
| 35 | GO:0000373: Group II intron splicing | 2.02E-03 |
| 36 | GO:1900865: chloroplast RNA modification | 2.26E-03 |
| 37 | GO:0031425: chloroplast RNA processing | 2.26E-03 |
| 38 | GO:0006364: rRNA processing | 2.40E-03 |
| 39 | GO:0048829: root cap development | 2.51E-03 |
| 40 | GO:0006298: mismatch repair | 2.51E-03 |
| 41 | GO:0006782: protoporphyrinogen IX biosynthetic process | 2.51E-03 |
| 42 | GO:0006535: cysteine biosynthetic process from serine | 2.51E-03 |
| 43 | GO:0048765: root hair cell differentiation | 2.77E-03 |
| 44 | GO:0006397: mRNA processing | 2.96E-03 |
| 45 | GO:0006790: sulfur compound metabolic process | 3.03E-03 |
| 46 | GO:0010075: regulation of meristem growth | 3.31E-03 |
| 47 | GO:0009624: response to nematode | 3.40E-03 |
| 48 | GO:0009887: animal organ morphogenesis | 3.59E-03 |
| 49 | GO:0046854: phosphatidylinositol phosphorylation | 3.88E-03 |
| 50 | GO:0019344: cysteine biosynthetic process | 4.48E-03 |
| 51 | GO:0007010: cytoskeleton organization | 4.48E-03 |
| 52 | GO:0010073: meristem maintenance | 4.80E-03 |
| 53 | GO:0003333: amino acid transmembrane transport | 5.12E-03 |
| 54 | GO:0071215: cellular response to abscisic acid stimulus | 5.78E-03 |
| 55 | GO:0010082: regulation of root meristem growth | 5.78E-03 |
| 56 | GO:0045490: pectin catabolic process | 5.85E-03 |
| 57 | GO:0042127: regulation of cell proliferation | 6.13E-03 |
| 58 | GO:0016117: carotenoid biosynthetic process | 6.48E-03 |
| 59 | GO:0070417: cellular response to cold | 6.48E-03 |
| 60 | GO:0008033: tRNA processing | 6.83E-03 |
| 61 | GO:0007018: microtubule-based movement | 7.57E-03 |
| 62 | GO:0008654: phospholipid biosynthetic process | 7.95E-03 |
| 63 | GO:0006310: DNA recombination | 9.53E-03 |
| 64 | GO:0019760: glucosinolate metabolic process | 9.53E-03 |
| 65 | GO:0000910: cytokinesis | 1.04E-02 |
| 66 | GO:0016126: sterol biosynthetic process | 1.08E-02 |
| 67 | GO:0009793: embryo development ending in seed dormancy | 1.12E-02 |
| 68 | GO:0009627: systemic acquired resistance | 1.17E-02 |
| 69 | GO:0006974: cellular response to DNA damage stimulus | 1.17E-02 |
| 70 | GO:0000160: phosphorelay signal transduction system | 1.35E-02 |
| 71 | GO:0010311: lateral root formation | 1.35E-02 |
| 72 | GO:0009631: cold acclimation | 1.44E-02 |
| 73 | GO:0000724: double-strand break repair via homologous recombination | 1.49E-02 |
| 74 | GO:0006865: amino acid transport | 1.49E-02 |
| 75 | GO:0006839: mitochondrial transport | 1.69E-02 |
| 76 | GO:0030001: metal ion transport | 1.69E-02 |
| 77 | GO:0009926: auxin polar transport | 1.84E-02 |
| 78 | GO:0051707: response to other organism | 1.84E-02 |
| 79 | GO:0009965: leaf morphogenesis | 2.00E-02 |
| 80 | GO:0006260: DNA replication | 2.11E-02 |
| 81 | GO:0009736: cytokinin-activated signaling pathway | 2.28E-02 |
| 82 | GO:0009909: regulation of flower development | 2.45E-02 |
| 83 | GO:0006396: RNA processing | 2.99E-02 |
| 84 | GO:0016036: cellular response to phosphate starvation | 4.11E-02 |
| 85 | GO:0009451: RNA modification | 4.39E-02 |
| 86 | GO:0008380: RNA splicing | 4.89E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0047793: cycloeucalenol cycloisomerase activity | 0.00E+00 |
| 2 | GO:0052834: inositol monophosphate phosphatase activity | 0.00E+00 |
| 3 | GO:0004401: histidinol-phosphatase activity | 0.00E+00 |
| 4 | GO:0004654: polyribonucleotide nucleotidyltransferase activity | 8.25E-05 |
| 5 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 8.25E-05 |
| 6 | GO:0050017: L-3-cyanoalanine synthase activity | 1.97E-04 |
| 7 | GO:0052832: inositol monophosphate 3-phosphatase activity | 1.97E-04 |
| 8 | GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity | 1.97E-04 |
| 9 | GO:0004109: coproporphyrinogen oxidase activity | 1.97E-04 |
| 10 | GO:0008934: inositol monophosphate 1-phosphatase activity | 1.97E-04 |
| 11 | GO:0052833: inositol monophosphate 4-phosphatase activity | 1.97E-04 |
| 12 | GO:0003723: RNA binding | 2.29E-04 |
| 13 | GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity | 3.29E-04 |
| 14 | GO:0030570: pectate lyase activity | 3.63E-04 |
| 15 | GO:0010011: auxin binding | 6.32E-04 |
| 16 | GO:0010328: auxin influx transmembrane transporter activity | 6.32E-04 |
| 17 | GO:0070696: transmembrane receptor protein serine/threonine kinase binding | 8.00E-04 |
| 18 | GO:0009378: four-way junction helicase activity | 9.77E-04 |
| 19 | GO:0030983: mismatched DNA binding | 9.77E-04 |
| 20 | GO:0043140: ATP-dependent 3'-5' DNA helicase activity | 9.77E-04 |
| 21 | GO:0004784: superoxide dismutase activity | 9.77E-04 |
| 22 | GO:0004656: procollagen-proline 4-dioxygenase activity | 1.16E-03 |
| 23 | GO:0019900: kinase binding | 1.16E-03 |
| 24 | GO:0004124: cysteine synthase activity | 1.16E-03 |
| 25 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 1.16E-03 |
| 26 | GO:0043138: 3'-5' DNA helicase activity | 1.16E-03 |
| 27 | GO:0004519: endonuclease activity | 3.12E-03 |
| 28 | GO:0003779: actin binding | 3.30E-03 |
| 29 | GO:0015095: magnesium ion transmembrane transporter activity | 3.31E-03 |
| 30 | GO:0031072: heat shock protein binding | 3.31E-03 |
| 31 | GO:0000175: 3'-5'-exoribonuclease activity | 3.31E-03 |
| 32 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 3.59E-03 |
| 33 | GO:0008266: poly(U) RNA binding | 3.59E-03 |
| 34 | GO:0031418: L-ascorbic acid binding | 4.48E-03 |
| 35 | GO:0016829: lyase activity | 4.59E-03 |
| 36 | GO:0033612: receptor serine/threonine kinase binding | 5.12E-03 |
| 37 | GO:0003756: protein disulfide isomerase activity | 6.13E-03 |
| 38 | GO:0010181: FMN binding | 7.57E-03 |
| 39 | GO:0000156: phosphorelay response regulator activity | 9.12E-03 |
| 40 | GO:0003684: damaged DNA binding | 9.53E-03 |
| 41 | GO:0005096: GTPase activator activity | 1.35E-02 |
| 42 | GO:0003746: translation elongation factor activity | 1.54E-02 |
| 43 | GO:0003697: single-stranded DNA binding | 1.54E-02 |
| 44 | GO:0015293: symporter activity | 2.00E-02 |
| 45 | GO:0051287: NAD binding | 2.11E-02 |
| 46 | GO:0003690: double-stranded DNA binding | 2.33E-02 |
| 47 | GO:0003729: mRNA binding | 2.34E-02 |
| 48 | GO:0003777: microtubule motor activity | 2.45E-02 |
| 49 | GO:0015171: amino acid transmembrane transporter activity | 2.45E-02 |
| 50 | GO:0016887: ATPase activity | 2.58E-02 |
| 51 | GO:0051082: unfolded protein binding | 2.93E-02 |
| 52 | GO:0015035: protein disulfide oxidoreductase activity | 2.99E-02 |
| 53 | GO:0008026: ATP-dependent helicase activity | 3.05E-02 |
| 54 | GO:0019843: rRNA binding | 3.43E-02 |
| 55 | GO:0030170: pyridoxal phosphate binding | 3.70E-02 |
| 56 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 3.89E-02 |
| 57 | GO:0008017: microtubule binding | 4.46E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009537: proplastid | 0.00E+00 |
| 2 | GO:0009295: nucleoid | 4.31E-05 |
| 3 | GO:0009507: chloroplast | 1.19E-04 |
| 4 | GO:0009508: plastid chromosome | 1.54E-04 |
| 5 | GO:0009513: etioplast | 1.97E-04 |
| 6 | GO:0009941: chloroplast envelope | 2.24E-04 |
| 7 | GO:0009509: chromoplast | 3.29E-04 |
| 8 | GO:0042646: plastid nucleoid | 4.75E-04 |
| 9 | GO:0009331: glycerol-3-phosphate dehydrogenase complex | 4.75E-04 |
| 10 | GO:0030529: intracellular ribonucleoprotein complex | 8.68E-04 |
| 11 | GO:0009986: cell surface | 1.36E-03 |
| 12 | GO:0009501: amyloplast | 1.57E-03 |
| 13 | GO:0009570: chloroplast stroma | 1.76E-03 |
| 14 | GO:0042644: chloroplast nucleoid | 2.02E-03 |
| 15 | GO:0009532: plastid stroma | 5.12E-03 |
| 16 | GO:0005871: kinesin complex | 6.48E-03 |
| 17 | GO:0009534: chloroplast thylakoid | 7.36E-03 |
| 18 | GO:0005694: chromosome | 8.73E-03 |
| 19 | GO:0031225: anchored component of membrane | 1.02E-02 |
| 20 | GO:0009707: chloroplast outer membrane | 1.30E-02 |
| 21 | GO:0009579: thylakoid | 3.53E-02 |
| 22 | GO:0005759: mitochondrial matrix | 4.04E-02 |