co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G17790

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0072722: response to amitrole	0.00E+00
2	GO:0052386: cell wall thickening	0.00E+00
3	GO:0043619: regulation of transcription from RNA polymerase II promoter in response to oxidative stress	0.00E+00
4	GO:0090400: stress-induced premature senescence	0.00E+00
5	GO:0051553: flavone biosynthetic process	0.00E+00
6	GO:1904250: positive regulation of age-related resistance	0.00E+00
7	GO:2000068: regulation of defense response to insect	0.00E+00
8	GO:0051607: defense response to virus	1.68E-05
9	GO:0009620: response to fungus	1.96E-05
10	GO:0009636: response to toxic substance	1.03E-04
11	GO:0009617: response to bacterium	1.22E-04
12	GO:0071669: plant-type cell wall organization or biogenesis	1.31E-04
13	GO:0006102: isocitrate metabolic process	1.67E-04
14	GO:1990641: response to iron ion starvation	2.02E-04
15	GO:0019567: arabinose biosynthetic process	2.02E-04
16	GO:0019478: D-amino acid catabolic process	2.02E-04
17	GO:0046246: terpene biosynthetic process	2.02E-04
18	GO:0051090: regulation of sequence-specific DNA binding transcription factor activity	2.02E-04
19	GO:0006680: glucosylceramide catabolic process	2.02E-04
20	GO:0006568: tryptophan metabolic process	4.52E-04
21	GO:0042853: L-alanine catabolic process	4.52E-04
22	GO:0006101: citrate metabolic process	4.52E-04
23	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	4.52E-04
24	GO:0006099: tricarboxylic acid cycle	6.10E-04
25	GO:0032504: multicellular organism reproduction	7.36E-04
26	GO:0010476: gibberellin mediated signaling pathway	7.36E-04
27	GO:0010325: raffinose family oligosaccharide biosynthetic process	7.36E-04
28	GO:0009410: response to xenobiotic stimulus	7.36E-04
29	GO:0010272: response to silver ion	7.36E-04
30	GO:0051091: positive regulation of sequence-specific DNA binding transcription factor activity	7.36E-04
31	GO:0006556: S-adenosylmethionine biosynthetic process	7.36E-04
32	GO:0061158: 3'-UTR-mediated mRNA destabilization	7.36E-04
33	GO:0071398: cellular response to fatty acid	7.36E-04
34	GO:0000162: tryptophan biosynthetic process	7.47E-04
35	GO:0070301: cellular response to hydrogen peroxide	1.05E-03
36	GO:0002239: response to oomycetes	1.05E-03
37	GO:0009963: positive regulation of flavonoid biosynthetic process	1.05E-03
38	GO:0071323: cellular response to chitin	1.05E-03
39	GO:0080024: indolebutyric acid metabolic process	1.05E-03
40	GO:0001676: long-chain fatty acid metabolic process	1.05E-03
41	GO:0009693: ethylene biosynthetic process	1.18E-03
42	GO:0046686: response to cadmium ion	1.19E-03
43	GO:0009939: positive regulation of gibberellic acid mediated signaling pathway	1.40E-03
44	GO:1902584: positive regulation of response to water deprivation	1.40E-03
45	GO:0006621: protein retention in ER lumen	1.40E-03
46	GO:0033356: UDP-L-arabinose metabolic process	1.40E-03
47	GO:1901002: positive regulation of response to salt stress	1.40E-03
48	GO:0015867: ATP transport	1.40E-03
49	GO:0010188: response to microbial phytotoxin	1.40E-03
50	GO:0045927: positive regulation of growth	1.78E-03
51	GO:0006564: L-serine biosynthetic process	1.78E-03
52	GO:0006097: glyoxylate cycle	1.78E-03
53	GO:0006623: protein targeting to vacuole	1.85E-03
54	GO:0010193: response to ozone	1.98E-03
55	GO:0009651: response to salt stress	2.17E-03
56	GO:0015866: ADP transport	2.19E-03
57	GO:0006014: D-ribose metabolic process	2.19E-03
58	GO:0009759: indole glucosinolate biosynthetic process	2.19E-03
59	GO:0055114: oxidation-reduction process	2.53E-03
60	GO:0034389: lipid particle organization	2.63E-03
61	GO:0009082: branched-chain amino acid biosynthetic process	2.63E-03
62	GO:0009099: valine biosynthetic process	2.63E-03
63	GO:0080113: regulation of seed growth	2.63E-03
64	GO:0048444: floral organ morphogenesis	2.63E-03
65	GO:0009751: response to salicylic acid	2.90E-03
66	GO:0009816: defense response to bacterium, incompatible interaction	3.01E-03
67	GO:0080186: developmental vegetative growth	3.09E-03
68	GO:0050829: defense response to Gram-negative bacterium	3.09E-03
69	GO:1900057: positive regulation of leaf senescence	3.09E-03
70	GO:1902074: response to salt	3.09E-03
71	GO:0010044: response to aluminum ion	3.09E-03
72	GO:0010150: leaf senescence	3.58E-03
73	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	3.59E-03
74	GO:0009819: drought recovery	3.59E-03
75	GO:0043068: positive regulation of programmed cell death	3.59E-03
76	GO:0006605: protein targeting	3.59E-03
77	GO:0009817: defense response to fungus, incompatible interaction	3.71E-03
78	GO:0006002: fructose 6-phosphate metabolic process	4.10E-03
79	GO:0010417: glucuronoxylan biosynthetic process	4.10E-03
80	GO:0009097: isoleucine biosynthetic process	4.10E-03
81	GO:0009835: fruit ripening	4.65E-03
82	GO:0009056: catabolic process	4.65E-03
83	GO:0009098: leucine biosynthetic process	5.21E-03
84	GO:0008202: steroid metabolic process	5.21E-03
85	GO:0006631: fatty acid metabolic process	5.57E-03
86	GO:0006032: chitin catabolic process	5.80E-03
87	GO:0042542: response to hydrogen peroxide	5.80E-03
88	GO:0042742: defense response to bacterium	5.96E-03
89	GO:0051707: response to other organism	6.04E-03
90	GO:0006415: translational termination	6.41E-03
91	GO:0000272: polysaccharide catabolic process	6.41E-03
92	GO:0071365: cellular response to auxin stimulus	7.04E-03
93	GO:0009611: response to wounding	7.33E-03
94	GO:0015031: protein transport	9.05E-03
95	GO:0010053: root epidermal cell differentiation	9.07E-03
96	GO:0090351: seedling development	9.07E-03
97	GO:0044550: secondary metabolite biosynthetic process	9.10E-03
98	GO:0034976: response to endoplasmic reticulum stress	9.79E-03
99	GO:0006457: protein folding	1.05E-02
100	GO:0009863: salicylic acid mediated signaling pathway	1.05E-02
101	GO:0030150: protein import into mitochondrial matrix	1.05E-02
102	GO:0006886: intracellular protein transport	1.07E-02
103	GO:0051302: regulation of cell division	1.13E-02
104	GO:0006874: cellular calcium ion homeostasis	1.13E-02
105	GO:0019915: lipid storage	1.21E-02
106	GO:0009269: response to desiccation	1.21E-02
107	GO:0016114: terpenoid biosynthetic process	1.21E-02
108	GO:0016998: cell wall macromolecule catabolic process	1.21E-02
109	GO:0030245: cellulose catabolic process	1.29E-02
110	GO:0009814: defense response, incompatible interaction	1.29E-02
111	GO:0016226: iron-sulfur cluster assembly	1.29E-02
112	GO:0006730: one-carbon metabolic process	1.29E-02
113	GO:0030433: ubiquitin-dependent ERAD pathway	1.29E-02
114	GO:0031348: negative regulation of defense response	1.29E-02
115	GO:0009411: response to UV	1.37E-02
116	GO:0010051: xylem and phloem pattern formation	1.62E-02
117	GO:0045489: pectin biosynthetic process	1.71E-02
118	GO:0006662: glycerol ether metabolic process	1.71E-02
119	GO:0048544: recognition of pollen	1.80E-02
120	GO:0019252: starch biosynthetic process	1.89E-02
121	GO:0007275: multicellular organism development	1.92E-02
122	GO:0002229: defense response to oomycetes	1.99E-02
123	GO:0000302: response to reactive oxygen species	1.99E-02
124	GO:0006891: intra-Golgi vesicle-mediated transport	1.99E-02
125	GO:0006635: fatty acid beta-oxidation	1.99E-02
126	GO:0006979: response to oxidative stress	2.08E-02
127	GO:0016032: viral process	2.08E-02
128	GO:0071281: cellular response to iron ion	2.18E-02
129	GO:0019760: glucosinolate metabolic process	2.28E-02
130	GO:0006464: cellular protein modification process	2.28E-02
131	GO:0001666: response to hypoxia	2.58E-02
132	GO:0009615: response to virus	2.58E-02
133	GO:0009607: response to biotic stimulus	2.69E-02
134	GO:0010029: regulation of seed germination	2.69E-02
135	GO:0009627: systemic acquired resistance	2.80E-02
136	GO:0016311: dephosphorylation	3.01E-02
137	GO:0030244: cellulose biosynthetic process	3.12E-02
138	GO:0008219: cell death	3.12E-02
139	GO:0009813: flavonoid biosynthetic process	3.23E-02
140	GO:0009832: plant-type cell wall biogenesis	3.23E-02
141	GO:0009407: toxin catabolic process	3.35E-02
142	GO:0006970: response to osmotic stress	3.35E-02
143	GO:0048527: lateral root development	3.46E-02
144	GO:0010043: response to zinc ion	3.46E-02
145	GO:0009867: jasmonic acid mediated signaling pathway	3.69E-02
146	GO:0045087: innate immune response	3.69E-02
147	GO:0016051: carbohydrate biosynthetic process	3.69E-02
148	GO:0034599: cellular response to oxidative stress	3.81E-02
149	GO:0006839: mitochondrial transport	4.05E-02
150	GO:0016192: vesicle-mediated transport	4.06E-02
151	GO:0045454: cell redox homeostasis	4.61E-02
152	GO:0009965: leaf morphogenesis	4.80E-02
153	GO:0006855: drug transmembrane transport	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0033759: flavone synthase activity	0.00E+00
2	GO:0097007: 4,8,12-trimethyltrideca-1,3,7,11-tetraene synthase activity	0.00E+00
3	GO:0052684: L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity	0.00E+00
4	GO:0005046: KDEL sequence binding	0.00E+00
5	GO:0097008: (3E)-4,8-dimethyl-1,3,7-nonatriene synthase activity	0.00E+00
6	GO:0051499: D-aminoacyl-tRNA deacylase activity	0.00E+00
7	GO:0102391: decanoate--CoA ligase activity	9.88E-05
8	GO:0004467: long-chain fatty acid-CoA ligase activity	1.31E-04
9	GO:0010179: IAA-Ala conjugate hydrolase activity	2.02E-04
10	GO:0004425: indole-3-glycerol-phosphate synthase activity	2.02E-04
11	GO:0070401: NADP+ binding	2.02E-04
12	GO:0004348: glucosylceramidase activity	2.02E-04
13	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	2.02E-04
14	GO:0016229: steroid dehydrogenase activity	2.02E-04
15	GO:0004630: phospholipase D activity	2.08E-04
16	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	2.08E-04
17	GO:0004617: phosphoglycerate dehydrogenase activity	4.52E-04
18	GO:0003994: aconitate hydratase activity	4.52E-04
19	GO:0000774: adenyl-nucleotide exchange factor activity	4.52E-04
20	GO:0052691: UDP-arabinopyranose mutase activity	4.52E-04
21	GO:1990585: hydroxyproline O-arabinosyltransferase activity	4.52E-04
22	GO:0050736: O-malonyltransferase activity	4.52E-04
23	GO:0010331: gibberellin binding	4.52E-04
24	GO:0042803: protein homodimerization activity	4.75E-04
25	GO:0008061: chitin binding	6.71E-04
26	GO:0004478: methionine adenosyltransferase activity	7.36E-04
27	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	7.36E-04
28	GO:0031418: L-ascorbic acid binding	8.26E-04
29	GO:0052655: L-valine transaminase activity	1.05E-03
30	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	1.05E-03
31	GO:0004449: isocitrate dehydrogenase (NAD+) activity	1.05E-03
32	GO:0016149: translation release factor activity, codon specific	1.05E-03
33	GO:0008106: alcohol dehydrogenase (NADP+) activity	1.05E-03
34	GO:0016656: monodehydroascorbate reductase (NADH) activity	1.05E-03
35	GO:0052656: L-isoleucine transaminase activity	1.05E-03
36	GO:0052654: L-leucine transaminase activity	1.05E-03
37	GO:0008810: cellulase activity	1.18E-03
38	GO:0004834: tryptophan synthase activity	1.40E-03
39	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.40E-03
40	GO:0015369: calcium:proton antiporter activity	1.40E-03
41	GO:0046923: ER retention sequence binding	1.40E-03
42	GO:0004084: branched-chain-amino-acid transaminase activity	1.40E-03
43	GO:0016866: intramolecular transferase activity	1.40E-03
44	GO:0015368: calcium:cation antiporter activity	1.40E-03
45	GO:0005506: iron ion binding	1.60E-03
46	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	1.78E-03
47	GO:0004040: amidase activity	1.78E-03
48	GO:0018685: alkane 1-monooxygenase activity	1.78E-03
49	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	2.46E-03
50	GO:0015217: ADP transmembrane transporter activity	2.63E-03
51	GO:0004747: ribokinase activity	2.63E-03
52	GO:0005347: ATP transmembrane transporter activity	2.63E-03
53	GO:0004656: procollagen-proline 4-dioxygenase activity	2.63E-03
54	GO:0003872: 6-phosphofructokinase activity	3.09E-03
55	GO:0008320: protein transmembrane transporter activity	3.09E-03
56	GO:0019825: oxygen binding	3.22E-03
57	GO:0004033: aldo-keto reductase (NADP) activity	3.59E-03
58	GO:0052747: sinapyl alcohol dehydrogenase activity	3.59E-03
59	GO:0008865: fructokinase activity	3.59E-03
60	GO:0015491: cation:cation antiporter activity	3.59E-03
61	GO:0008142: oxysterol binding	4.10E-03
62	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	4.65E-03
63	GO:0003747: translation release factor activity	4.65E-03
64	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	4.69E-03
65	GO:0051539: 4 iron, 4 sulfur cluster binding	5.34E-03
66	GO:0004568: chitinase activity	5.80E-03
67	GO:0005198: structural molecule activity	6.78E-03
68	GO:0005524: ATP binding	6.78E-03
69	GO:0045551: cinnamyl-alcohol dehydrogenase activity	7.04E-03
70	GO:0003712: transcription cofactor activity	9.07E-03
71	GO:0005217: intracellular ligand-gated ion channel activity	9.07E-03
72	GO:0004970: ionotropic glutamate receptor activity	9.07E-03
73	GO:0051536: iron-sulfur cluster binding	1.05E-02
74	GO:0051087: chaperone binding	1.13E-02
75	GO:0051082: unfolded protein binding	1.16E-02
76	GO:0015035: protein disulfide oxidoreductase activity	1.20E-02
77	GO:0005507: copper ion binding	1.21E-02
78	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.29E-02
79	GO:0020037: heme binding	1.32E-02
80	GO:0003756: protein disulfide isomerase activity	1.45E-02
81	GO:0003727: single-stranded RNA binding	1.45E-02
82	GO:0005102: receptor binding	1.54E-02
83	GO:0047134: protein-disulfide reductase activity	1.54E-02
84	GO:0030170: pyridoxal phosphate binding	1.62E-02
85	GO:0004791: thioredoxin-disulfide reductase activity	1.80E-02
86	GO:0010181: FMN binding	1.80E-02
87	GO:0004872: receptor activity	1.89E-02
88	GO:0015297: antiporter activity	1.92E-02
89	GO:0005515: protein binding	2.07E-02
90	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.18E-02
91	GO:0005215: transporter activity	2.38E-02
92	GO:0008237: metallopeptidase activity	2.38E-02
93	GO:0016597: amino acid binding	2.48E-02
94	GO:0004806: triglyceride lipase activity	2.90E-02
95	GO:0030247: polysaccharide binding	2.90E-02
96	GO:0015238: drug transmembrane transporter activity	3.23E-02
97	GO:0050660: flavin adenine dinucleotide binding	3.60E-02
98	GO:0003746: translation elongation factor activity	3.69E-02
99	GO:0003993: acid phosphatase activity	3.81E-02
100	GO:0043565: sequence-specific DNA binding	3.86E-02
101	GO:0004497: monooxygenase activity	3.86E-02
102	GO:0004712: protein serine/threonine/tyrosine kinase activity	3.93E-02
103	GO:0004364: glutathione transferase activity	4.30E-02
104	GO:0035091: phosphatidylinositol binding	4.68E-02
105	GO:0004871: signal transducer activity	4.82E-02
106	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0005789: endoplasmic reticulum membrane	1.86E-06
2	GO:0016021: integral component of membrane	3.56E-06
3	GO:0017119: Golgi transport complex	1.09E-05
4	GO:0005801: cis-Golgi network	9.88E-05
5	GO:0005794: Golgi apparatus	1.32E-04
6	GO:0005886: plasma membrane	1.52E-04
7	GO:0045252: oxoglutarate dehydrogenase complex	2.02E-04
8	GO:0001405: presequence translocase-associated import motor	2.02E-04
9	GO:0005783: endoplasmic reticulum	2.37E-04
10	GO:0005829: cytosol	3.79E-04
11	GO:0030134: ER to Golgi transport vesicle	4.52E-04
12	GO:0030658: transport vesicle membrane	1.05E-03
13	GO:0005945: 6-phosphofructokinase complex	1.78E-03
14	GO:0009506: plasmodesma	1.85E-03
15	GO:0005774: vacuolar membrane	2.34E-03
16	GO:0005788: endoplasmic reticulum lumen	3.01E-03
17	GO:0005779: integral component of peroxisomal membrane	4.10E-03
18	GO:0005811: lipid particle	4.10E-03
19	GO:0016020: membrane	4.47E-03
20	GO:0046658: anchored component of plasma membrane	5.10E-03
21	GO:0030665: clathrin-coated vesicle membrane	5.21E-03
22	GO:0031902: late endosome membrane	5.57E-03
23	GO:0031410: cytoplasmic vesicle	1.29E-02
24	GO:0005802: trans-Golgi network	1.45E-02
25	GO:0005623: cell	1.50E-02
26	GO:0005773: vacuole	1.67E-02
27	GO:0005768: endosome	1.75E-02
28	GO:0019898: extrinsic component of membrane	1.89E-02
29	GO:0031965: nuclear membrane	1.89E-02
30	GO:0009705: plant-type vacuole membrane	2.01E-02
31	GO:0016592: mediator complex	2.08E-02
32	GO:0071944: cell periphery	2.18E-02
33	GO:0009505: plant-type cell wall	2.87E-02
34	GO:0000151: ubiquitin ligase complex	3.12E-02
35	GO:0000325: plant-type vacuole	3.46E-02
36	GO:0005737: cytoplasm	4.73E-02
37	GO:0031225: anchored component of membrane	4.78E-02