GO Enrichment Analysis of Co-expressed Genes with
AT3G17210
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000455: enzyme-directed rRNA pseudouridine synthesis | 0.00E+00 |
| 2 | GO:0000488: maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | 0.00E+00 |
| 3 | GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process | 0.00E+00 |
| 4 | GO:0070125: mitochondrial translational elongation | 0.00E+00 |
| 5 | GO:0070979: protein K11-linked ubiquitination | 0.00E+00 |
| 6 | GO:0090071: negative regulation of ribosome biogenesis | 0.00E+00 |
| 7 | GO:0000489: maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | 0.00E+00 |
| 8 | GO:0006573: valine metabolic process | 0.00E+00 |
| 9 | GO:0016123: xanthophyll biosynthetic process | 5.43E-06 |
| 10 | GO:0016117: carotenoid biosynthetic process | 6.36E-06 |
| 11 | GO:0006551: leucine metabolic process | 5.48E-05 |
| 12 | GO:0048363: mucilage pectin metabolic process | 5.48E-05 |
| 13 | GO:1900871: chloroplast mRNA modification | 1.34E-04 |
| 14 | GO:0071668: plant-type cell wall assembly | 1.34E-04 |
| 15 | GO:0001682: tRNA 5'-leader removal | 1.34E-04 |
| 16 | GO:0031145: anaphase-promoting complex-dependent catabolic process | 2.28E-04 |
| 17 | GO:0006696: ergosterol biosynthetic process | 2.28E-04 |
| 18 | GO:0008033: tRNA processing | 2.70E-04 |
| 19 | GO:0030071: regulation of mitotic metaphase/anaphase transition | 3.33E-04 |
| 20 | GO:0010239: chloroplast mRNA processing | 3.33E-04 |
| 21 | GO:0042989: sequestering of actin monomers | 3.33E-04 |
| 22 | GO:0009451: RNA modification | 3.99E-04 |
| 23 | GO:0008295: spermidine biosynthetic process | 4.45E-04 |
| 24 | GO:0030041: actin filament polymerization | 5.66E-04 |
| 25 | GO:0032876: negative regulation of DNA endoreduplication | 5.66E-04 |
| 26 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 6.92E-04 |
| 27 | GO:0042372: phylloquinone biosynthetic process | 8.25E-04 |
| 28 | GO:0009082: branched-chain amino acid biosynthetic process | 8.25E-04 |
| 29 | GO:0017148: negative regulation of translation | 8.25E-04 |
| 30 | GO:0009099: valine biosynthetic process | 8.25E-04 |
| 31 | GO:0051510: regulation of unidimensional cell growth | 9.62E-04 |
| 32 | GO:0032875: regulation of DNA endoreduplication | 1.11E-03 |
| 33 | GO:0000105: histidine biosynthetic process | 1.11E-03 |
| 34 | GO:0009231: riboflavin biosynthetic process | 1.11E-03 |
| 35 | GO:0009793: embryo development ending in seed dormancy | 1.12E-03 |
| 36 | GO:0009097: isoleucine biosynthetic process | 1.26E-03 |
| 37 | GO:0032544: plastid translation | 1.26E-03 |
| 38 | GO:0071482: cellular response to light stimulus | 1.26E-03 |
| 39 | GO:0048507: meristem development | 1.41E-03 |
| 40 | GO:0048354: mucilage biosynthetic process involved in seed coat development | 1.58E-03 |
| 41 | GO:0009691: cytokinin biosynthetic process | 2.30E-03 |
| 42 | GO:0046686: response to cadmium ion | 2.70E-03 |
| 43 | GO:0090351: seedling development | 2.70E-03 |
| 44 | GO:0000162: tryptophan biosynthetic process | 2.90E-03 |
| 45 | GO:0007010: cytoskeleton organization | 3.11E-03 |
| 46 | GO:0008299: isoprenoid biosynthetic process | 3.32E-03 |
| 47 | GO:0000271: polysaccharide biosynthetic process | 4.71E-03 |
| 48 | GO:0010087: phloem or xylem histogenesis | 4.71E-03 |
| 49 | GO:0009958: positive gravitropism | 4.96E-03 |
| 50 | GO:0045489: pectin biosynthetic process | 4.96E-03 |
| 51 | GO:0010305: leaf vascular tissue pattern formation | 4.96E-03 |
| 52 | GO:0007018: microtubule-based movement | 5.22E-03 |
| 53 | GO:0042254: ribosome biogenesis | 5.38E-03 |
| 54 | GO:0016032: viral process | 6.00E-03 |
| 55 | GO:0016126: sterol biosynthetic process | 7.40E-03 |
| 56 | GO:0016311: dephosphorylation | 8.60E-03 |
| 57 | GO:0048527: lateral root development | 9.86E-03 |
| 58 | GO:0009910: negative regulation of flower development | 9.86E-03 |
| 59 | GO:0045087: innate immune response | 1.05E-02 |
| 60 | GO:0016051: carbohydrate biosynthetic process | 1.05E-02 |
| 61 | GO:0009640: photomorphogenesis | 1.26E-02 |
| 62 | GO:0008283: cell proliferation | 1.26E-02 |
| 63 | GO:0009965: leaf morphogenesis | 1.37E-02 |
| 64 | GO:0055114: oxidation-reduction process | 1.47E-02 |
| 65 | GO:0006364: rRNA processing | 1.55E-02 |
| 66 | GO:0009845: seed germination | 2.47E-02 |
| 67 | GO:0006414: translational elongation | 2.57E-02 |
| 68 | GO:0009790: embryo development | 2.61E-02 |
| 69 | GO:0007166: cell surface receptor signaling pathway | 3.24E-02 |
| 70 | GO:0009658: chloroplast organization | 4.01E-02 |
| 71 | GO:0016192: vesicle-mediated transport | 4.85E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046905: phytoene synthase activity | 0.00E+00 |
| 2 | GO:0019144: ADP-sugar diphosphatase activity | 0.00E+00 |
| 3 | GO:0050613: delta14-sterol reductase activity | 0.00E+00 |
| 4 | GO:0008756: o-succinylbenzoate-CoA ligase activity | 0.00E+00 |
| 5 | GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity | 0.00E+00 |
| 6 | GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity | 0.00E+00 |
| 7 | GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity | 0.00E+00 |
| 8 | GO:0003984: acetolactate synthase activity | 5.48E-05 |
| 9 | GO:0016776: phosphotransferase activity, phosphate group as acceptor | 5.48E-05 |
| 10 | GO:0080042: ADP-glucose pyrophosphohydrolase activity | 5.48E-05 |
| 11 | GO:0008835: diaminohydroxyphosphoribosylaminopyrimidine deaminase activity | 5.48E-05 |
| 12 | GO:0052381: tRNA dimethylallyltransferase activity | 5.48E-05 |
| 13 | GO:0051996: squalene synthase activity | 5.48E-05 |
| 14 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 1.34E-04 |
| 15 | GO:0010291: carotene beta-ring hydroxylase activity | 1.34E-04 |
| 16 | GO:0080041: ADP-ribose pyrophosphohydrolase activity | 1.34E-04 |
| 17 | GO:0004766: spermidine synthase activity | 1.34E-04 |
| 18 | GO:0003723: RNA binding | 1.93E-04 |
| 19 | GO:0016805: dipeptidase activity | 2.28E-04 |
| 20 | GO:0070402: NADPH binding | 2.28E-04 |
| 21 | GO:0004180: carboxypeptidase activity | 2.28E-04 |
| 22 | GO:0004148: dihydrolipoyl dehydrogenase activity | 2.28E-04 |
| 23 | GO:0043023: ribosomal large subunit binding | 3.33E-04 |
| 24 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 3.33E-04 |
| 25 | GO:0003785: actin monomer binding | 5.66E-04 |
| 26 | GO:0016208: AMP binding | 6.92E-04 |
| 27 | GO:0004526: ribonuclease P activity | 6.92E-04 |
| 28 | GO:0004656: procollagen-proline 4-dioxygenase activity | 8.25E-04 |
| 29 | GO:0003746: translation elongation factor activity | 8.40E-04 |
| 30 | GO:0043022: ribosome binding | 1.11E-03 |
| 31 | GO:0009982: pseudouridine synthase activity | 2.30E-03 |
| 32 | GO:0008266: poly(U) RNA binding | 2.49E-03 |
| 33 | GO:0031418: L-ascorbic acid binding | 3.11E-03 |
| 34 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 3.77E-03 |
| 35 | GO:0016787: hydrolase activity | 4.37E-03 |
| 36 | GO:0016853: isomerase activity | 5.22E-03 |
| 37 | GO:0016597: amino acid binding | 7.11E-03 |
| 38 | GO:0004721: phosphoprotein phosphatase activity | 8.29E-03 |
| 39 | GO:0050897: cobalt ion binding | 9.86E-03 |
| 40 | GO:0030145: manganese ion binding | 9.86E-03 |
| 41 | GO:0004519: endonuclease activity | 1.05E-02 |
| 42 | GO:0003993: acid phosphatase activity | 1.09E-02 |
| 43 | GO:0003777: microtubule motor activity | 1.67E-02 |
| 44 | GO:0003779: actin binding | 1.95E-02 |
| 45 | GO:0008026: ATP-dependent helicase activity | 2.08E-02 |
| 46 | GO:0016758: transferase activity, transferring hexosyl groups | 2.29E-02 |
| 47 | GO:0019843: rRNA binding | 2.34E-02 |
| 48 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 2.38E-02 |
| 49 | GO:0004252: serine-type endopeptidase activity | 2.52E-02 |
| 50 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 2.80E-02 |
| 51 | GO:0005525: GTP binding | 2.83E-02 |
| 52 | GO:0005506: iron ion binding | 3.43E-02 |
| 53 | GO:0003824: catalytic activity | 3.82E-02 |
| 54 | GO:0050660: flavin adenine dinucleotide binding | 4.45E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009537: proplastid | 0.00E+00 |
| 2 | GO:0005948: acetolactate synthase complex | 0.00E+00 |
| 3 | GO:0009507: chloroplast | 1.15E-09 |
| 4 | GO:0009570: chloroplast stroma | 2.00E-05 |
| 5 | GO:0009501: amyloplast | 2.21E-05 |
| 6 | GO:0009508: plastid chromosome | 8.50E-05 |
| 7 | GO:0009513: etioplast | 1.34E-04 |
| 8 | GO:0009509: chromoplast | 2.28E-04 |
| 9 | GO:0030663: COPI-coated vesicle membrane | 4.45E-04 |
| 10 | GO:0009295: nucleoid | 4.63E-04 |
| 11 | GO:0031969: chloroplast membrane | 8.76E-04 |
| 12 | GO:0005680: anaphase-promoting complex | 1.41E-03 |
| 13 | GO:0016604: nuclear body | 1.58E-03 |
| 14 | GO:0030125: clathrin vesicle coat | 1.75E-03 |
| 15 | GO:0005938: cell cortex | 2.30E-03 |
| 16 | GO:0030176: integral component of endoplasmic reticulum membrane | 2.70E-03 |
| 17 | GO:0005759: mitochondrial matrix | 3.12E-03 |
| 18 | GO:0015629: actin cytoskeleton | 4.00E-03 |
| 19 | GO:0005871: kinesin complex | 4.47E-03 |
| 20 | GO:0031965: nuclear membrane | 5.48E-03 |
| 21 | GO:0005778: peroxisomal membrane | 6.83E-03 |
| 22 | GO:0030529: intracellular ribonucleoprotein complex | 7.40E-03 |
| 23 | GO:0000139: Golgi membrane | 1.05E-02 |
| 24 | GO:0043231: intracellular membrane-bounded organelle | 1.06E-02 |
| 25 | GO:0009941: chloroplast envelope | 1.44E-02 |
| 26 | GO:0005747: mitochondrial respiratory chain complex I | 1.79E-02 |
| 27 | GO:0010287: plastoglobule | 2.25E-02 |
| 28 | GO:0005840: ribosome | 3.65E-02 |
| 29 | GO:0005874: microtubule | 4.56E-02 |