co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G16520

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0098586: cellular response to virus	0.00E+00
2	GO:0017009: protein-phycocyanobilin linkage	0.00E+00
3	GO:0009904: chloroplast accumulation movement	1.98E-06
4	GO:0010190: cytochrome b6f complex assembly	3.09E-06
5	GO:0009903: chloroplast avoidance movement	4.52E-06
6	GO:0000481: maturation of 5S rRNA	3.00E-05
7	GO:0071461: cellular response to redox state	3.00E-05
8	GO:0034337: RNA folding	3.00E-05
9	GO:0010362: negative regulation of anion channel activity by blue light	3.00E-05
10	GO:0009767: photosynthetic electron transport chain	3.49E-05
11	GO:0080005: photosystem stoichiometry adjustment	7.58E-05
12	GO:0010042: response to manganese ion	7.58E-05
13	GO:0000256: allantoin catabolic process	7.58E-05
14	GO:0010155: regulation of proton transport	7.58E-05
15	GO:0010275: NAD(P)H dehydrogenase complex assembly	7.58E-05
16	GO:0046741: transport of virus in host, tissue to tissue	7.58E-05
17	GO:0010136: ureide catabolic process	1.32E-04
18	GO:0000913: preprophase band assembly	1.32E-04
19	GO:0031022: nuclear migration along microfilament	1.32E-04
20	GO:0043572: plastid fission	1.97E-04
21	GO:2001141: regulation of RNA biosynthetic process	1.97E-04
22	GO:0006145: purine nucleobase catabolic process	1.97E-04
23	GO:0015976: carbon utilization	2.67E-04
24	GO:0018298: protein-chromophore linkage	3.16E-04
25	GO:0006811: ion transport	3.49E-04
26	GO:0030026: cellular manganese ion homeostasis	5.88E-04
27	GO:0009645: response to low light intensity stimulus	5.88E-04
28	GO:0032508: DNA duplex unwinding	6.76E-04
29	GO:0071482: cellular response to light stimulus	7.68E-04
30	GO:0009638: phototropism	9.61E-04
31	GO:0043069: negative regulation of programmed cell death	1.06E-03
32	GO:0006352: DNA-templated transcription, initiation	1.16E-03
33	GO:0009684: indoleacetic acid biosynthetic process	1.16E-03
34	GO:0009785: blue light signaling pathway	1.38E-03
35	GO:0010207: photosystem II assembly	1.50E-03
36	GO:0010020: chloroplast fission	1.50E-03
37	GO:0046688: response to copper ion	1.61E-03
38	GO:0006833: water transport	1.73E-03
39	GO:0009768: photosynthesis, light harvesting in photosystem I	1.98E-03
40	GO:0051302: regulation of cell division	1.98E-03
41	GO:0034220: ion transmembrane transport	2.80E-03
42	GO:0006662: glycerol ether metabolic process	2.94E-03
43	GO:0007018: microtubule-based movement	3.09E-03
44	GO:0000302: response to reactive oxygen species	3.40E-03
45	GO:0016032: viral process	3.55E-03
46	GO:0071805: potassium ion transmembrane transport	4.03E-03
47	GO:0000910: cytokinesis	4.20E-03
48	GO:0006810: transport	4.32E-03
49	GO:0010411: xyloglucan metabolic process	4.88E-03
50	GO:0000160: phosphorelay signal transduction system	5.41E-03
51	GO:0010119: regulation of stomatal movement	5.78E-03
52	GO:0009637: response to blue light	6.16E-03
53	GO:0034599: cellular response to oxidative stress	6.35E-03
54	GO:0006631: fatty acid metabolic process	6.94E-03
55	GO:0042546: cell wall biogenesis	7.54E-03
56	GO:0009644: response to high light intensity	7.75E-03
57	GO:0006812: cation transport	8.60E-03
58	GO:0006813: potassium ion transport	9.03E-03
59	GO:0006633: fatty acid biosynthetic process	1.59E-02
60	GO:0071555: cell wall organization	1.61E-02
61	GO:0006413: translational initiation	1.62E-02
62	GO:0007623: circadian rhythm	1.70E-02
63	GO:0009409: response to cold	2.18E-02
64	GO:0005975: carbohydrate metabolic process	2.44E-02
65	GO:0007049: cell cycle	2.51E-02
66	GO:0080167: response to karrikin	2.71E-02
67	GO:0046777: protein autophosphorylation	2.84E-02
68	GO:0015979: photosynthesis	2.98E-02
69	GO:0045454: cell redox homeostasis	3.08E-02
70	GO:0006869: lipid transport	3.29E-02
71	GO:0009737: response to abscisic acid	3.43E-02

Rank	GO Term	Adjusted P value
1	GO:0043864: indoleacetamide hydrolase activity	0.00E+00
2	GO:0010486: manganese:proton antiporter activity	0.00E+00
3	GO:0071522: ureidoglycine aminohydrolase activity	0.00E+00
4	GO:0000293: ferric-chelate reductase activity	3.09E-06
5	GO:0016491: oxidoreductase activity	7.39E-06
6	GO:0004328: formamidase activity	3.00E-05
7	GO:0080132: fatty acid alpha-hydroxylase activity	3.00E-05
8	GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	1.97E-04
9	GO:0009882: blue light photoreceptor activity	1.97E-04
10	GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	2.67E-04
11	GO:0001053: plastid sigma factor activity	2.67E-04
12	GO:0016987: sigma factor activity	2.67E-04
13	GO:0004040: amidase activity	3.42E-04
14	GO:0005384: manganese ion transmembrane transporter activity	9.61E-04
15	GO:0004089: carbonate dehydratase activity	1.38E-03
16	GO:0031072: heat shock protein binding	1.38E-03
17	GO:0000155: phosphorelay sensor kinase activity	1.38E-03
18	GO:0004565: beta-galactosidase activity	1.38E-03
19	GO:0031409: pigment binding	1.73E-03
20	GO:0015079: potassium ion transmembrane transporter activity	1.98E-03
21	GO:0008324: cation transmembrane transporter activity	1.98E-03
22	GO:0047134: protein-disulfide reductase activity	2.66E-03
23	GO:0010181: FMN binding	3.09E-03
24	GO:0004791: thioredoxin-disulfide reductase activity	3.09E-03
25	GO:0016762: xyloglucan:xyloglucosyl transferase activity	3.40E-03
26	GO:0048038: quinone binding	3.40E-03
27	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	3.71E-03
28	GO:0015250: water channel activity	4.36E-03
29	GO:0003729: mRNA binding	4.39E-03
30	GO:0016168: chlorophyll binding	4.53E-03
31	GO:0016798: hydrolase activity, acting on glycosyl bonds	4.88E-03
32	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	9.03E-03
33	GO:0003777: microtubule motor activity	9.70E-03
34	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.04E-02
35	GO:0004650: polygalacturonase activity	1.09E-02
36	GO:0022857: transmembrane transporter activity	1.11E-02
37	GO:0051082: unfolded protein binding	1.16E-02
38	GO:0015035: protein disulfide oxidoreductase activity	1.18E-02
39	GO:0016829: lyase activity	1.43E-02
40	GO:0030170: pyridoxal phosphate binding	1.46E-02
41	GO:0008017: microtubule binding	1.76E-02
42	GO:0003824: catalytic activity	1.77E-02
43	GO:0042802: identical protein binding	2.02E-02
44	GO:0004672: protein kinase activity	2.36E-02
45	GO:0042803: protein homodimerization activity	3.18E-02
46	GO:0008289: lipid binding	4.52E-02
47	GO:0016887: ATPase activity	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	1.39E-05
2	GO:0009507: chloroplast	2.12E-05
3	GO:0009782: photosystem I antenna complex	3.00E-05
4	GO:0009535: chloroplast thylakoid membrane	2.55E-04
5	GO:0009898: cytoplasmic side of plasma membrane	2.67E-04
6	GO:0009986: cell surface	5.88E-04
7	GO:0032040: small-subunit processome	1.27E-03
8	GO:0030076: light-harvesting complex	1.61E-03
9	GO:0046658: anchored component of plasma membrane	2.11E-03
10	GO:0005871: kinesin complex	2.66E-03
11	GO:0005770: late endosome	2.94E-03
12	GO:0009504: cell plate	3.24E-03
13	GO:0005694: chromosome	3.55E-03
14	GO:0009941: chloroplast envelope	4.37E-03
15	GO:0009707: chloroplast outer membrane	5.23E-03
16	GO:0005773: vacuole	5.26E-03
17	GO:0016021: integral component of membrane	5.79E-03
18	GO:0005819: spindle	6.54E-03
19	GO:0031902: late endosome membrane	6.94E-03
20	GO:0031977: thylakoid lumen	6.94E-03
21	GO:0016020: membrane	8.57E-03
22	GO:0009534: chloroplast thylakoid	9.56E-03
23	GO:0031225: anchored component of membrane	1.24E-02
24	GO:0005886: plasma membrane	1.24E-02
25	GO:0010287: plastoglobule	1.31E-02
26	GO:0009543: chloroplast thylakoid lumen	1.36E-02
27	GO:0005623: cell	1.38E-02
28	GO:0009524: phragmoplast	1.41E-02
29	GO:0000139: Golgi membrane	2.18E-02
30	GO:0005874: microtubule	2.64E-02
31	GO:0031969: chloroplast membrane	2.71E-02
32	GO:0009570: chloroplast stroma	2.87E-02
33	GO:0005887: integral component of plasma membrane	4.44E-02