Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G16510

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:2000630: positive regulation of miRNA metabolic process0.00E+00
2GO:0098755: maintenance of seed dormancy by absisic acid0.00E+00
3GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance0.00E+00
4GO:0090359: negative regulation of abscisic acid biosynthetic process0.00E+00
5GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
6GO:0009312: oligosaccharide biosynthetic process0.00E+00
7GO:0046865: terpenoid transport0.00E+00
8GO:2000636: positive regulation of primary miRNA processing0.00E+00
9GO:0010324: membrane invagination0.00E+00
10GO:0010055: atrichoblast differentiation0.00E+00
11GO:1902001: fatty acid transmembrane transport0.00E+00
12GO:0071456: cellular response to hypoxia2.60E-07
13GO:0010112: regulation of systemic acquired resistance1.94E-05
14GO:0033358: UDP-L-arabinose biosynthetic process6.79E-05
15GO:0045227: capsule polysaccharide biosynthetic process6.79E-05
16GO:0009751: response to salicylic acid1.04E-04
17GO:0009643: photosynthetic acclimation1.54E-04
18GO:0006012: galactose metabolic process2.25E-04
19GO:0010200: response to chitin2.51E-04
20GO:0051707: response to other organism2.78E-04
21GO:0043547: positive regulation of GTPase activity3.27E-04
22GO:0019567: arabinose biosynthetic process3.27E-04
23GO:0033306: phytol metabolic process3.27E-04
24GO:0050691: regulation of defense response to virus by host3.27E-04
25GO:0032491: detection of molecule of fungal origin3.27E-04
26GO:0009968: negative regulation of signal transduction3.27E-04
27GO:1990542: mitochondrial transmembrane transport3.27E-04
28GO:0032107: regulation of response to nutrient levels3.27E-04
29GO:0048508: embryonic meristem development3.27E-04
30GO:0015760: glucose-6-phosphate transport3.27E-04
31GO:0010204: defense response signaling pathway, resistance gene-independent4.21E-04
32GO:0010208: pollen wall assembly4.21E-04
33GO:0009737: response to abscisic acid4.90E-04
34GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway5.99E-04
35GO:0006904: vesicle docking involved in exocytosis6.32E-04
36GO:0019374: galactolipid metabolic process7.13E-04
37GO:0015908: fatty acid transport7.13E-04
38GO:0002240: response to molecule of oomycetes origin7.13E-04
39GO:0010115: regulation of abscisic acid biosynthetic process7.13E-04
40GO:0044419: interspecies interaction between organisms7.13E-04
41GO:0000719: photoreactive repair7.13E-04
42GO:0009945: radial axis specification7.13E-04
43GO:0015712: hexose phosphate transport7.13E-04
44GO:0051258: protein polymerization7.13E-04
45GO:0010271: regulation of chlorophyll catabolic process7.13E-04
46GO:0019725: cellular homeostasis7.13E-04
47GO:0071668: plant-type cell wall assembly7.13E-04
48GO:0010155: regulation of proton transport7.13E-04
49GO:0080151: positive regulation of salicylic acid mediated signaling pathway7.13E-04
50GO:0080181: lateral root branching7.13E-04
51GO:0055088: lipid homeostasis7.13E-04
52GO:0052546: cell wall pectin metabolic process1.16E-03
53GO:0015695: organic cation transport1.16E-03
54GO:0015714: phosphoenolpyruvate transport1.16E-03
55GO:0080168: abscisic acid transport1.16E-03
56GO:0006048: UDP-N-acetylglucosamine biosynthetic process1.16E-03
57GO:0006954: inflammatory response1.16E-03
58GO:0043328: protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway1.16E-03
59GO:0080163: regulation of protein serine/threonine phosphatase activity1.16E-03
60GO:0035436: triose phosphate transmembrane transport1.16E-03
61GO:0045836: positive regulation of meiotic nuclear division1.16E-03
62GO:0010186: positive regulation of cellular defense response1.16E-03
63GO:0006065: UDP-glucuronate biosynthetic process1.16E-03
64GO:0015692: lead ion transport1.16E-03
65GO:0002237: response to molecule of bacterial origin1.17E-03
66GO:0009225: nucleotide-sugar metabolic process1.31E-03
67GO:0080147: root hair cell development1.61E-03
68GO:0010731: protein glutathionylation1.66E-03
69GO:0015696: ammonium transport1.66E-03
70GO:0071323: cellular response to chitin1.66E-03
71GO:0010116: positive regulation of abscisic acid biosynthetic process1.66E-03
72GO:0006887: exocytosis1.71E-03
73GO:0006897: endocytosis1.71E-03
74GO:0010150: leaf senescence1.76E-03
75GO:0042742: defense response to bacterium2.11E-03
76GO:0007166: cell surface receptor signaling pathway2.17E-03
77GO:0072488: ammonium transmembrane transport2.23E-03
78GO:0015713: phosphoglycerate transport2.23E-03
79GO:0010109: regulation of photosynthesis2.23E-03
80GO:0060548: negative regulation of cell death2.23E-03
81GO:0009753: response to jasmonic acid2.46E-03
82GO:0009306: protein secretion2.53E-03
83GO:0045927: positive regulation of growth2.84E-03
84GO:0034052: positive regulation of plant-type hypersensitive response2.84E-03
85GO:0030041: actin filament polymerization2.84E-03
86GO:0009229: thiamine diphosphate biosynthetic process2.84E-03
87GO:0009435: NAD biosynthetic process2.84E-03
88GO:0042391: regulation of membrane potential2.96E-03
89GO:0048317: seed morphogenesis3.51E-03
90GO:0009228: thiamine biosynthetic process3.51E-03
91GO:0033365: protein localization to organelle3.51E-03
92GO:0002238: response to molecule of fungal origin3.51E-03
93GO:0009759: indole glucosinolate biosynthetic process3.51E-03
94GO:0010256: endomembrane system organization3.51E-03
95GO:0009749: response to glucose3.68E-03
96GO:0010193: response to ozone3.94E-03
97GO:0071470: cellular response to osmotic stress4.23E-03
98GO:0045926: negative regulation of growth4.23E-03
99GO:0009942: longitudinal axis specification4.23E-03
100GO:0009624: response to nematode4.34E-03
101GO:1900056: negative regulation of leaf senescence4.99E-03
102GO:1900057: positive regulation of leaf senescence4.99E-03
103GO:0000122: negative regulation of transcription from RNA polymerase II promoter4.99E-03
104GO:1902074: response to salt4.99E-03
105GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway4.99E-03
106GO:0010928: regulation of auxin mediated signaling pathway5.80E-03
107GO:0009787: regulation of abscisic acid-activated signaling pathway5.80E-03
108GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline5.80E-03
109GO:0009819: drought recovery5.80E-03
110GO:0043068: positive regulation of programmed cell death5.80E-03
111GO:0045010: actin nucleation5.80E-03
112GO:0031540: regulation of anthocyanin biosynthetic process5.80E-03
113GO:0006644: phospholipid metabolic process5.80E-03
114GO:0010029: regulation of seed germination6.03E-03
115GO:0010120: camalexin biosynthetic process6.65E-03
116GO:0006979: response to oxidative stress6.77E-03
117GO:0006468: protein phosphorylation7.40E-03
118GO:0019432: triglyceride biosynthetic process7.54E-03
119GO:0007338: single fertilization7.54E-03
120GO:0009407: toxin catabolic process8.21E-03
121GO:0040008: regulation of growth8.21E-03
122GO:0090332: stomatal closure8.48E-03
123GO:0048268: clathrin coat assembly8.48E-03
124GO:0010380: regulation of chlorophyll biosynthetic process8.48E-03
125GO:0008202: steroid metabolic process8.48E-03
126GO:0010119: regulation of stomatal movement8.61E-03
127GO:0050832: defense response to fungus8.67E-03
128GO:0009870: defense response signaling pathway, resistance gene-dependent9.45E-03
129GO:0006032: chitin catabolic process9.45E-03
130GO:0006470: protein dephosphorylation1.03E-02
131GO:0009682: induced systemic resistance1.05E-02
132GO:0019684: photosynthesis, light reaction1.05E-02
133GO:0009089: lysine biosynthetic process via diaminopimelate1.05E-02
134GO:0072593: reactive oxygen species metabolic process1.05E-02
135GO:0015031: protein transport1.06E-02
136GO:0045037: protein import into chloroplast stroma1.15E-02
137GO:0000266: mitochondrial fission1.15E-02
138GO:2000028: regulation of photoperiodism, flowering1.26E-02
139GO:0018107: peptidyl-threonine phosphorylation1.26E-02
140GO:0009636: response to toxic substance1.37E-02
141GO:0031347: regulation of defense response1.48E-02
142GO:0080188: RNA-directed DNA methylation1.49E-02
143GO:0046688: response to copper ion1.49E-02
144GO:0006952: defense response1.59E-02
145GO:2000377: regulation of reactive oxygen species metabolic process1.73E-02
146GO:0009723: response to ethylene1.83E-02
147GO:0006874: cellular calcium ion homeostasis1.86E-02
148GO:0006825: copper ion transport1.86E-02
149GO:0051321: meiotic cell cycle1.99E-02
150GO:0016998: cell wall macromolecule catabolic process1.99E-02
151GO:0080167: response to karrikin2.00E-02
152GO:0009626: plant-type hypersensitive response2.08E-02
153GO:0009411: response to UV2.25E-02
154GO:0009625: response to insect2.25E-02
155GO:0015979: photosynthesis2.36E-02
156GO:0042127: regulation of cell proliferation2.39E-02
157GO:0018105: peptidyl-serine phosphorylation2.42E-02
158GO:0000271: polysaccharide biosynthetic process2.68E-02
159GO:0000413: protein peptidyl-prolyl isomerization2.68E-02
160GO:0000398: mRNA splicing, via spliceosome2.71E-02
161GO:0009960: endosperm development2.82E-02
162GO:0045489: pectin biosynthetic process2.82E-02
163GO:0006885: regulation of pH2.82E-02
164GO:0010182: sugar mediated signaling pathway2.82E-02
165GO:0009845: seed germination3.18E-02
166GO:0009408: response to heat3.25E-02
167GO:0071554: cell wall organization or biogenesis3.28E-02
168GO:0002229: defense response to oomycetes3.28E-02
169GO:0019761: glucosinolate biosynthetic process3.44E-02
170GO:0009567: double fertilization forming a zygote and endosperm3.76E-02
171GO:0009788: negative regulation of abscisic acid-activated signaling pathway4.43E-02
172GO:0009739: response to gibberellin4.53E-02
173GO:0006357: regulation of transcription from RNA polymerase II promoter4.59E-02
174GO:0006906: vesicle fusion4.61E-02
175GO:0009627: systemic acquired resistance4.61E-02
176GO:0006950: response to stress4.78E-02
177GO:0008380: RNA splicing4.82E-02
178GO:0009617: response to bacterium4.82E-02
RankGO TermAdjusted P value
1GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity0.00E+00
2GO:0008734: L-aspartate oxidase activity0.00E+00
3GO:0004610: phosphoacetylglucosamine mutase activity0.00E+00
4GO:0005212: structural constituent of eye lens0.00E+00
5GO:0050334: thiaminase activity0.00E+00
6GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor0.00E+00
7GO:0044318: L-aspartate:fumarate oxidoreductase activity0.00E+00
8GO:0003978: UDP-glucose 4-epimerase activity4.04E-06
9GO:0050373: UDP-arabinose 4-epimerase activity6.79E-05
10GO:2001147: camalexin binding3.27E-04
11GO:0015245: fatty acid transporter activity3.27E-04
12GO:0010285: L,L-diaminopimelate aminotransferase activity3.27E-04
13GO:2001227: quercitrin binding3.27E-04
14GO:0005509: calcium ion binding5.37E-04
15GO:0015152: glucose-6-phosphate transmembrane transporter activity7.13E-04
16GO:0050403: trans-zeatin O-beta-D-glucosyltransferase activity7.13E-04
17GO:0050502: cis-zeatin O-beta-D-glucosyltransferase activity7.13E-04
18GO:0032934: sterol binding7.13E-04
19GO:0048531: beta-1,3-galactosyltransferase activity7.13E-04
20GO:0015036: disulfide oxidoreductase activity7.13E-04
21GO:0047364: desulfoglucosinolate sulfotransferase activity7.13E-04
22GO:0008375: acetylglucosaminyltransferase activity8.42E-04
23GO:0030247: polysaccharide binding8.99E-04
24GO:0016531: copper chaperone activity1.16E-03
25GO:0032403: protein complex binding1.16E-03
26GO:0071917: triose-phosphate transmembrane transporter activity1.16E-03
27GO:0003979: UDP-glucose 6-dehydrogenase activity1.16E-03
28GO:0004324: ferredoxin-NADP+ reductase activity1.16E-03
29GO:0030552: cAMP binding1.31E-03
30GO:0030553: cGMP binding1.31E-03
31GO:0001046: core promoter sequence-specific DNA binding1.61E-03
32GO:0035529: NADH pyrophosphatase activity1.66E-03
33GO:0017077: oxidative phosphorylation uncoupler activity1.66E-03
34GO:0005216: ion channel activity1.78E-03
35GO:0004930: G-protein coupled receptor activity2.23E-03
36GO:0015120: phosphoglycerate transmembrane transporter activity2.23E-03
37GO:0043565: sequence-specific DNA binding2.25E-03
38GO:0004499: N,N-dimethylaniline monooxygenase activity2.53E-03
39GO:0005496: steroid binding2.84E-03
40GO:0047631: ADP-ribose diphosphatase activity2.84E-03
41GO:0070696: transmembrane receptor protein serine/threonine kinase binding2.84E-03
42GO:0030551: cyclic nucleotide binding2.96E-03
43GO:0005249: voltage-gated potassium channel activity2.96E-03
44GO:0000210: NAD+ diphosphatase activity3.51E-03
45GO:0008519: ammonium transmembrane transporter activity3.51E-03
46GO:0102391: decanoate--CoA ligase activity4.23E-03
47GO:0003950: NAD+ ADP-ribosyltransferase activity4.23E-03
48GO:0004144: diacylglycerol O-acyltransferase activity4.23E-03
49GO:0004656: procollagen-proline 4-dioxygenase activity4.23E-03
50GO:0043295: glutathione binding4.99E-03
51GO:0004620: phospholipase activity4.99E-03
52GO:0004467: long-chain fatty acid-CoA ligase activity4.99E-03
53GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity5.07E-03
54GO:0005544: calcium-dependent phospholipid binding5.80E-03
55GO:0004033: aldo-keto reductase (NADP) activity5.80E-03
56GO:0004714: transmembrane receptor protein tyrosine kinase activity5.80E-03
57GO:0008142: oxysterol binding6.65E-03
58GO:0004675: transmembrane receptor protein serine/threonine kinase activity7.97E-03
59GO:0016301: kinase activity8.08E-03
60GO:0047617: acyl-CoA hydrolase activity8.48E-03
61GO:0015020: glucuronosyltransferase activity9.45E-03
62GO:0004864: protein phosphatase inhibitor activity9.45E-03
63GO:0004568: chitinase activity9.45E-03
64GO:0005545: 1-phosphatidylinositol binding9.45E-03
65GO:0050661: NADP binding1.08E-02
66GO:0004364: glutathione transferase activity1.17E-02
67GO:0016757: transferase activity, transferring glycosyl groups1.19E-02
68GO:0005516: calmodulin binding1.21E-02
69GO:0005315: inorganic phosphate transmembrane transporter activity1.26E-02
70GO:0051287: NAD binding1.48E-02
71GO:0008061: chitin binding1.49E-02
72GO:0008146: sulfotransferase activity1.49E-02
73GO:0005217: intracellular ligand-gated ion channel activity1.49E-02
74GO:0004970: ionotropic glutamate receptor activity1.49E-02
75GO:0031418: L-ascorbic acid binding1.73E-02
76GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.12E-02
77GO:0008810: cellulase activity2.25E-02
78GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting2.50E-02
79GO:0005451: monovalent cation:proton antiporter activity2.68E-02
80GO:0004674: protein serine/threonine kinase activity2.73E-02
81GO:0004722: protein serine/threonine phosphatase activity2.81E-02
82GO:0005199: structural constituent of cell wall2.82E-02
83GO:0030276: clathrin binding2.82E-02
84GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding2.86E-02
85GO:0016758: transferase activity, transferring hexosyl groups2.87E-02
86GO:0015299: solute:proton antiporter activity2.97E-02
87GO:0019901: protein kinase binding3.12E-02
88GO:0004252: serine-type endopeptidase activity3.27E-02
89GO:0004197: cysteine-type endopeptidase activity3.44E-02
90GO:0015385: sodium:proton antiporter activity3.60E-02
91GO:0008483: transaminase activity3.92E-02
92GO:0016413: O-acetyltransferase activity4.09E-02
93GO:0009931: calcium-dependent protein serine/threonine kinase activity4.61E-02
94GO:0004806: triglyceride lipase activity4.78E-02
95GO:0004721: phosphoprotein phosphatase activity4.78E-02
96GO:0004683: calmodulin-dependent protein kinase activity4.78E-02
RankGO TermAdjusted P value
1GO:0016021: integral component of membrane3.51E-07
2GO:0005794: Golgi apparatus3.06E-05
3GO:0000813: ESCRT I complex1.07E-04
4GO:0005886: plasma membrane6.30E-04
5GO:0005901: caveola7.13E-04
6GO:0031314: extrinsic component of mitochondrial inner membrane7.13E-04
7GO:0008287: protein serine/threonine phosphatase complex1.16E-03
8GO:0009530: primary cell wall1.16E-03
9GO:0070062: extracellular exosome1.66E-03
10GO:0000164: protein phosphatase type 1 complex2.84E-03
11GO:0000145: exocyst4.21E-03
12GO:0016363: nuclear matrix4.23E-03
13GO:0032580: Golgi cisterna membrane4.77E-03
14GO:0015030: Cajal body8.48E-03
15GO:0031012: extracellular matrix1.26E-02
16GO:0005578: proteinaceous extracellular matrix1.26E-02
17GO:0005802: trans-Golgi network1.35E-02
18GO:0005795: Golgi stack1.49E-02
19GO:0005789: endoplasmic reticulum membrane1.52E-02
20GO:0005768: endosome1.68E-02
21GO:0005758: mitochondrial intermembrane space1.73E-02
22GO:0005681: spliceosomal complex1.95E-02
23GO:0005741: mitochondrial outer membrane1.99E-02
24GO:0005905: clathrin-coated pit1.99E-02
25GO:0009706: chloroplast inner membrane2.35E-02
26GO:0030136: clathrin-coated vesicle2.53E-02
27GO:0005770: late endosome2.82E-02
28GO:0005743: mitochondrial inner membrane2.97E-02
29GO:0000139: Golgi membrane3.35E-02
30GO:0005887: integral component of plasma membrane4.73E-02
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Gene type



Gene DE type