GO Enrichment Analysis of Co-expressed Genes with
AT3G16290
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000372: Group I intron splicing | 0.00E+00 |
| 2 | GO:2000023: regulation of lateral root development | 0.00E+00 |
| 3 | GO:0010266: response to vitamin B1 | 3.12E-05 |
| 4 | GO:0006420: arginyl-tRNA aminoacylation | 7.88E-05 |
| 5 | GO:0016045: detection of bacterium | 1.37E-04 |
| 6 | GO:0045493: xylan catabolic process | 1.37E-04 |
| 7 | GO:0009451: RNA modification | 1.50E-04 |
| 8 | GO:0009229: thiamine diphosphate biosynthetic process | 3.53E-04 |
| 9 | GO:0006465: signal peptide processing | 3.53E-04 |
| 10 | GO:0042793: transcription from plastid promoter | 4.34E-04 |
| 11 | GO:0009228: thiamine biosynthetic process | 4.34E-04 |
| 12 | GO:0000373: Group II intron splicing | 8.92E-04 |
| 13 | GO:0009793: embryo development ending in seed dormancy | 1.61E-03 |
| 14 | GO:0006289: nucleotide-excision repair | 1.92E-03 |
| 15 | GO:0006338: chromatin remodeling | 1.92E-03 |
| 16 | GO:0007010: cytoskeleton organization | 1.92E-03 |
| 17 | GO:0010073: meristem maintenance | 2.05E-03 |
| 18 | GO:0015992: proton transport | 2.19E-03 |
| 19 | GO:0048868: pollen tube development | 3.05E-03 |
| 20 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 4.69E-03 |
| 21 | GO:0046686: response to cadmium ion | 4.97E-03 |
| 22 | GO:0010411: xyloglucan metabolic process | 5.05E-03 |
| 23 | GO:0010311: lateral root formation | 5.60E-03 |
| 24 | GO:0048527: lateral root development | 5.99E-03 |
| 25 | GO:0006839: mitochondrial transport | 6.98E-03 |
| 26 | GO:0008283: cell proliferation | 7.60E-03 |
| 27 | GO:0009736: cytokinin-activated signaling pathway | 9.36E-03 |
| 28 | GO:0016569: covalent chromatin modification | 1.15E-02 |
| 29 | GO:0009553: embryo sac development | 1.17E-02 |
| 30 | GO:0006508: proteolysis | 1.18E-02 |
| 31 | GO:0009790: embryo development | 1.57E-02 |
| 32 | GO:0040008: regulation of growth | 1.71E-02 |
| 33 | GO:0009733: response to auxin | 1.90E-02 |
| 34 | GO:0009739: response to gibberellin | 1.91E-02 |
| 35 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 1.91E-02 |
| 36 | GO:0006810: transport | 2.49E-02 |
| 37 | GO:0009723: response to ethylene | 2.67E-02 |
| 38 | GO:0048366: leaf development | 2.71E-02 |
| 39 | GO:0010200: response to chitin | 2.88E-02 |
| 40 | GO:0045454: cell redox homeostasis | 3.19E-02 |
| 41 | GO:0045892: negative regulation of transcription, DNA-templated | 3.23E-02 |
| 42 | GO:0006397: mRNA processing | 3.82E-02 |
| 43 | GO:0048364: root development | 3.82E-02 |
| 44 | GO:0009734: auxin-activated signaling pathway | 4.73E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0061634: alpha-D-xyloside xylohydrolase | 0.00E+00 |
| 2 | GO:0080176: xyloglucan 1,6-alpha-xylosidase activity | 0.00E+00 |
| 3 | GO:0080041: ADP-ribose pyrophosphohydrolase activity | 7.88E-05 |
| 4 | GO:0004814: arginine-tRNA ligase activity | 7.88E-05 |
| 5 | GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity | 7.88E-05 |
| 6 | GO:0032549: ribonucleoside binding | 1.37E-04 |
| 7 | GO:0016805: dipeptidase activity | 1.37E-04 |
| 8 | GO:0004148: dihydrolipoyl dehydrogenase activity | 1.37E-04 |
| 9 | GO:0009678: hydrogen-translocating pyrophosphatase activity | 2.04E-04 |
| 10 | GO:0070628: proteasome binding | 2.76E-04 |
| 11 | GO:0009044: xylan 1,4-beta-xylosidase activity | 2.76E-04 |
| 12 | GO:0046556: alpha-L-arabinofuranosidase activity | 2.76E-04 |
| 13 | GO:0070696: transmembrane receptor protein serine/threonine kinase binding | 3.53E-04 |
| 14 | GO:0004222: metalloendopeptidase activity | 3.66E-04 |
| 15 | GO:0031593: polyubiquitin binding | 4.34E-04 |
| 16 | GO:0004656: procollagen-proline 4-dioxygenase activity | 5.20E-04 |
| 17 | GO:0004427: inorganic diphosphatase activity | 6.07E-04 |
| 18 | GO:0004519: endonuclease activity | 6.42E-04 |
| 19 | GO:0003678: DNA helicase activity | 8.92E-04 |
| 20 | GO:0001054: RNA polymerase I activity | 1.20E-03 |
| 21 | GO:0051536: iron-sulfur cluster binding | 1.92E-03 |
| 22 | GO:0031418: L-ascorbic acid binding | 1.92E-03 |
| 23 | GO:0043130: ubiquitin binding | 1.92E-03 |
| 24 | GO:0003723: RNA binding | 2.57E-03 |
| 25 | GO:0008536: Ran GTPase binding | 3.05E-03 |
| 26 | GO:0003684: damaged DNA binding | 4.00E-03 |
| 27 | GO:0008237: metallopeptidase activity | 4.17E-03 |
| 28 | GO:0050897: cobalt ion binding | 5.99E-03 |
| 29 | GO:0051539: 4 iron, 4 sulfur cluster binding | 6.98E-03 |
| 30 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 9.36E-03 |
| 31 | GO:0004386: helicase activity | 1.27E-02 |
| 32 | GO:0046872: metal ion binding | 1.29E-02 |
| 33 | GO:0019843: rRNA binding | 1.41E-02 |
| 34 | GO:0016829: lyase activity | 1.49E-02 |
| 35 | GO:0008017: microtubule binding | 1.82E-02 |
| 36 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 2.09E-02 |
| 37 | GO:0003682: chromatin binding | 2.51E-02 |
| 38 | GO:0050660: flavin adenine dinucleotide binding | 2.67E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 3.30E-04 |
| 2 | GO:0005736: DNA-directed RNA polymerase I complex | 8.92E-04 |
| 3 | GO:0009508: plastid chromosome | 1.43E-03 |
| 4 | GO:0009532: plastid stroma | 2.19E-03 |
| 5 | GO:0009295: nucleoid | 4.17E-03 |
| 6 | GO:0030529: intracellular ribonucleoprotein complex | 4.52E-03 |
| 7 | GO:0009570: chloroplast stroma | 7.84E-03 |
| 8 | GO:0005856: cytoskeleton | 8.24E-03 |
| 9 | GO:0005747: mitochondrial respiratory chain complex I | 1.08E-02 |
| 10 | GO:0009706: chloroplast inner membrane | 1.20E-02 |
| 11 | GO:0048046: apoplast | 1.46E-02 |
| 12 | GO:0005759: mitochondrial matrix | 1.65E-02 |
| 13 | GO:0009536: plastid | 2.08E-02 |
| 14 | GO:0005789: endoplasmic reticulum membrane | 2.59E-02 |
| 15 | GO:0005874: microtubule | 2.74E-02 |
| 16 | GO:0005743: mitochondrial inner membrane | 3.52E-02 |
| 17 | GO:0043231: intracellular membrane-bounded organelle | 3.97E-02 |