GO Enrichment Analysis of Co-expressed Genes with
AT3G16140
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015979: photosynthesis | 4.90E-14 |
| 2 | GO:0009768: photosynthesis, light harvesting in photosystem I | 2.50E-10 |
| 3 | GO:0018298: protein-chromophore linkage | 7.70E-09 |
| 4 | GO:0009645: response to low light intensity stimulus | 1.29E-06 |
| 5 | GO:0010218: response to far red light | 1.36E-06 |
| 6 | GO:0009637: response to blue light | 1.75E-06 |
| 7 | GO:0010114: response to red light | 2.74E-06 |
| 8 | GO:0019684: photosynthesis, light reaction | 5.53E-06 |
| 9 | GO:0019252: starch biosynthetic process | 3.88E-05 |
| 10 | GO:0009631: cold acclimation | 1.03E-04 |
| 11 | GO:0010600: regulation of auxin biosynthetic process | 1.14E-04 |
| 12 | GO:0010021: amylopectin biosynthetic process | 1.14E-04 |
| 13 | GO:0009765: photosynthesis, light harvesting | 1.14E-04 |
| 14 | GO:0009644: response to high light intensity | 1.63E-04 |
| 15 | GO:0010244: response to low fluence blue light stimulus by blue low-fluence system | 2.25E-04 |
| 16 | GO:0010196: nonphotochemical quenching | 2.66E-04 |
| 17 | GO:0010928: regulation of auxin mediated signaling pathway | 3.08E-04 |
| 18 | GO:0005978: glycogen biosynthetic process | 3.08E-04 |
| 19 | GO:2000652: regulation of secondary cell wall biogenesis | 5.39E-04 |
| 20 | GO:0018119: peptidyl-cysteine S-nitrosylation | 5.39E-04 |
| 21 | GO:0010207: photosystem II assembly | 6.92E-04 |
| 22 | GO:0009409: response to cold | 8.40E-04 |
| 23 | GO:0009693: ethylene biosynthetic process | 1.08E-03 |
| 24 | GO:0042631: cellular response to water deprivation | 1.26E-03 |
| 25 | GO:0010183: pollen tube guidance | 1.46E-03 |
| 26 | GO:0009737: response to abscisic acid | 1.47E-03 |
| 27 | GO:0009735: response to cytokinin | 2.18E-03 |
| 28 | GO:0009817: defense response to fungus, incompatible interaction | 2.32E-03 |
| 29 | GO:0009585: red, far-red light phototransduction | 3.95E-03 |
| 30 | GO:0042742: defense response to bacterium | 4.78E-03 |
| 31 | GO:0007623: circadian rhythm | 7.34E-03 |
| 32 | GO:0010150: leaf senescence | 7.34E-03 |
| 33 | GO:0008380: RNA splicing | 8.30E-03 |
| 34 | GO:0050832: defense response to fungus | 1.42E-02 |
| 35 | GO:0009751: response to salicylic acid | 1.51E-02 |
| 36 | GO:0006397: mRNA processing | 1.57E-02 |
| 37 | GO:0008152: metabolic process | 1.64E-02 |
| 38 | GO:0006357: regulation of transcription from RNA polymerase II promoter | 1.86E-02 |
| 39 | GO:0006979: response to oxidative stress | 3.82E-02 |
| 40 | GO:0030154: cell differentiation | 4.04E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0036033: mediator complex binding | 0.00E+00 |
| 2 | GO:0031409: pigment binding | 1.52E-10 |
| 3 | GO:0016168: chlorophyll binding | 4.71E-09 |
| 4 | GO:0008266: poly(U) RNA binding | 9.16E-06 |
| 5 | GO:0005534: galactose binding | 1.13E-05 |
| 6 | GO:0033201: alpha-1,4-glucan synthase activity | 3.00E-05 |
| 7 | GO:0004373: glycogen (starch) synthase activity | 5.40E-05 |
| 8 | GO:0004324: ferredoxin-NADP+ reductase activity | 5.40E-05 |
| 9 | GO:0009011: starch synthase activity | 1.14E-04 |
| 10 | GO:0008878: glucose-1-phosphate adenylyltransferase activity | 1.14E-04 |
| 11 | GO:0004045: aminoacyl-tRNA hydrolase activity | 1.14E-04 |
| 12 | GO:0003959: NADPH dehydrogenase activity | 1.49E-04 |
| 13 | GO:0005515: protein binding | 2.47E-03 |
| 14 | GO:0046872: metal ion binding | 3.79E-03 |
| 15 | GO:0005509: calcium ion binding | 4.41E-03 |
| 16 | GO:0016787: hydrolase activity | 1.02E-02 |
| 17 | GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting | 1.32E-02 |
| 18 | GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding | 1.42E-02 |
| 19 | GO:0008289: lipid binding | 1.93E-02 |
| 20 | GO:0044212: transcription regulatory region DNA binding | 3.80E-02 |
| 21 | GO:0016491: oxidoreductase activity | 4.62E-02 |
| 22 | GO:0046983: protein dimerization activity | 4.67E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005943: phosphatidylinositol 3-kinase complex, class IA | 0.00E+00 |
| 2 | GO:0098572: stromal side of plastid thylakoid membrane | 0.00E+00 |
| 3 | GO:0009534: chloroplast thylakoid | 3.90E-18 |
| 4 | GO:0009579: thylakoid | 4.19E-16 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 5.91E-15 |
| 6 | GO:0010287: plastoglobule | 7.08E-14 |
| 7 | GO:0009507: chloroplast | 1.64E-13 |
| 8 | GO:0009941: chloroplast envelope | 3.36E-13 |
| 9 | GO:0030076: light-harvesting complex | 1.16E-10 |
| 10 | GO:0009522: photosystem I | 1.24E-09 |
| 11 | GO:0009570: chloroplast stroma | 2.17E-09 |
| 12 | GO:0009538: photosystem I reaction center | 1.75E-06 |
| 13 | GO:0030095: chloroplast photosystem II | 9.16E-06 |
| 14 | GO:0009782: photosystem I antenna complex | 1.13E-05 |
| 15 | GO:0009783: photosystem II antenna complex | 1.13E-05 |
| 16 | GO:0009654: photosystem II oxygen evolving complex | 1.58E-05 |
| 17 | GO:0009523: photosystem II | 3.88E-05 |
| 18 | GO:0019898: extrinsic component of membrane | 3.88E-05 |
| 19 | GO:0009517: PSII associated light-harvesting complex II | 1.14E-04 |
| 20 | GO:0031977: thylakoid lumen | 1.37E-04 |
| 21 | GO:0009533: chloroplast stromal thylakoid | 2.66E-04 |
| 22 | GO:0009501: amyloplast | 3.08E-04 |
| 23 | GO:0009543: chloroplast thylakoid lumen | 3.70E-04 |
| 24 | GO:0042644: chloroplast nucleoid | 3.97E-04 |
| 25 | GO:0016020: membrane | 4.86E-04 |
| 26 | GO:0009508: plastid chromosome | 6.40E-04 |
| 27 | GO:0042651: thylakoid membrane | 9.08E-04 |
| 28 | GO:0009295: nucleoid | 1.80E-03 |
| 29 | GO:0030529: intracellular ribonucleoprotein complex | 1.95E-03 |
| 30 | GO:0048046: apoplast | 2.87E-03 |
| 31 | GO:0031969: chloroplast membrane | 1.16E-02 |
| 32 | GO:0016021: integral component of membrane | 2.32E-02 |