GO Enrichment Analysis of Co-expressed Genes with
AT3G15900
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0017038: protein import | 0.00E+00 |
| 2 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 3 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
| 4 | GO:0018131: oxazole or thiazole biosynthetic process | 0.00E+00 |
| 5 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 6 | GO:0035970: peptidyl-threonine dephosphorylation | 0.00E+00 |
| 7 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 1.03E-05 |
| 8 | GO:0010236: plastoquinone biosynthetic process | 3.14E-05 |
| 9 | GO:0009658: chloroplast organization | 9.86E-05 |
| 10 | GO:0006810: transport | 1.04E-04 |
| 11 | GO:0071482: cellular response to light stimulus | 1.42E-04 |
| 12 | GO:0009443: pyridoxal 5'-phosphate salvage | 1.56E-04 |
| 13 | GO:0006659: phosphatidylserine biosynthetic process | 1.56E-04 |
| 14 | GO:0042371: vitamin K biosynthetic process | 1.56E-04 |
| 15 | GO:0051247: positive regulation of protein metabolic process | 1.56E-04 |
| 16 | GO:2000905: negative regulation of starch metabolic process | 1.56E-04 |
| 17 | GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process | 1.56E-04 |
| 18 | GO:0019684: photosynthesis, light reaction | 2.86E-04 |
| 19 | GO:0016024: CDP-diacylglycerol biosynthetic process | 3.29E-04 |
| 20 | GO:0010024: phytochromobilin biosynthetic process | 3.55E-04 |
| 21 | GO:0048586: regulation of long-day photoperiodism, flowering | 5.82E-04 |
| 22 | GO:0006954: inflammatory response | 5.82E-04 |
| 23 | GO:0006788: heme oxidation | 5.82E-04 |
| 24 | GO:0061077: chaperone-mediated protein folding | 7.05E-04 |
| 25 | GO:0006730: one-carbon metabolic process | 7.69E-04 |
| 26 | GO:0016556: mRNA modification | 8.33E-04 |
| 27 | GO:0006168: adenine salvage | 8.33E-04 |
| 28 | GO:2001141: regulation of RNA biosynthetic process | 8.33E-04 |
| 29 | GO:0006166: purine ribonucleoside salvage | 8.33E-04 |
| 30 | GO:0010107: potassium ion import | 1.10E-03 |
| 31 | GO:0006546: glycine catabolic process | 1.10E-03 |
| 32 | GO:0006021: inositol biosynthetic process | 1.10E-03 |
| 33 | GO:0010109: regulation of photosynthesis | 1.10E-03 |
| 34 | GO:2000306: positive regulation of photomorphogenesis | 1.10E-03 |
| 35 | GO:0006109: regulation of carbohydrate metabolic process | 1.10E-03 |
| 36 | GO:0015979: photosynthesis | 1.16E-03 |
| 37 | GO:0009791: post-embryonic development | 1.30E-03 |
| 38 | GO:0046907: intracellular transport | 1.40E-03 |
| 39 | GO:0098719: sodium ion import across plasma membrane | 1.40E-03 |
| 40 | GO:0044209: AMP salvage | 1.40E-03 |
| 41 | GO:0032502: developmental process | 1.48E-03 |
| 42 | GO:0000741: karyogamy | 1.72E-03 |
| 43 | GO:0009228: thiamine biosynthetic process | 1.72E-03 |
| 44 | GO:0006655: phosphatidylglycerol biosynthetic process | 1.72E-03 |
| 45 | GO:0006751: glutathione catabolic process | 1.72E-03 |
| 46 | GO:0010264: myo-inositol hexakisphosphate biosynthetic process | 1.72E-03 |
| 47 | GO:0010027: thylakoid membrane organization | 1.99E-03 |
| 48 | GO:0042372: phylloquinone biosynthetic process | 2.06E-03 |
| 49 | GO:0006458: 'de novo' protein folding | 2.06E-03 |
| 50 | GO:0010189: vitamin E biosynthetic process | 2.06E-03 |
| 51 | GO:0080086: stamen filament development | 2.06E-03 |
| 52 | GO:0042026: protein refolding | 2.06E-03 |
| 53 | GO:0009772: photosynthetic electron transport in photosystem II | 2.42E-03 |
| 54 | GO:0046620: regulation of organ growth | 2.80E-03 |
| 55 | GO:0009690: cytokinin metabolic process | 2.80E-03 |
| 56 | GO:0006605: protein targeting | 2.80E-03 |
| 57 | GO:0055075: potassium ion homeostasis | 2.80E-03 |
| 58 | GO:0048564: photosystem I assembly | 2.80E-03 |
| 59 | GO:0090333: regulation of stomatal closure | 3.63E-03 |
| 60 | GO:0031425: chloroplast RNA processing | 4.06E-03 |
| 61 | GO:0051453: regulation of intracellular pH | 4.06E-03 |
| 62 | GO:0009638: phototropism | 4.06E-03 |
| 63 | GO:1900865: chloroplast RNA modification | 4.06E-03 |
| 64 | GO:0009641: shade avoidance | 4.52E-03 |
| 65 | GO:0006855: drug transmembrane transport | 4.91E-03 |
| 66 | GO:0009089: lysine biosynthetic process via diaminopimelate | 4.99E-03 |
| 67 | GO:0043085: positive regulation of catalytic activity | 4.99E-03 |
| 68 | GO:0006352: DNA-templated transcription, initiation | 4.99E-03 |
| 69 | GO:0009767: photosynthetic electron transport chain | 5.98E-03 |
| 70 | GO:0010143: cutin biosynthetic process | 6.50E-03 |
| 71 | GO:0019853: L-ascorbic acid biosynthetic process | 7.04E-03 |
| 72 | GO:0055114: oxidation-reduction process | 7.60E-03 |
| 73 | GO:0019915: lipid storage | 9.34E-03 |
| 74 | GO:0030245: cellulose catabolic process | 9.96E-03 |
| 75 | GO:0006012: galactose metabolic process | 1.06E-02 |
| 76 | GO:0009561: megagametogenesis | 1.12E-02 |
| 77 | GO:0051028: mRNA transport | 1.19E-02 |
| 78 | GO:0016117: carotenoid biosynthetic process | 1.19E-02 |
| 79 | GO:0006413: translational initiation | 1.30E-02 |
| 80 | GO:0006885: regulation of pH | 1.32E-02 |
| 81 | GO:0006662: glycerol ether metabolic process | 1.32E-02 |
| 82 | GO:0010197: polar nucleus fusion | 1.32E-02 |
| 83 | GO:0048544: recognition of pollen | 1.39E-02 |
| 84 | GO:0006814: sodium ion transport | 1.39E-02 |
| 85 | GO:0009646: response to absence of light | 1.39E-02 |
| 86 | GO:0008654: phospholipid biosynthetic process | 1.46E-02 |
| 87 | GO:0010090: trichome morphogenesis | 1.68E-02 |
| 88 | GO:0010029: regulation of seed germination | 2.07E-02 |
| 89 | GO:0006974: cellular response to DNA damage stimulus | 2.16E-02 |
| 90 | GO:0009817: defense response to fungus, incompatible interaction | 2.41E-02 |
| 91 | GO:0048366: leaf development | 2.55E-02 |
| 92 | GO:0009407: toxin catabolic process | 2.58E-02 |
| 93 | GO:0045087: innate immune response | 2.85E-02 |
| 94 | GO:0016051: carbohydrate biosynthetic process | 2.85E-02 |
| 95 | GO:0034599: cellular response to oxidative stress | 2.94E-02 |
| 96 | GO:0006839: mitochondrial transport | 3.13E-02 |
| 97 | GO:0009926: auxin polar transport | 3.42E-02 |
| 98 | GO:0051707: response to other organism | 3.42E-02 |
| 99 | GO:0009636: response to toxic substance | 3.71E-02 |
| 100 | GO:0016042: lipid catabolic process | 3.85E-02 |
| 101 | GO:0006397: mRNA processing | 4.13E-02 |
| 102 | GO:0006486: protein glycosylation | 4.22E-02 |
| 103 | GO:0009585: red, far-red light phototransduction | 4.22E-02 |
| 104 | GO:0009909: regulation of flower development | 4.54E-02 |
| 105 | GO:0043086: negative regulation of catalytic activity | 4.75E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity | 0.00E+00 |
| 2 | GO:0010349: L-galactose dehydrogenase activity | 0.00E+00 |
| 3 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 4 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
| 5 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.93E-05 |
| 6 | GO:0005528: FK506 binding | 2.63E-05 |
| 7 | GO:0004033: aldo-keto reductase (NADP) activity | 1.13E-04 |
| 8 | GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity | 1.56E-04 |
| 9 | GO:0004512: inositol-3-phosphate synthase activity | 3.55E-04 |
| 10 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 3.55E-04 |
| 11 | GO:0003839: gamma-glutamylcyclotransferase activity | 3.55E-04 |
| 12 | GO:0004326: tetrahydrofolylpolyglutamate synthase activity | 3.55E-04 |
| 13 | GO:0004047: aminomethyltransferase activity | 3.55E-04 |
| 14 | GO:0070402: NADPH binding | 5.82E-04 |
| 15 | GO:0015462: ATPase-coupled protein transmembrane transporter activity | 5.82E-04 |
| 16 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 6.13E-04 |
| 17 | GO:0003999: adenine phosphoribosyltransferase activity | 8.33E-04 |
| 18 | GO:0004392: heme oxygenase (decyclizing) activity | 1.10E-03 |
| 19 | GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity | 1.10E-03 |
| 20 | GO:0004659: prenyltransferase activity | 1.10E-03 |
| 21 | GO:0001053: plastid sigma factor activity | 1.10E-03 |
| 22 | GO:0016987: sigma factor activity | 1.10E-03 |
| 23 | GO:0048038: quinone binding | 1.39E-03 |
| 24 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 1.40E-03 |
| 25 | GO:0004462: lactoylglutathione lyase activity | 1.72E-03 |
| 26 | GO:0015081: sodium ion transmembrane transporter activity | 1.72E-03 |
| 27 | GO:0008200: ion channel inhibitor activity | 1.72E-03 |
| 28 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 1.72E-03 |
| 29 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 1.72E-03 |
| 30 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 2.06E-03 |
| 31 | GO:0015238: drug transmembrane transporter activity | 2.72E-03 |
| 32 | GO:0008135: translation factor activity, RNA binding | 3.21E-03 |
| 33 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 3.57E-03 |
| 34 | GO:0005215: transporter activity | 3.75E-03 |
| 35 | GO:0008047: enzyme activator activity | 4.52E-03 |
| 36 | GO:0015020: glucuronosyltransferase activity | 4.52E-03 |
| 37 | GO:0044183: protein binding involved in protein folding | 4.99E-03 |
| 38 | GO:0015386: potassium:proton antiporter activity | 4.99E-03 |
| 39 | GO:0008378: galactosyltransferase activity | 5.48E-03 |
| 40 | GO:0004089: carbonate dehydratase activity | 5.98E-03 |
| 41 | GO:0031072: heat shock protein binding | 5.98E-03 |
| 42 | GO:0008266: poly(U) RNA binding | 6.50E-03 |
| 43 | GO:0051082: unfolded protein binding | 8.06E-03 |
| 44 | GO:0004857: enzyme inhibitor activity | 8.16E-03 |
| 45 | GO:0016746: transferase activity, transferring acyl groups | 8.30E-03 |
| 46 | GO:0005345: purine nucleobase transmembrane transporter activity | 8.74E-03 |
| 47 | GO:0005509: calcium ion binding | 1.05E-02 |
| 48 | GO:0030570: pectate lyase activity | 1.06E-02 |
| 49 | GO:0008810: cellulase activity | 1.06E-02 |
| 50 | GO:0016829: lyase activity | 1.09E-02 |
| 51 | GO:0047134: protein-disulfide reductase activity | 1.19E-02 |
| 52 | GO:0005199: structural constituent of cell wall | 1.32E-02 |
| 53 | GO:0015297: antiporter activity | 1.33E-02 |
| 54 | GO:0004791: thioredoxin-disulfide reductase activity | 1.39E-02 |
| 55 | GO:0003743: translation initiation factor activity | 1.63E-02 |
| 56 | GO:0015385: sodium:proton antiporter activity | 1.68E-02 |
| 57 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.68E-02 |
| 58 | GO:0016791: phosphatase activity | 1.76E-02 |
| 59 | GO:0008483: transaminase activity | 1.84E-02 |
| 60 | GO:0008375: acetylglucosaminyltransferase activity | 2.16E-02 |
| 61 | GO:0016788: hydrolase activity, acting on ester bonds | 2.21E-02 |
| 62 | GO:0004721: phosphoprotein phosphatase activity | 2.24E-02 |
| 63 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 2.32E-02 |
| 64 | GO:0003746: translation elongation factor activity | 2.85E-02 |
| 65 | GO:0052689: carboxylic ester hydrolase activity | 2.97E-02 |
| 66 | GO:0004364: glutathione transferase activity | 3.32E-02 |
| 67 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 4.22E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 9.21E-12 |
| 2 | GO:0009543: chloroplast thylakoid lumen | 3.64E-11 |
| 3 | GO:0009570: chloroplast stroma | 5.85E-10 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 2.53E-08 |
| 5 | GO:0009579: thylakoid | 3.54E-08 |
| 6 | GO:0009941: chloroplast envelope | 2.34E-07 |
| 7 | GO:0009654: photosystem II oxygen evolving complex | 6.40E-07 |
| 8 | GO:0019898: extrinsic component of membrane | 3.45E-06 |
| 9 | GO:0031977: thylakoid lumen | 3.60E-05 |
| 10 | GO:0009344: nitrite reductase complex [NAD(P)H] | 1.56E-04 |
| 11 | GO:0010319: stromule | 1.56E-04 |
| 12 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.73E-04 |
| 13 | GO:0009534: chloroplast thylakoid | 2.80E-04 |
| 14 | GO:0030095: chloroplast photosystem II | 4.23E-04 |
| 15 | GO:0031969: chloroplast membrane | 9.50E-04 |
| 16 | GO:0016020: membrane | 1.93E-02 |
| 17 | GO:0030529: intracellular ribonucleoprotein complex | 1.99E-02 |
| 18 | GO:0005643: nuclear pore | 2.41E-02 |
| 19 | GO:0048046: apoplast | 2.91E-02 |
| 20 | GO:0016021: integral component of membrane | 4.83E-02 |