GO Enrichment Analysis of Co-expressed Genes with
AT3G15680
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009854: oxidative photosynthetic carbon pathway | 9.07E-06 |
| 2 | GO:0015995: chlorophyll biosynthetic process | 1.99E-05 |
| 3 | GO:0071482: cellular response to light stimulus | 2.16E-05 |
| 4 | GO:0051775: response to redox state | 4.60E-05 |
| 5 | GO:0046467: membrane lipid biosynthetic process | 4.60E-05 |
| 6 | GO:0000481: maturation of 5S rRNA | 4.60E-05 |
| 7 | GO:0042371: vitamin K biosynthetic process | 4.60E-05 |
| 8 | GO:0071461: cellular response to redox state | 4.60E-05 |
| 9 | GO:0034337: RNA folding | 4.60E-05 |
| 10 | GO:0005975: carbohydrate metabolic process | 4.97E-05 |
| 11 | GO:0051645: Golgi localization | 1.13E-04 |
| 12 | GO:0080005: photosystem stoichiometry adjustment | 1.13E-04 |
| 13 | GO:0010541: acropetal auxin transport | 1.13E-04 |
| 14 | GO:0060151: peroxisome localization | 1.13E-04 |
| 15 | GO:0051646: mitochondrion localization | 1.95E-04 |
| 16 | GO:0010160: formation of animal organ boundary | 1.95E-04 |
| 17 | GO:0090436: leaf pavement cell development | 1.95E-04 |
| 18 | GO:0005977: glycogen metabolic process | 1.95E-04 |
| 19 | GO:0043481: anthocyanin accumulation in tissues in response to UV light | 2.85E-04 |
| 20 | GO:0010731: protein glutathionylation | 2.85E-04 |
| 21 | GO:2001141: regulation of RNA biosynthetic process | 2.85E-04 |
| 22 | GO:0006107: oxaloacetate metabolic process | 2.85E-04 |
| 23 | GO:2000122: negative regulation of stomatal complex development | 3.84E-04 |
| 24 | GO:0006734: NADH metabolic process | 3.84E-04 |
| 25 | GO:0010021: amylopectin biosynthetic process | 3.84E-04 |
| 26 | GO:0010037: response to carbon dioxide | 3.84E-04 |
| 27 | GO:0015976: carbon utilization | 3.84E-04 |
| 28 | GO:0043097: pyrimidine nucleoside salvage | 4.88E-04 |
| 29 | GO:0006206: pyrimidine nucleobase metabolic process | 5.98E-04 |
| 30 | GO:0060918: auxin transport | 5.98E-04 |
| 31 | GO:0050665: hydrogen peroxide biosynthetic process | 5.98E-04 |
| 32 | GO:0010019: chloroplast-nucleus signaling pathway | 7.13E-04 |
| 33 | GO:0015979: photosynthesis | 7.78E-04 |
| 34 | GO:0009645: response to low light intensity stimulus | 8.33E-04 |
| 35 | GO:0006400: tRNA modification | 8.33E-04 |
| 36 | GO:0009690: cytokinin metabolic process | 9.57E-04 |
| 37 | GO:0032508: DNA duplex unwinding | 9.57E-04 |
| 38 | GO:0016559: peroxisome fission | 9.57E-04 |
| 39 | GO:0010204: defense response signaling pathway, resistance gene-independent | 1.09E-03 |
| 40 | GO:0006754: ATP biosynthetic process | 1.22E-03 |
| 41 | GO:0043085: positive regulation of catalytic activity | 1.66E-03 |
| 42 | GO:0006352: DNA-templated transcription, initiation | 1.66E-03 |
| 43 | GO:0018119: peptidyl-cysteine S-nitrosylation | 1.66E-03 |
| 44 | GO:0008361: regulation of cell size | 1.81E-03 |
| 45 | GO:0030048: actin filament-based movement | 1.98E-03 |
| 46 | GO:0006108: malate metabolic process | 1.98E-03 |
| 47 | GO:0010020: chloroplast fission | 2.14E-03 |
| 48 | GO:0019253: reductive pentose-phosphate cycle | 2.14E-03 |
| 49 | GO:0010207: photosystem II assembly | 2.14E-03 |
| 50 | GO:0010540: basipetal auxin transport | 2.14E-03 |
| 51 | GO:0048467: gynoecium development | 2.14E-03 |
| 52 | GO:0009768: photosynthesis, light harvesting in photosystem I | 2.85E-03 |
| 53 | GO:0030245: cellulose catabolic process | 3.23E-03 |
| 54 | GO:0048443: stamen development | 3.63E-03 |
| 55 | GO:0042631: cellular response to water deprivation | 4.04E-03 |
| 56 | GO:0010154: fruit development | 4.25E-03 |
| 57 | GO:0009958: positive gravitropism | 4.25E-03 |
| 58 | GO:0006520: cellular amino acid metabolic process | 4.25E-03 |
| 59 | GO:0009791: post-embryonic development | 4.68E-03 |
| 60 | GO:0019252: starch biosynthetic process | 4.68E-03 |
| 61 | GO:0032502: developmental process | 5.13E-03 |
| 62 | GO:0010090: trichome morphogenesis | 5.37E-03 |
| 63 | GO:1901657: glycosyl compound metabolic process | 5.37E-03 |
| 64 | GO:0009639: response to red or far red light | 5.60E-03 |
| 65 | GO:0016311: dephosphorylation | 7.34E-03 |
| 66 | GO:0016049: cell growth | 7.34E-03 |
| 67 | GO:0018298: protein-chromophore linkage | 7.60E-03 |
| 68 | GO:0009409: response to cold | 7.81E-03 |
| 69 | GO:0010218: response to far red light | 8.14E-03 |
| 70 | GO:0048527: lateral root development | 8.41E-03 |
| 71 | GO:0010119: regulation of stomatal movement | 8.41E-03 |
| 72 | GO:0009637: response to blue light | 8.96E-03 |
| 73 | GO:0009853: photorespiration | 8.96E-03 |
| 74 | GO:0034599: cellular response to oxidative stress | 9.25E-03 |
| 75 | GO:0006099: tricarboxylic acid cycle | 9.25E-03 |
| 76 | GO:0009640: photomorphogenesis | 1.07E-02 |
| 77 | GO:0009926: auxin polar transport | 1.07E-02 |
| 78 | GO:0009644: response to high light intensity | 1.13E-02 |
| 79 | GO:0009636: response to toxic substance | 1.16E-02 |
| 80 | GO:0009735: response to cytokinin | 1.25E-02 |
| 81 | GO:0009058: biosynthetic process | 2.07E-02 |
| 82 | GO:0006413: translational initiation | 2.38E-02 |
| 83 | GO:0007623: circadian rhythm | 2.50E-02 |
| 84 | GO:0042742: defense response to bacterium | 2.77E-02 |
| 85 | GO:0009658: chloroplast organization | 3.42E-02 |
| 86 | GO:0006869: lipid transport | 4.83E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0036361: racemase activity, acting on amino acids and derivatives | 0.00E+00 |
| 2 | GO:0008974: phosphoribulokinase activity | 0.00E+00 |
| 3 | GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives | 0.00E+00 |
| 4 | GO:0008465: glycerate dehydrogenase activity | 0.00E+00 |
| 5 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 6 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 7 | GO:0046554: malate dehydrogenase (NADP+) activity | 0.00E+00 |
| 8 | GO:0008746: NAD(P)+ transhydrogenase activity | 4.60E-05 |
| 9 | GO:0004328: formamidase activity | 4.60E-05 |
| 10 | GO:0046906: tetrapyrrole binding | 4.60E-05 |
| 11 | GO:0004565: beta-galactosidase activity | 6.58E-05 |
| 12 | GO:0019156: isoamylase activity | 1.13E-04 |
| 13 | GO:0016851: magnesium chelatase activity | 2.85E-04 |
| 14 | GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 2.85E-04 |
| 15 | GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity | 2.85E-04 |
| 16 | GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | 2.85E-04 |
| 17 | GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity | 2.85E-04 |
| 18 | GO:0016987: sigma factor activity | 3.84E-04 |
| 19 | GO:0008891: glycolate oxidase activity | 3.84E-04 |
| 20 | GO:0001053: plastid sigma factor activity | 3.84E-04 |
| 21 | GO:0004556: alpha-amylase activity | 5.98E-04 |
| 22 | GO:0016615: malate dehydrogenase activity | 5.98E-04 |
| 23 | GO:0003993: acid phosphatase activity | 7.05E-04 |
| 24 | GO:0030060: L-malate dehydrogenase activity | 7.13E-04 |
| 25 | GO:0004849: uridine kinase activity | 7.13E-04 |
| 26 | GO:0019899: enzyme binding | 8.33E-04 |
| 27 | GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism | 1.22E-03 |
| 28 | GO:0016887: ATPase activity | 1.84E-03 |
| 29 | GO:0010329: auxin efflux transmembrane transporter activity | 1.98E-03 |
| 30 | GO:0004089: carbonate dehydratase activity | 1.98E-03 |
| 31 | GO:0008266: poly(U) RNA binding | 2.14E-03 |
| 32 | GO:0003774: motor activity | 2.14E-03 |
| 33 | GO:0031409: pigment binding | 2.49E-03 |
| 34 | GO:0005528: FK506 binding | 2.67E-03 |
| 35 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 3.09E-03 |
| 36 | GO:0008810: cellulase activity | 3.43E-03 |
| 37 | GO:0042802: identical protein binding | 3.47E-03 |
| 38 | GO:0010181: FMN binding | 4.47E-03 |
| 39 | GO:0016168: chlorophyll binding | 6.57E-03 |
| 40 | GO:0102483: scopolin beta-glucosidase activity | 7.08E-03 |
| 41 | GO:0008422: beta-glucosidase activity | 9.53E-03 |
| 42 | GO:0004364: glutathione transferase activity | 1.04E-02 |
| 43 | GO:0008289: lipid binding | 1.07E-02 |
| 44 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.19E-02 |
| 45 | GO:0051287: NAD binding | 1.23E-02 |
| 46 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.32E-02 |
| 47 | GO:0003779: actin binding | 1.66E-02 |
| 48 | GO:0005516: calmodulin binding | 2.06E-02 |
| 49 | GO:0008017: microtubule binding | 2.59E-02 |
| 50 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 2.97E-02 |
| 51 | GO:0005524: ATP binding | 3.11E-02 |
| 52 | GO:0004601: peroxidase activity | 3.42E-02 |
| 53 | GO:0016788: hydrolase activity, acting on ester bonds | 3.46E-02 |
| 54 | GO:0016491: oxidoreductase activity | 3.65E-02 |
| 55 | GO:0052689: carboxylic ester hydrolase activity | 4.27E-02 |
| 56 | GO:0042803: protein homodimerization activity | 4.68E-02 |
| 57 | GO:0004722: protein serine/threonine phosphatase activity | 4.83E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 2.63E-10 |
| 2 | GO:0009782: photosystem I antenna complex | 4.60E-05 |
| 3 | GO:0009941: chloroplast envelope | 1.31E-04 |
| 4 | GO:0005773: vacuole | 1.79E-04 |
| 5 | GO:0010007: magnesium chelatase complex | 1.95E-04 |
| 6 | GO:0009570: chloroplast stroma | 3.01E-04 |
| 7 | GO:0005777: peroxisome | 4.14E-04 |
| 8 | GO:0009535: chloroplast thylakoid membrane | 7.06E-04 |
| 9 | GO:0016459: myosin complex | 1.51E-03 |
| 10 | GO:0048046: apoplast | 1.64E-03 |
| 11 | GO:0032040: small-subunit processome | 1.81E-03 |
| 12 | GO:0030076: light-harvesting complex | 2.31E-03 |
| 13 | GO:0009522: photosystem I | 4.47E-03 |
| 14 | GO:0031969: chloroplast membrane | 5.21E-03 |
| 15 | GO:0010319: stromule | 5.84E-03 |
| 16 | GO:0009707: chloroplast outer membrane | 7.60E-03 |
| 17 | GO:0031977: thylakoid lumen | 1.01E-02 |
| 18 | GO:0009579: thylakoid | 1.64E-02 |
| 19 | GO:0010287: plastoglobule | 1.92E-02 |
| 20 | GO:0009543: chloroplast thylakoid lumen | 1.99E-02 |
| 21 | GO:0046658: anchored component of plasma membrane | 3.06E-02 |