Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G15354

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0098586: cellular response to virus0.00E+00
2GO:0010203: response to very low fluence red light stimulus0.00E+00
3GO:0017009: protein-phycocyanobilin linkage0.00E+00
4GO:0015801: aromatic amino acid transport3.50E-05
5GO:0015798: myo-inositol transport3.50E-05
6GO:0010201: response to continuous far red light stimulus by the high-irradiance response system3.50E-05
7GO:0043087: regulation of GTPase activity3.50E-05
8GO:0046741: transport of virus in host, tissue to tissue8.78E-05
9GO:0000256: allantoin catabolic process8.78E-05
10GO:0000913: preprophase band assembly1.52E-04
11GO:0031022: nuclear migration along microfilament1.52E-04
12GO:0010136: ureide catabolic process1.52E-04
13GO:0017006: protein-tetrapyrrole linkage1.52E-04
14GO:0007018: microtubule-based movement1.74E-04
15GO:0009584: detection of visible light2.25E-04
16GO:0006145: purine nucleobase catabolic process2.25E-04
17GO:0043572: plastid fission2.25E-04
18GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly2.25E-04
19GO:0000910: cytokinesis2.78E-04
20GO:0051322: anaphase3.05E-04
21GO:0071483: cellular response to blue light3.05E-04
22GO:0009904: chloroplast accumulation movement3.89E-04
23GO:0009920: cell plate formation involved in plant-type cell wall biogenesis4.78E-04
24GO:0010190: cytochrome b6f complex assembly4.78E-04
25GO:0009612: response to mechanical stimulus5.70E-04
26GO:0017148: negative regulation of translation5.70E-04
27GO:0009903: chloroplast avoidance movement5.70E-04
28GO:0009854: oxidative photosynthetic carbon pathway5.70E-04
29GO:0009645: response to low light intensity stimulus6.66E-04
30GO:0010161: red light signaling pathway6.66E-04
31GO:0009231: riboflavin biosynthetic process7.68E-04
32GO:0071482: cellular response to light stimulus8.71E-04
33GO:0046685: response to arsenic-containing substance9.78E-04
34GO:0009821: alkaloid biosynthetic process9.78E-04
35GO:0034765: regulation of ion transmembrane transport9.78E-04
36GO:0009638: phototropism1.09E-03
37GO:0006352: DNA-templated transcription, initiation1.32E-03
38GO:0010020: chloroplast fission1.70E-03
39GO:0010207: photosystem II assembly1.70E-03
40GO:0090351: seedling development1.84E-03
41GO:0006833: water transport1.97E-03
42GO:0051302: regulation of cell division2.26E-03
43GO:0003333: amino acid transmembrane transport2.41E-03
44GO:0031348: negative regulation of defense response2.56E-03
45GO:0009789: positive regulation of abscisic acid-activated signaling pathway3.03E-03
46GO:0042391: regulation of membrane potential3.20E-03
47GO:0034220: ion transmembrane transport3.20E-03
48GO:0010197: polar nucleus fusion3.36E-03
49GO:0000302: response to reactive oxygen species3.88E-03
50GO:0016032: viral process4.06E-03
51GO:0009630: gravitropism4.06E-03
52GO:0071805: potassium ion transmembrane transport4.60E-03
53GO:0016126: sterol biosynthetic process4.99E-03
54GO:0010411: xyloglucan metabolic process5.58E-03
55GO:0018298: protein-chromophore linkage5.99E-03
56GO:0010218: response to far red light6.40E-03
57GO:0006865: amino acid transport6.83E-03
58GO:0009853: photorespiration7.05E-03
59GO:0045087: innate immune response7.05E-03
60GO:0009640: photomorphogenesis8.41E-03
61GO:0042546: cell wall biogenesis8.65E-03
62GO:0009737: response to abscisic acid8.91E-03
63GO:0009585: red, far-red light phototransduction1.04E-02
64GO:0055085: transmembrane transport1.22E-02
65GO:0009058: biosynthetic process1.62E-02
66GO:0006413: translational initiation1.86E-02
67GO:0071555: cell wall organization1.96E-02
68GO:0007166: cell surface receptor signaling pathway2.15E-02
69GO:0009826: unidimensional cell growth2.60E-02
70GO:0009658: chloroplast organization2.67E-02
71GO:0006810: transport2.88E-02
72GO:0007049: cell cycle2.89E-02
73GO:0080167: response to karrikin3.11E-02
74GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway3.19E-02
75GO:0010200: response to chitin3.19E-02
76GO:0044550: secondary metabolite biosynthetic process3.31E-02
77GO:0055114: oxidation-reduction process3.51E-02
78GO:0009753: response to jasmonic acid4.32E-02
79GO:0008152: metabolic process4.41E-02
80GO:0009793: embryo development ending in seed dormancy4.52E-02
RankGO TermAdjusted P value
1GO:0071522: ureidoglycine aminohydrolase activity0.00E+00
2GO:0016618: hydroxypyruvate reductase activity3.50E-05
3GO:0031516: far-red light photoreceptor activity3.50E-05
4GO:0015173: aromatic amino acid transmembrane transporter activity8.78E-05
5GO:0005366: myo-inositol:proton symporter activity8.78E-05
6GO:0009883: red or far-red light photoreceptor activity8.78E-05
7GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity8.78E-05
8GO:0004180: carboxypeptidase activity1.52E-04
9GO:0003935: GTP cyclohydrolase II activity1.52E-04
10GO:0003955: NAD(P)H dehydrogenase (quinone) activity1.52E-04
11GO:0008020: G-protein coupled photoreceptor activity1.52E-04
12GO:0030267: glyoxylate reductase (NADP) activity1.52E-04
13GO:0008430: selenium binding1.52E-04
14GO:0008017: microtubule binding1.91E-04
15GO:0048038: quinone binding2.01E-04
16GO:0016987: sigma factor activity3.05E-04
17GO:0004506: squalene monooxygenase activity3.05E-04
18GO:0001053: plastid sigma factor activity3.05E-04
19GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor3.05E-04
20GO:0005275: amine transmembrane transporter activity3.89E-04
21GO:0005242: inward rectifier potassium channel activity5.70E-04
22GO:0043022: ribosome binding7.68E-04
23GO:0003777: microtubule motor activity9.06E-04
24GO:0016844: strictosidine synthase activity1.09E-03
25GO:0004673: protein histidine kinase activity1.20E-03
26GO:0031072: heat shock protein binding1.57E-03
27GO:0000155: phosphorelay sensor kinase activity1.57E-03
28GO:0015144: carbohydrate transmembrane transporter activity1.69E-03
29GO:0004190: aspartic-type endopeptidase activity1.84E-03
30GO:0005351: sugar:proton symporter activity1.91E-03
31GO:0042802: identical protein binding2.46E-03
32GO:0005525: GTP binding2.63E-03
33GO:0030551: cyclic nucleotide binding3.20E-03
34GO:0005249: voltage-gated potassium channel activity3.20E-03
35GO:0016762: xyloglucan:xyloglucosyl transferase activity3.88E-03
36GO:0015250: water channel activity4.99E-03
37GO:0016798: hydrolase activity, acting on glycosyl bonds5.58E-03
38GO:0008236: serine-type peptidase activity5.78E-03
39GO:0005096: GTPase activator activity6.19E-03
40GO:0016887: ATPase activity8.41E-03
41GO:0035091: phosphatidylinositol binding8.88E-03
42GO:0051287: NAD binding9.61E-03
43GO:0003899: DNA-directed 5'-3' RNA polymerase activity1.04E-02
44GO:0051082: unfolded protein binding1.33E-02
45GO:0016829: lyase activity1.65E-02
46GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.86E-02
47GO:0008194: UDP-glycosyltransferase activity2.12E-02
48GO:0003743: translation initiation factor activity2.19E-02
49GO:0016491: oxidoreductase activity2.58E-02
50GO:0005515: protein binding2.63E-02
51GO:0016788: hydrolase activity, acting on ester bonds2.71E-02
52GO:0004672: protein kinase activity2.88E-02
53GO:0003729: mRNA binding2.92E-02
54GO:0050660: flavin adenine dinucleotide binding2.96E-02
55GO:0008233: peptidase activity3.08E-02
56GO:0052689: carboxylic ester hydrolase activity3.34E-02
57GO:0004871: signal transducer activity3.66E-02
58GO:0042803: protein homodimerization activity3.66E-02
59GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen3.74E-02
60GO:0003924: GTPase activity4.11E-02
RankGO TermAdjusted P value
1GO:0009574: preprophase band4.39E-05
2GO:0009507: chloroplast8.27E-05
3GO:0005887: integral component of plasma membrane1.18E-04
4GO:0005871: kinesin complex1.36E-04
5GO:0030660: Golgi-associated vesicle membrane3.05E-04
6GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane3.05E-04
7GO:0005874: microtubule4.07E-04
8GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane7.68E-04
9GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)9.78E-04
10GO:0016604: nuclear body1.09E-03
11GO:0005765: lysosomal membrane1.32E-03
12GO:0009524: phragmoplast1.50E-03
13GO:0009504: cell plate3.70E-03
14GO:0005694: chromosome4.06E-03
15GO:0009536: plastid4.43E-03
16GO:0016020: membrane4.79E-03
17GO:0009707: chloroplast outer membrane5.99E-03
18GO:0005773: vacuole7.13E-03
19GO:0005819: spindle7.49E-03
20GO:0009535: chloroplast thylakoid membrane9.49E-03
21GO:0016607: nuclear speck1.19E-02
22GO:0010008: endosome membrane1.19E-02
23GO:0009706: chloroplast inner membrane1.33E-02
24GO:0005623: cell1.59E-02
25GO:0009705: plant-type vacuole membrane1.96E-02
26GO:0046658: anchored component of plasma membrane2.39E-02
27GO:0005783: endoplasmic reticulum3.97E-02
28GO:0016021: integral component of membrane5.00E-02
<
Gene type



Gene DE type