co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G14670

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010059: positive regulation of atrichoblast fate specification	0.00E+00
2	GO:0070125: mitochondrial translational elongation	0.00E+00
3	GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate	0.00E+00
4	GO:0090071: negative regulation of ribosome biogenesis	0.00E+00
5	GO:0042372: phylloquinone biosynthetic process	2.36E-05
6	GO:0048437: floral organ development	3.21E-05
7	GO:1900865: chloroplast RNA modification	8.11E-05
8	GO:0070509: calcium ion import	8.25E-05
9	GO:0010063: positive regulation of trichoblast fate specification	8.25E-05
10	GO:0010480: microsporocyte differentiation	8.25E-05
11	GO:0042759: long-chain fatty acid biosynthetic process	8.25E-05
12	GO:0042371: vitamin K biosynthetic process	8.25E-05
13	GO:1902458: positive regulation of stomatal opening	8.25E-05
14	GO:2000012: regulation of auxin polar transport	1.54E-04
15	GO:0010020: chloroplast fission	1.75E-04
16	GO:1900871: chloroplast mRNA modification	1.97E-04
17	GO:0080009: mRNA methylation	1.97E-04
18	GO:1903426: regulation of reactive oxygen species biosynthetic process	1.97E-04
19	GO:0016556: mRNA modification	4.75E-04
20	GO:0043572: plastid fission	4.75E-04
21	GO:0010071: root meristem specification	4.75E-04
22	GO:0010305: leaf vascular tissue pattern formation	4.96E-04
23	GO:0022622: root system development	6.32E-04
24	GO:0040008: regulation of growth	7.23E-04
25	GO:0009828: plant-type cell wall loosening	7.32E-04
26	GO:0009793: embryo development ending in seed dormancy	7.40E-04
27	GO:0010236: plastoquinone biosynthetic process	8.00E-04
28	GO:0045038: protein import into chloroplast thylakoid membrane	8.00E-04
29	GO:0010027: thylakoid membrane organization	8.68E-04
30	GO:0007166: cell surface receptor signaling pathway	9.03E-04
31	GO:0016554: cytidine to uridine editing	9.77E-04
32	GO:0042793: transcription from plastid promoter	9.77E-04
33	GO:1901259: chloroplast rRNA processing	1.16E-03
34	GO:0017148: negative regulation of translation	1.16E-03
35	GO:0009658: chloroplast organization	1.31E-03
36	GO:0010444: guard mother cell differentiation	1.36E-03
37	GO:0015693: magnesium ion transport	1.36E-03
38	GO:0032880: regulation of protein localization	1.36E-03
39	GO:0048528: post-embryonic root development	1.36E-03
40	GO:0009772: photosynthetic electron transport in photosystem II	1.36E-03
41	GO:2000070: regulation of response to water deprivation	1.57E-03
42	GO:0007186: G-protein coupled receptor signaling pathway	1.79E-03
43	GO:0015996: chlorophyll catabolic process	1.79E-03
44	GO:0048507: meristem development	2.02E-03
45	GO:0046916: cellular transition metal ion homeostasis	2.02E-03
46	GO:0000902: cell morphogenesis	2.02E-03
47	GO:0009664: plant-type cell wall organization	2.24E-03
48	GO:0048229: gametophyte development	2.77E-03
49	GO:0045037: protein import into chloroplast stroma	3.03E-03
50	GO:0050826: response to freezing	3.31E-03
51	GO:0010075: regulation of meristem growth	3.31E-03
52	GO:0010207: photosystem II assembly	3.59E-03
53	GO:0009934: regulation of meristem structural organization	3.59E-03
54	GO:0080188: RNA-directed DNA methylation	3.88E-03
55	GO:0010030: positive regulation of seed germination	3.88E-03
56	GO:0070588: calcium ion transmembrane transport	3.88E-03
57	GO:0010025: wax biosynthetic process	4.18E-03
58	GO:0009790: embryo development	4.95E-03
59	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	5.78E-03
60	GO:0009451: RNA modification	5.98E-03
61	GO:0042127: regulation of cell proliferation	6.13E-03
62	GO:0008284: positive regulation of cell proliferation	6.48E-03
63	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	6.48E-03
64	GO:0080022: primary root development	6.83E-03
65	GO:0048653: anther development	6.83E-03
66	GO:0042631: cellular response to water deprivation	6.83E-03
67	GO:0009958: positive gravitropism	7.20E-03
68	GO:0010182: sugar mediated signaling pathway	7.20E-03
69	GO:0009826: unidimensional cell growth	8.71E-03
70	GO:0016032: viral process	8.73E-03
71	GO:0006464: cellular protein modification process	9.53E-03
72	GO:0048366: leaf development	1.07E-02
73	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.16E-02
74	GO:0048481: plant ovule development	1.30E-02
75	GO:0000160: phosphorelay signal transduction system	1.35E-02
76	GO:0048527: lateral root development	1.44E-02
77	GO:0009910: negative regulation of flower development	1.44E-02
78	GO:0045087: innate immune response	1.54E-02
79	GO:0016042: lipid catabolic process	1.62E-02
80	GO:0030001: metal ion transport	1.69E-02
81	GO:0006397: mRNA processing	1.73E-02
82	GO:0009640: photomorphogenesis	1.84E-02
83	GO:0006364: rRNA processing	2.28E-02
84	GO:0009736: cytokinin-activated signaling pathway	2.28E-02
85	GO:0009734: auxin-activated signaling pathway	2.34E-02
86	GO:0006468: protein phosphorylation	2.36E-02
87	GO:0048367: shoot system development	2.62E-02
88	GO:0009908: flower development	2.67E-02
89	GO:0009742: brassinosteroid mediated signaling pathway	3.05E-02
90	GO:0006457: protein folding	3.82E-02

Rank	GO Term	Adjusted P value
1	GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity	0.00E+00
2	GO:0008756: o-succinylbenzoate-CoA ligase activity	0.00E+00
3	GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity	8.25E-05
4	GO:0031072: heat shock protein binding	1.54E-04
5	GO:0008805: carbon-monoxide oxygenase activity	1.97E-04
6	GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity	1.97E-04
7	GO:0004103: choline kinase activity	1.97E-04
8	GO:0017118: lipoyltransferase activity	1.97E-04
9	GO:0004176: ATP-dependent peptidase activity	3.03E-04
10	GO:0016805: dipeptidase activity	3.29E-04
11	GO:0004180: carboxypeptidase activity	3.29E-04
12	GO:0043023: ribosomal large subunit binding	4.75E-04
13	GO:0004519: endonuclease activity	5.20E-04
14	GO:0004659: prenyltransferase activity	6.32E-04
15	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	7.01E-04
16	GO:0008237: metallopeptidase activity	7.76E-04
17	GO:0003723: RNA binding	8.03E-04
18	GO:0016208: AMP binding	9.77E-04
19	GO:0046914: transition metal ion binding	1.79E-03
20	GO:0015095: magnesium ion transmembrane transporter activity	3.31E-03
21	GO:0005262: calcium channel activity	3.31E-03
22	GO:0051082: unfolded protein binding	3.40E-03
23	GO:0008266: poly(U) RNA binding	3.59E-03
24	GO:0008083: growth factor activity	3.59E-03
25	GO:0008146: sulfotransferase activity	3.88E-03
26	GO:0005528: FK506 binding	4.48E-03
27	GO:0016887: ATPase activity	4.88E-03
28	GO:0033612: receptor serine/threonine kinase binding	5.12E-03
29	GO:0008408: 3'-5' exonuclease activity	5.12E-03
30	GO:0003756: protein disulfide isomerase activity	6.13E-03
31	GO:0003727: single-stranded RNA binding	6.13E-03
32	GO:0004527: exonuclease activity	7.20E-03
33	GO:0008080: N-acetyltransferase activity	7.20E-03
34	GO:0000156: phosphorelay response regulator activity	9.12E-03
35	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	9.94E-03
36	GO:0005524: ATP binding	1.01E-02
37	GO:0016597: amino acid binding	1.04E-02
38	GO:0052689: carboxylic ester hydrolase activity	1.24E-02
39	GO:0004222: metalloendopeptidase activity	1.39E-02
40	GO:0003746: translation elongation factor activity	1.54E-02
41	GO:0003697: single-stranded DNA binding	1.54E-02
42	GO:0035091: phosphatidylinositol binding	1.95E-02
43	GO:0043621: protein self-association	1.95E-02
44	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.05E-02
45	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	2.28E-02
46	GO:0003777: microtubule motor activity	2.45E-02
47	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	2.62E-02
48	GO:0008017: microtubule binding	4.46E-02
49	GO:0005525: GTP binding	4.83E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	2.89E-11
2	GO:0009941: chloroplast envelope	8.97E-07
3	GO:0009508: plastid chromosome	1.54E-04
4	GO:0031357: integral component of chloroplast inner membrane	1.97E-04
5	GO:0009528: plastid inner membrane	3.29E-04
6	GO:0009706: chloroplast inner membrane	3.84E-04
7	GO:0042646: plastid nucleoid	4.75E-04
8	GO:0009527: plastid outer membrane	6.32E-04
9	GO:0009295: nucleoid	7.76E-04
10	GO:0010319: stromule	7.76E-04
11	GO:0005655: nucleolar ribonuclease P complex	1.16E-03
12	GO:0031969: chloroplast membrane	1.71E-03
13	GO:0009570: chloroplast stroma	1.76E-03
14	GO:0042644: chloroplast nucleoid	2.02E-03
15	GO:0000418: DNA-directed RNA polymerase IV complex	2.51E-03
16	GO:0090404: pollen tube tip	2.77E-03
17	GO:0009535: chloroplast thylakoid membrane	2.77E-03
18	GO:0043231: intracellular membrane-bounded organelle	3.17E-03
19	GO:0009536: plastid	4.30E-03
20	GO:0009532: plastid stroma	5.12E-03
21	GO:0009534: chloroplast thylakoid	7.36E-03
22	GO:0005778: peroxisomal membrane	9.94E-03
23	GO:0030529: intracellular ribonucleoprotein complex	1.08E-02
24	GO:0009707: chloroplast outer membrane	1.30E-02
25	GO:0009543: chloroplast thylakoid lumen	3.43E-02
26	GO:0005759: mitochondrial matrix	4.04E-02
27	GO:0005615: extracellular space	4.67E-02