co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G14240

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0044154: histone H3-K14 acetylation	0.00E+00
2	GO:1901698: response to nitrogen compound	0.00E+00
3	GO:0046460: neutral lipid biosynthetic process	0.00E+00
4	GO:0031116: positive regulation of microtubule polymerization	0.00E+00
5	GO:0043972: histone H3-K23 acetylation	0.00E+00
6	GO:0033528: S-methylmethionine cycle	0.00E+00
7	GO:0051322: anaphase	5.37E-06
8	GO:0051171: regulation of nitrogen compound metabolic process	7.39E-05
9	GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process	7.39E-05
10	GO:0043971: histone H3-K18 acetylation	7.39E-05
11	GO:0048657: anther wall tapetum cell differentiation	7.39E-05
12	GO:0042547: cell wall modification involved in multidimensional cell growth	7.39E-05
13	GO:0043087: regulation of GTPase activity	7.39E-05
14	GO:0010207: photosystem II assembly	1.50E-04
15	GO:0010167: response to nitrate	1.70E-04
16	GO:0006435: threonyl-tRNA aminoacylation	1.77E-04
17	GO:0043255: regulation of carbohydrate biosynthetic process	1.77E-04
18	GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation	1.77E-04
19	GO:0071705: nitrogen compound transport	2.99E-04
20	GO:0001578: microtubule bundle formation	2.99E-04
21	GO:0006166: purine ribonucleoside salvage	4.32E-04
22	GO:0010306: rhamnogalacturonan II biosynthetic process	4.32E-04
23	GO:0010255: glucose mediated signaling pathway	4.32E-04
24	GO:0006168: adenine salvage	4.32E-04
25	GO:0071249: cellular response to nitrate	5.75E-04
26	GO:0006552: leucine catabolic process	5.75E-04
27	GO:0007020: microtubule nucleation	5.75E-04
28	GO:0000910: cytokinesis	7.15E-04
29	GO:0031365: N-terminal protein amino acid modification	7.29E-04
30	GO:0044209: AMP salvage	7.29E-04
31	GO:0046785: microtubule polymerization	7.29E-04
32	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	8.91E-04
33	GO:0010337: regulation of salicylic acid metabolic process	8.91E-04
34	GO:0034389: lipid particle organization	1.06E-03
35	GO:0048528: post-embryonic root development	1.24E-03
36	GO:0022904: respiratory electron transport chain	1.24E-03
37	GO:0007155: cell adhesion	1.43E-03
38	GO:0048564: photosystem I assembly	1.43E-03
39	GO:0009704: de-etiolation	1.43E-03
40	GO:0045010: actin nucleation	1.43E-03
41	GO:0022900: electron transport chain	1.63E-03
42	GO:0044030: regulation of DNA methylation	1.63E-03
43	GO:0019432: triglyceride biosynthetic process	1.83E-03
44	GO:0009821: alkaloid biosynthetic process	1.83E-03
45	GO:0009086: methionine biosynthetic process	2.05E-03
46	GO:0010380: regulation of chlorophyll biosynthetic process	2.05E-03
47	GO:0006032: chitin catabolic process	2.28E-03
48	GO:0015706: nitrate transport	2.75E-03
49	GO:0009767: photosynthetic electron transport chain	3.00E-03
50	GO:0010053: root epidermal cell differentiation	3.51E-03
51	GO:0009825: multidimensional cell growth	3.51E-03
52	GO:0080188: RNA-directed DNA methylation	3.51E-03
53	GO:0090351: seedling development	3.51E-03
54	GO:0006071: glycerol metabolic process	3.78E-03
55	GO:0010187: negative regulation of seed germination	4.06E-03
56	GO:0006289: nucleotide-excision repair	4.06E-03
57	GO:0010073: meristem maintenance	4.34E-03
58	GO:0006825: copper ion transport	4.34E-03
59	GO:0043622: cortical microtubule organization	4.34E-03
60	GO:0016998: cell wall macromolecule catabolic process	4.63E-03
61	GO:0031348: negative regulation of defense response	4.93E-03
62	GO:0080092: regulation of pollen tube growth	4.93E-03
63	GO:0006730: one-carbon metabolic process	4.93E-03
64	GO:0009814: defense response, incompatible interaction	4.93E-03
65	GO:0016226: iron-sulfur cluster assembly	4.93E-03
66	GO:0010584: pollen exine formation	5.54E-03
67	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	5.86E-03
68	GO:0048868: pollen tube development	6.51E-03
69	GO:0010268: brassinosteroid homeostasis	6.51E-03
70	GO:0010197: polar nucleus fusion	6.51E-03
71	GO:0009646: response to absence of light	6.84E-03
72	GO:0016132: brassinosteroid biosynthetic process	7.53E-03
73	GO:0071554: cell wall organization or biogenesis	7.53E-03
74	GO:0009658: chloroplast organization	7.82E-03
75	GO:0007264: small GTPase mediated signal transduction	7.89E-03
76	GO:0010583: response to cyclopentenone	7.89E-03
77	GO:0071281: cellular response to iron ion	8.25E-03
78	GO:0010090: trichome morphogenesis	8.25E-03
79	GO:0009860: pollen tube growth	8.42E-03
80	GO:0016125: sterol metabolic process	8.61E-03
81	GO:0016126: sterol biosynthetic process	9.74E-03
82	GO:0009911: positive regulation of flower development	9.74E-03
83	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.00E-02
84	GO:0046777: protein autophosphorylation	1.04E-02
85	GO:0030244: cellulose biosynthetic process	1.17E-02
86	GO:0009910: negative regulation of flower development	1.30E-02
87	GO:0006508: proteolysis	1.38E-02
88	GO:0009853: photorespiration	1.39E-02
89	GO:0045087: innate immune response	1.39E-02
90	GO:0008283: cell proliferation	1.66E-02
91	GO:0006468: protein phosphorylation	1.84E-02
92	GO:0009873: ethylene-activated signaling pathway	1.86E-02
93	GO:0006812: cation transport	1.95E-02
94	GO:0009809: lignin biosynthetic process	2.05E-02
95	GO:0010224: response to UV-B	2.10E-02
96	GO:0006417: regulation of translation	2.21E-02
97	GO:0006096: glycolytic process	2.31E-02
98	GO:0009740: gibberellic acid mediated signaling pathway	2.53E-02
99	GO:0009058: biosynthetic process	3.21E-02
100	GO:0040008: regulation of growth	3.77E-02
101	GO:0007623: circadian rhythm	3.89E-02
102	GO:0045490: pectin catabolic process	3.89E-02
103	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	4.22E-02
104	GO:0009739: response to gibberellin	4.22E-02
105	GO:0007166: cell surface receptor signaling pathway	4.28E-02
106	GO:0010468: regulation of gene expression	4.41E-02

Rank	GO Term	Adjusted P value
1	GO:0043783: oxidoreductase activity, oxidizing metal ions with flavin as acceptor	0.00E+00
2	GO:0004740: pyruvate dehydrogenase (acetyl-transferring) kinase activity	0.00E+00
3	GO:0004174: electron-transferring-flavoprotein dehydrogenase activity	0.00E+00
4	GO:0048039: ubiquinone binding	0.00E+00
5	GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity	7.39E-05
6	GO:0004008: copper-exporting ATPase activity	7.39E-05
7	GO:0004326: tetrahydrofolylpolyglutamate synthase activity	1.77E-04
8	GO:0008898: S-adenosylmethionine-homocysteine S-methyltransferase activity	1.77E-04
9	GO:0004829: threonine-tRNA ligase activity	1.77E-04
10	GO:0008430: selenium binding	2.99E-04
11	GO:0032947: protein complex scaffold	2.99E-04
12	GO:0032549: ribonucleoside binding	2.99E-04
13	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	2.99E-04
14	GO:0047334: diphosphate-fructose-6-phosphate 1-phosphotransferase activity	2.99E-04
15	GO:0016805: dipeptidase activity	2.99E-04
16	GO:0000254: C-4 methylsterol oxidase activity	4.32E-04
17	GO:0003999: adenine phosphoribosyltransferase activity	4.32E-04
18	GO:0010385: double-stranded methylated DNA binding	5.75E-04
19	GO:0070628: proteasome binding	5.75E-04
20	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	7.29E-04
21	GO:0031593: polyubiquitin binding	8.91E-04
22	GO:0009927: histidine phosphotransfer kinase activity	1.06E-03
23	GO:0004144: diacylglycerol O-acyltransferase activity	1.06E-03
24	GO:0008235: metalloexopeptidase activity	1.24E-03
25	GO:0015491: cation:cation antiporter activity	1.43E-03
26	GO:0005375: copper ion transmembrane transporter activity	1.63E-03
27	GO:0051537: 2 iron, 2 sulfur cluster binding	1.68E-03
28	GO:0016844: strictosidine synthase activity	2.05E-03
29	GO:0004568: chitinase activity	2.28E-03
30	GO:0005506: iron ion binding	2.46E-03
31	GO:0004177: aminopeptidase activity	2.51E-03
32	GO:0005089: Rho guanyl-nucleotide exchange factor activity	2.51E-03
33	GO:0001054: RNA polymerase I activity	2.51E-03
34	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	3.00E-03
35	GO:0051536: iron-sulfur cluster binding	4.06E-03
36	GO:0043130: ubiquitin binding	4.06E-03
37	GO:0004176: ATP-dependent peptidase activity	4.63E-03
38	GO:0030570: pectate lyase activity	5.23E-03
39	GO:0008017: microtubule binding	5.30E-03
40	GO:0004402: histone acetyltransferase activity	6.18E-03
41	GO:0008080: N-acetyltransferase activity	6.51E-03
42	GO:0001085: RNA polymerase II transcription factor binding	6.51E-03
43	GO:0048038: quinone binding	7.53E-03
44	GO:0003684: damaged DNA binding	8.61E-03
45	GO:0046872: metal ion binding	8.64E-03
46	GO:0008237: metallopeptidase activity	8.98E-03
47	GO:0016413: O-acetyltransferase activity	9.36E-03
48	GO:0030247: polysaccharide binding	1.09E-02
49	GO:0005096: GTPase activator activity	1.22E-02
50	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	1.30E-02
51	GO:0042393: histone binding	1.52E-02
52	GO:0051539: 4 iron, 4 sulfur cluster binding	1.52E-02
53	GO:0009055: electron carrier activity	1.54E-02
54	GO:0035091: phosphatidylinositol binding	1.76E-02
55	GO:0005198: structural molecule activity	1.80E-02
56	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	2.05E-02
57	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	3.16E-02
58	GO:0016829: lyase activity	3.27E-02
59	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	3.39E-02
60	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.70E-02
61	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	4.62E-02

Rank	GO Term	Adjusted P value
1	GO:0017133: mitochondrial electron transfer flavoprotein complex	0.00E+00
2	GO:0009574: preprophase band	2.15E-06
3	GO:0010318: pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex	7.39E-05
4	GO:0072686: mitotic spindle	7.29E-04
5	GO:0031209: SCAR complex	8.91E-04
6	GO:0010005: cortical microtubule, transverse to long axis	1.06E-03
7	GO:0031305: integral component of mitochondrial inner membrane	1.43E-03
8	GO:0005811: lipid particle	1.63E-03
9	GO:0005856: cytoskeleton	1.74E-03
10	GO:0005736: DNA-directed RNA polymerase I complex	1.83E-03
11	GO:0055028: cortical microtubule	2.28E-03
12	GO:0005740: mitochondrial envelope	2.28E-03
13	GO:0016324: apical plasma membrane	2.28E-03
14	GO:0009507: chloroplast	2.49E-03
15	GO:0005938: cell cortex	3.00E-03
16	GO:0009524: phragmoplast	3.88E-03
17	GO:0009535: chloroplast thylakoid membrane	8.57E-03
18	GO:0005874: microtubule	9.37E-03
19	GO:0005667: transcription factor complex	1.05E-02
20	GO:0009707: chloroplast outer membrane	1.17E-02
21	GO:0005819: spindle	1.48E-02
22	GO:0009536: plastid	1.53E-02
23	GO:0016021: integral component of membrane	2.02E-02
24	GO:0005789: endoplasmic reticulum membrane	2.02E-02
25	GO:0005773: vacuole	3.11E-02
26	GO:0005759: mitochondrial matrix	3.64E-02
27	GO:0046658: anchored component of plasma membrane	4.75E-02