Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G13910

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010324: membrane invagination0.00E+00
2GO:0010055: atrichoblast differentiation0.00E+00
3GO:0090480: purine nucleotide-sugar transmembrane transport0.00E+00
4GO:1902001: fatty acid transmembrane transport0.00E+00
5GO:1902289: negative regulation of defense response to oomycetes0.00E+00
6GO:0098755: maintenance of seed dormancy by absisic acid0.00E+00
7GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance0.00E+00
8GO:0009312: oligosaccharide biosynthetic process0.00E+00
9GO:0090359: negative regulation of abscisic acid biosynthetic process0.00E+00
10GO:0015690: aluminum cation transport0.00E+00
11GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
12GO:2000378: negative regulation of reactive oxygen species metabolic process0.00E+00
13GO:0032515: negative regulation of phosphoprotein phosphatase activity0.00E+00
14GO:1902009: positive regulation of toxin transport0.00E+00
15GO:0046865: terpenoid transport0.00E+00
16GO:0018063: cytochrome c-heme linkage0.00E+00
17GO:0051553: flavone biosynthetic process0.00E+00
18GO:0010112: regulation of systemic acquired resistance1.63E-06
19GO:0071456: cellular response to hypoxia1.93E-06
20GO:0009751: response to salicylic acid4.62E-06
21GO:0051707: response to other organism1.42E-05
22GO:0042742: defense response to bacterium3.94E-05
23GO:0010150: leaf senescence4.83E-05
24GO:0009617: response to bacterium7.98E-05
25GO:0009636: response to toxic substance1.79E-04
26GO:0002237: response to molecule of bacterial origin2.35E-04
27GO:0009643: photosynthetic acclimation3.38E-04
28GO:0009759: indole glucosinolate biosynthetic process3.38E-04
29GO:1990542: mitochondrial transmembrane transport5.40E-04
30GO:0032107: regulation of response to nutrient levels5.40E-04
31GO:1902600: hydrogen ion transmembrane transport5.40E-04
32GO:0048508: embryonic meristem development5.40E-04
33GO:0015760: glucose-6-phosphate transport5.40E-04
34GO:0046256: 2,4,6-trinitrotoluene catabolic process5.40E-04
35GO:0043547: positive regulation of GTPase activity5.40E-04
36GO:1990641: response to iron ion starvation5.40E-04
37GO:0033306: phytol metabolic process5.40E-04
38GO:0009700: indole phytoalexin biosynthetic process5.40E-04
39GO:0050691: regulation of defense response to virus by host5.40E-04
40GO:0010230: alternative respiration5.40E-04
41GO:0032491: detection of molecule of fungal origin5.40E-04
42GO:0009968: negative regulation of signal transduction5.40E-04
43GO:0009737: response to abscisic acid6.47E-04
44GO:0050832: defense response to fungus7.58E-04
45GO:0010120: camalexin biosynthetic process8.74E-04
46GO:0010204: defense response signaling pathway, resistance gene-independent8.74E-04
47GO:0080183: response to photooxidative stress1.16E-03
48GO:0080151: positive regulation of salicylic acid mediated signaling pathway1.16E-03
49GO:0009838: abscission1.16E-03
50GO:0080181: lateral root branching1.16E-03
51GO:0006024: glycosaminoglycan biosynthetic process1.16E-03
52GO:0055088: lipid homeostasis1.16E-03
53GO:0010115: regulation of abscisic acid biosynthetic process1.16E-03
54GO:0000719: photoreactive repair1.16E-03
55GO:0006101: citrate metabolic process1.16E-03
56GO:0015908: fatty acid transport1.16E-03
57GO:0002240: response to molecule of oomycetes origin1.16E-03
58GO:0010271: regulation of chlorophyll catabolic process1.16E-03
59GO:0044419: interspecies interaction between organisms1.16E-03
60GO:0019725: cellular homeostasis1.16E-03
61GO:0009945: radial axis specification1.16E-03
62GO:0015712: hexose phosphate transport1.16E-03
63GO:0015012: heparan sulfate proteoglycan biosynthetic process1.16E-03
64GO:0051258: protein polymerization1.16E-03
65GO:0071668: plant-type cell wall assembly1.16E-03
66GO:0010193: response to ozone1.17E-03
67GO:0010200: response to chitin1.18E-03
68GO:0006952: defense response1.20E-03
69GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.23E-03
70GO:0006979: response to oxidative stress1.47E-03
71GO:0007166: cell surface receptor signaling pathway1.66E-03
72GO:0009684: indoleacetic acid biosynthetic process1.66E-03
73GO:0051607: defense response to virus1.75E-03
74GO:0010186: positive regulation of cellular defense response1.91E-03
75GO:0015783: GDP-fucose transport1.91E-03
76GO:0000266: mitochondrial fission1.91E-03
77GO:0015692: lead ion transport1.91E-03
78GO:0015714: phosphoenolpyruvate transport1.91E-03
79GO:0080168: abscisic acid transport1.91E-03
80GO:0015695: organic cation transport1.91E-03
81GO:1900055: regulation of leaf senescence1.91E-03
82GO:0006048: UDP-N-acetylglucosamine biosynthetic process1.91E-03
83GO:0006954: inflammatory response1.91E-03
84GO:0034051: negative regulation of plant-type hypersensitive response1.91E-03
85GO:0043328: protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway1.91E-03
86GO:0035436: triose phosphate transmembrane transport1.91E-03
87GO:0080163: regulation of protein serine/threonine phosphatase activity1.91E-03
88GO:0009225: nucleotide-sugar metabolic process2.74E-03
89GO:0010116: positive regulation of abscisic acid biosynthetic process2.76E-03
90GO:0009753: response to jasmonic acid2.76E-03
91GO:0006020: inositol metabolic process2.76E-03
92GO:0070301: cellular response to hydrogen peroxide2.76E-03
93GO:0002239: response to oomycetes2.76E-03
94GO:0010731: protein glutathionylation2.76E-03
95GO:0015696: ammonium transport2.76E-03
96GO:0071323: cellular response to chitin2.76E-03
97GO:0051289: protein homotetramerization2.76E-03
98GO:0080024: indolebutyric acid metabolic process2.76E-03
99GO:0055070: copper ion homeostasis2.76E-03
100GO:0001676: long-chain fatty acid metabolic process2.76E-03
101GO:0009407: toxin catabolic process3.00E-03
102GO:0000162: tryptophan biosynthetic process3.06E-03
103GO:0080147: root hair cell development3.40E-03
104GO:2000377: regulation of reactive oxygen species metabolic process3.40E-03
105GO:1901141: regulation of lignin biosynthetic process3.72E-03
106GO:0010109: regulation of photosynthesis3.72E-03
107GO:0060548: negative regulation of cell death3.72E-03
108GO:0045227: capsule polysaccharide biosynthetic process3.72E-03
109GO:0048830: adventitious root development3.72E-03
110GO:1901002: positive regulation of response to salt stress3.72E-03
111GO:0072488: ammonium transmembrane transport3.72E-03
112GO:0033358: UDP-L-arabinose biosynthetic process3.72E-03
113GO:0015713: phosphoglycerate transport3.72E-03
114GO:0015867: ATP transport3.72E-03
115GO:0006097: glyoxylate cycle4.78E-03
116GO:0009229: thiamine diphosphate biosynthetic process4.78E-03
117GO:0034052: positive regulation of plant-type hypersensitive response4.78E-03
118GO:0009625: response to insect4.93E-03
119GO:0006012: galactose metabolic process4.93E-03
120GO:0015866: ADP transport5.92E-03
121GO:0010256: endomembrane system organization5.92E-03
122GO:1900425: negative regulation of defense response to bacterium5.92E-03
123GO:0033365: protein localization to organelle5.92E-03
124GO:0010337: regulation of salicylic acid metabolic process5.92E-03
125GO:0006574: valine catabolic process5.92E-03
126GO:0009228: thiamine biosynthetic process5.92E-03
127GO:0002238: response to molecule of fungal origin5.92E-03
128GO:0006855: drug transmembrane transport6.04E-03
129GO:0042391: regulation of membrane potential6.30E-03
130GO:0031347: regulation of defense response6.33E-03
131GO:0042372: phylloquinone biosynthetic process7.16E-03
132GO:0045926: negative regulation of growth7.16E-03
133GO:0009942: longitudinal axis specification7.16E-03
134GO:0009749: response to glucose7.85E-03
135GO:0002229: defense response to oomycetes8.41E-03
136GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway8.47E-03
137GO:0043090: amino acid import8.47E-03
138GO:0071446: cellular response to salicylic acid stimulus8.47E-03
139GO:1900056: negative regulation of leaf senescence8.47E-03
140GO:1900057: positive regulation of leaf senescence8.47E-03
141GO:0000122: negative regulation of transcription from RNA polymerase II promoter8.47E-03
142GO:0050829: defense response to Gram-negative bacterium8.47E-03
143GO:1902074: response to salt8.47E-03
144GO:0031540: regulation of anthocyanin biosynthetic process9.87E-03
145GO:0006102: isocitrate metabolic process9.87E-03
146GO:0016559: peroxisome fission9.87E-03
147GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline9.87E-03
148GO:0009819: drought recovery9.87E-03
149GO:0009850: auxin metabolic process9.87E-03
150GO:0043068: positive regulation of programmed cell death9.87E-03
151GO:0009620: response to fungus1.02E-02
152GO:0017004: cytochrome complex assembly1.13E-02
153GO:2000031: regulation of salicylic acid mediated signaling pathway1.13E-02
154GO:0010208: pollen wall assembly1.13E-02
155GO:0006997: nucleus organization1.13E-02
156GO:0015780: nucleotide-sugar transport1.29E-02
157GO:0007338: single fertilization1.29E-02
158GO:0006098: pentose-phosphate shunt1.29E-02
159GO:0019432: triglyceride biosynthetic process1.29E-02
160GO:0010029: regulation of seed germination1.29E-02
161GO:0009627: systemic acquired resistance1.37E-02
162GO:1900426: positive regulation of defense response to bacterium1.45E-02
163GO:0090332: stomatal closure1.45E-02
164GO:0048268: clathrin coat assembly1.45E-02
165GO:0010380: regulation of chlorophyll biosynthetic process1.45E-02
166GO:0008202: steroid metabolic process1.45E-02
167GO:0080167: response to karrikin1.51E-02
168GO:0006468: protein phosphorylation1.61E-02
169GO:0009641: shade avoidance1.62E-02
170GO:0051555: flavonol biosynthetic process1.62E-02
171GO:0009870: defense response signaling pathway, resistance gene-dependent1.62E-02
172GO:0006032: chitin catabolic process1.62E-02
173GO:0019684: photosynthesis, light reaction1.80E-02
174GO:0009089: lysine biosynthetic process via diaminopimelate1.80E-02
175GO:0009682: induced systemic resistance1.80E-02
176GO:0052544: defense response by callose deposition in cell wall1.80E-02
177GO:0015031: protein transport1.83E-02
178GO:0012501: programmed cell death1.98E-02
179GO:0045037: protein import into chloroplast stroma1.98E-02
180GO:0040008: regulation of growth2.16E-02
181GO:0018107: peptidyl-threonine phosphorylation2.17E-02
182GO:0006829: zinc II ion transport2.17E-02
183GO:2000012: regulation of auxin polar transport2.17E-02
184GO:0009611: response to wounding2.30E-02
185GO:0006839: mitochondrial transport2.32E-02
186GO:0006887: exocytosis2.42E-02
187GO:0006897: endocytosis2.42E-02
188GO:0006631: fatty acid metabolic process2.42E-02
189GO:0046688: response to copper ion2.56E-02
190GO:0090351: seedling development2.56E-02
191GO:0030150: protein import into mitochondrial matrix2.98E-02
192GO:0008152: metabolic process3.12E-02
193GO:0006825: copper ion transport3.20E-02
194GO:0051302: regulation of cell division3.20E-02
195GO:0006812: cation transport3.29E-02
196GO:0009269: response to desiccation3.42E-02
197GO:0016998: cell wall macromolecule catabolic process3.42E-02
198GO:0006486: protein glycosylation3.53E-02
199GO:0006813: potassium ion transport3.53E-02
200GO:0031348: negative regulation of defense response3.65E-02
201GO:0010017: red or far-red light signaling pathway3.65E-02
202GO:0007005: mitochondrion organization3.65E-02
203GO:0009411: response to UV3.88E-02
204GO:0042127: regulation of cell proliferation4.12E-02
205GO:0070417: cellular response to cold4.36E-02
206GO:0009626: plant-type hypersensitive response4.44E-02
207GO:0000271: polysaccharide biosynthetic process4.61E-02
208GO:0000413: protein peptidyl-prolyl isomerization4.61E-02
209GO:0009723: response to ethylene4.71E-02
210GO:0010182: sugar mediated signaling pathway4.86E-02
211GO:0048868: pollen tube development4.86E-02
212GO:0006885: regulation of pH4.86E-02
213GO:0006520: cellular amino acid metabolic process4.86E-02
214GO:0045489: pectin biosynthetic process4.86E-02
RankGO TermAdjusted P value
1GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor0.00E+00
2GO:0033759: flavone synthase activity0.00E+00
3GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity0.00E+00
4GO:0004610: phosphoacetylglucosamine mutase activity0.00E+00
5GO:0050334: thiaminase activity0.00E+00
6GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
7GO:0004865: protein serine/threonine phosphatase inhibitor activity0.00E+00
8GO:0005212: structural constituent of eye lens0.00E+00
9GO:0102391: decanoate--CoA ligase activity4.50E-04
10GO:0003978: UDP-glucose 4-epimerase activity4.50E-04
11GO:2001227: quercitrin binding5.40E-04
12GO:0019707: protein-cysteine S-acyltransferase activity5.40E-04
13GO:0047940: glucuronokinase activity5.40E-04
14GO:2001147: camalexin binding5.40E-04
15GO:0015245: fatty acid transporter activity5.40E-04
16GO:0010285: L,L-diaminopimelate aminotransferase activity5.40E-04
17GO:0004467: long-chain fatty acid-CoA ligase activity5.77E-04
18GO:0043295: glutathione binding5.77E-04
19GO:0047893: flavonol 3-O-glucosyltransferase activity7.18E-04
20GO:0047364: desulfoglucosinolate sulfotransferase activity1.16E-03
21GO:0003994: aconitate hydratase activity1.16E-03
22GO:0015152: glucose-6-phosphate transmembrane transporter activity1.16E-03
23GO:0050403: trans-zeatin O-beta-D-glucosyltransferase activity1.16E-03
24GO:0050502: cis-zeatin O-beta-D-glucosyltransferase activity1.16E-03
25GO:0032934: sterol binding1.16E-03
26GO:0015036: disulfide oxidoreductase activity1.16E-03
27GO:0050736: O-malonyltransferase activity1.16E-03
28GO:0048531: beta-1,3-galactosyltransferase activity1.16E-03
29GO:0015297: antiporter activity1.21E-03
30GO:0071917: triose-phosphate transmembrane transporter activity1.91E-03
31GO:0005457: GDP-fucose transmembrane transporter activity1.91E-03
32GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity1.91E-03
33GO:0004324: ferredoxin-NADP+ reductase activity1.91E-03
34GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity1.91E-03
35GO:0016531: copper chaperone activity1.91E-03
36GO:0032403: protein complex binding1.91E-03
37GO:0043565: sequence-specific DNA binding2.02E-03
38GO:0008375: acetylglucosaminyltransferase activity2.17E-03
39GO:0030247: polysaccharide binding2.32E-03
40GO:0030552: cAMP binding2.74E-03
41GO:0030553: cGMP binding2.74E-03
42GO:0017077: oxidative phosphorylation uncoupler activity2.76E-03
43GO:0035529: NADH pyrophosphatase activity2.76E-03
44GO:0022890: inorganic cation transmembrane transporter activity2.76E-03
45GO:0010178: IAA-amino acid conjugate hydrolase activity2.76E-03
46GO:0016758: transferase activity, transferring hexosyl groups3.29E-03
47GO:0005509: calcium ion binding3.35E-03
48GO:0001046: core promoter sequence-specific DNA binding3.40E-03
49GO:0050373: UDP-arabinose 4-epimerase activity3.72E-03
50GO:0004834: tryptophan synthase activity3.72E-03
51GO:0004737: pyruvate decarboxylase activity3.72E-03
52GO:0050378: UDP-glucuronate 4-epimerase activity3.72E-03
53GO:0004930: G-protein coupled receptor activity3.72E-03
54GO:0015120: phosphoglycerate transmembrane transporter activity3.72E-03
55GO:0005216: ion channel activity3.75E-03
56GO:0035251: UDP-glucosyltransferase activity4.13E-03
57GO:0004364: glutathione transferase activity4.71E-03
58GO:0016301: kinase activity4.77E-03
59GO:0070696: transmembrane receptor protein serine/threonine kinase binding4.78E-03
60GO:0016773: phosphotransferase activity, alcohol group as acceptor4.78E-03
61GO:0005496: steroid binding4.78E-03
62GO:0047631: ADP-ribose diphosphatase activity4.78E-03
63GO:0004675: transmembrane receptor protein serine/threonine kinase activity5.04E-03
64GO:0004499: N,N-dimethylaniline monooxygenase activity5.37E-03
65GO:0008519: ammonium transmembrane transporter activity5.92E-03
66GO:0030976: thiamine pyrophosphate binding5.92E-03
67GO:0000210: NAD+ diphosphatase activity5.92E-03
68GO:0005249: voltage-gated potassium channel activity6.30E-03
69GO:0030551: cyclic nucleotide binding6.30E-03
70GO:0016757: transferase activity, transferring glycosyl groups6.40E-03
71GO:0008194: UDP-glycosyltransferase activity6.65E-03
72GO:0015217: ADP transmembrane transporter activity7.16E-03
73GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity7.16E-03
74GO:0004144: diacylglycerol O-acyltransferase activity7.16E-03
75GO:0005347: ATP transmembrane transporter activity7.16E-03
76GO:0004656: procollagen-proline 4-dioxygenase activity7.16E-03
77GO:0015299: solute:proton antiporter activity7.31E-03
78GO:0050662: coenzyme binding7.31E-03
79GO:0016831: carboxy-lyase activity8.47E-03
80GO:0102425: myricetin 3-O-glucosyltransferase activity8.47E-03
81GO:0102360: daphnetin 3-O-glucosyltransferase activity8.47E-03
82GO:0004714: transmembrane receptor protein tyrosine kinase activity9.87E-03
83GO:0005544: calcium-dependent phospholipid binding9.87E-03
84GO:0004033: aldo-keto reductase (NADP) activity9.87E-03
85GO:0080043: quercetin 3-O-glucosyltransferase activity1.02E-02
86GO:0080044: quercetin 7-O-glucosyltransferase activity1.02E-02
87GO:0008483: transaminase activity1.09E-02
88GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity1.09E-02
89GO:0008142: oxysterol binding1.13E-02
90GO:0047617: acyl-CoA hydrolase activity1.45E-02
91GO:0004568: chitinase activity1.62E-02
92GO:0005545: 1-phosphatidylinositol binding1.62E-02
93GO:0015020: glucuronosyltransferase activity1.62E-02
94GO:0004864: protein phosphatase inhibitor activity1.62E-02
95GO:0015238: drug transmembrane transporter activity1.68E-02
96GO:0008559: xenobiotic-transporting ATPase activity1.80E-02
97GO:0004674: protein serine/threonine kinase activity1.80E-02
98GO:0015386: potassium:proton antiporter activity1.80E-02
99GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors2.03E-02
100GO:0004022: alcohol dehydrogenase (NAD) activity2.17E-02
101GO:0005315: inorganic phosphate transmembrane transporter activity2.17E-02
102GO:0050661: NADP binding2.32E-02
103GO:0008266: poly(U) RNA binding2.36E-02
104GO:0008061: chitin binding2.56E-02
105GO:0003712: transcription cofactor activity2.56E-02
106GO:0008146: sulfotransferase activity2.56E-02
107GO:0031418: L-ascorbic acid binding2.98E-02
108GO:0051287: NAD binding3.17E-02
109GO:0015079: potassium ion transmembrane transporter activity3.20E-02
110GO:0008324: cation transmembrane transporter activity3.20E-02
111GO:0019706: protein-cysteine S-palmitoyltransferase activity3.42E-02
112GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity3.65E-02
113GO:0008810: cellulase activity3.88E-02
114GO:0005507: copper ion binding3.99E-02
115GO:0005516: calmodulin binding4.37E-02
116GO:0005451: monovalent cation:proton antiporter activity4.61E-02
117GO:0005199: structural constituent of cell wall4.86E-02
118GO:0046873: metal ion transmembrane transporter activity4.86E-02
119GO:0030276: clathrin binding4.86E-02
RankGO TermAdjusted P value
1GO:0016021: integral component of membrane1.48E-13
2GO:0005794: Golgi apparatus1.28E-07
3GO:0005886: plasma membrane1.54E-05
4GO:0000813: ESCRT I complex2.40E-04
5GO:0000164: protein phosphatase type 1 complex2.40E-04
6GO:0005802: trans-Golgi network2.49E-04
7GO:0000138: Golgi trans cisterna5.40E-04
8GO:0005743: mitochondrial inner membrane5.76E-04
9GO:0005768: endosome1.10E-03
10GO:0005901: caveola1.16E-03
11GO:0031314: extrinsic component of mitochondrial inner membrane1.16E-03
12GO:0009530: primary cell wall1.91E-03
13GO:0070062: extracellular exosome2.76E-03
14GO:0030658: transport vesicle membrane2.76E-03
15GO:0005777: peroxisome3.24E-03
16GO:0005741: mitochondrial outer membrane4.13E-03
17GO:0031965: nuclear membrane7.85E-03
18GO:0046658: anchored component of plasma membrane8.60E-03
19GO:0032580: Golgi cisterna membrane1.02E-02
20GO:0005789: endoplasmic reticulum membrane1.10E-02
21GO:0005779: integral component of peroxisomal membrane1.13E-02
22GO:0009506: plasmodesma1.30E-02
23GO:0017119: Golgi transport complex1.62E-02
24GO:0005783: endoplasmic reticulum2.35E-02
25GO:0005795: Golgi stack2.56E-02
26GO:0005769: early endosome2.77E-02
27GO:0005758: mitochondrial intermembrane space2.98E-02
28GO:0043231: intracellular membrane-bounded organelle3.12E-02
29GO:0005774: vacuolar membrane3.22E-02
30GO:0005905: clathrin-coated pit3.42E-02
31GO:0005744: mitochondrial inner membrane presequence translocase complex4.12E-02
32GO:0005887: integral component of plasma membrane4.22E-02
33GO:0030136: clathrin-coated vesicle4.36E-02
34GO:0005770: late endosome4.86E-02
35GO:0000139: Golgi membrane4.98E-02
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Gene type



Gene DE type