Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G13520

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006793: phosphorus metabolic process0.00E+00
2GO:1901430: positive regulation of syringal lignin biosynthetic process4.48E-07
3GO:0045905: positive regulation of translational termination1.30E-06
4GO:0051592: response to calcium ion1.30E-06
5GO:0045901: positive regulation of translational elongation1.30E-06
6GO:0006452: translational frameshifting1.30E-06
7GO:0010351: lithium ion transport2.51E-06
8GO:0006556: S-adenosylmethionine biosynthetic process2.51E-06
9GO:0006882: cellular zinc ion homeostasis4.07E-06
10GO:0030026: cellular manganese ion homeostasis1.62E-05
11GO:0055062: phosphate ion homeostasis3.41E-05
12GO:0006874: cellular calcium ion homeostasis7.16E-05
13GO:0006730: one-carbon metabolic process8.23E-05
14GO:0010089: xylem development9.36E-05
15GO:0006814: sodium ion transport1.17E-04
16GO:0071281: cellular response to iron ion1.42E-04
17GO:0006812: cation transport3.33E-04
18GO:0009809: lignin biosynthetic process3.49E-04
19GO:0009624: response to nematode4.41E-04
20GO:0042744: hydrogen peroxide catabolic process5.54E-04
21GO:0006413: translational initiation6.01E-04
22GO:0080167: response to karrikin9.55E-04
23GO:0045892: negative regulation of transcription, DNA-templated1.08E-03
24GO:0009735: response to cytokinin1.68E-03
25GO:0006979: response to oxidative stress2.89E-03
26GO:0055114: oxidation-reduction process3.17E-02
27GO:0006351: transcription, DNA-templated4.89E-02
RankGO TermAdjusted P value
1GO:0004478: methionine adenosyltransferase activity2.51E-06
2GO:0015368: calcium:cation antiporter activity5.95E-06
3GO:0015369: calcium:proton antiporter activity5.95E-06
4GO:0043022: ribosome binding1.94E-05
5GO:0015491: cation:cation antiporter activity1.94E-05
6GO:0003746: translation elongation factor activity2.40E-04
7GO:0003743: translation initiation factor activity6.95E-04
8GO:0004601: peroxidase activity8.33E-04
9GO:0005515: protein binding1.06E-03
10GO:0005507: copper ion binding2.27E-03
11GO:0020037: heme binding3.91E-03
12GO:0046872: metal ion binding3.60E-02
13GO:0003700: transcription factor activity, sequence-specific DNA binding4.80E-02
RankGO TermAdjusted P value
1GO:0070062: extracellular exosome4.07E-06
2GO:0005618: cell wall4.08E-04
3GO:0009705: plant-type vacuole membrane6.29E-04
4GO:0005730: nucleolus4.11E-03
5GO:0005829: cytosol5.63E-03
6GO:0005774: vacuolar membrane6.73E-03
7GO:0048046: apoplast6.96E-03
8GO:0005773: vacuole9.07E-03
9GO:0009506: plasmodesma1.74E-02
10GO:0005794: Golgi apparatus2.16E-02
11GO:0005737: cytoplasm3.58E-02
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Gene type



Gene DE type





AT5G05340