Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G13380

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010055: atrichoblast differentiation0.00E+00
2GO:1902001: fatty acid transmembrane transport0.00E+00
3GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance0.00E+00
4GO:0090359: negative regulation of abscisic acid biosynthetic process0.00E+00
5GO:0015690: aluminum cation transport0.00E+00
6GO:1900367: positive regulation of defense response to insect0.00E+00
7GO:0009312: oligosaccharide biosynthetic process0.00E+00
8GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
9GO:0046865: terpenoid transport0.00E+00
10GO:0010324: membrane invagination0.00E+00
11GO:0071327: cellular response to trehalose stimulus0.00E+00
12GO:0006952: defense response4.70E-07
13GO:0010112: regulation of systemic acquired resistance1.08E-06
14GO:0071456: cellular response to hypoxia1.19E-06
15GO:0060548: negative regulation of cell death1.49E-06
16GO:0009751: response to salicylic acid2.05E-06
17GO:0051707: response to other organism8.42E-06
18GO:0019725: cellular homeostasis1.01E-05
19GO:0080151: positive regulation of salicylic acid mediated signaling pathway1.01E-05
20GO:0006979: response to oxidative stress1.79E-05
21GO:0010150: leaf senescence2.80E-05
22GO:0010186: positive regulation of cellular defense response3.43E-05
23GO:0009625: response to insect3.71E-05
24GO:0009617: response to bacterium4.74E-05
25GO:0042391: regulation of membrane potential6.00E-05
26GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway6.35E-05
27GO:0042742: defense response to bacterium7.81E-05
28GO:0045227: capsule polysaccharide biosynthetic process1.29E-04
29GO:0033358: UDP-L-arabinose biosynthetic process1.29E-04
30GO:0010200: response to chitin1.89E-04
31GO:0009643: photosynthetic acclimation2.80E-04
32GO:0006012: galactose metabolic process4.76E-04
33GO:0015760: glucose-6-phosphate transport4.78E-04
34GO:0019567: arabinose biosynthetic process4.78E-04
35GO:0080173: male-female gamete recognition during double fertilization4.78E-04
36GO:0033306: phytol metabolic process4.78E-04
37GO:1901183: positive regulation of camalexin biosynthetic process4.78E-04
38GO:0009270: response to humidity4.78E-04
39GO:0009700: indole phytoalexin biosynthetic process4.78E-04
40GO:0050691: regulation of defense response to virus by host4.78E-04
41GO:0032491: detection of molecule of fungal origin4.78E-04
42GO:0034214: protein hexamerization4.78E-04
43GO:1990542: mitochondrial transmembrane transport4.78E-04
44GO:0032107: regulation of response to nutrient levels4.78E-04
45GO:0048508: embryonic meristem development4.78E-04
46GO:0009611: response to wounding5.02E-04
47GO:0010120: camalexin biosynthetic process7.33E-04
48GO:0010204: defense response signaling pathway, resistance gene-independent7.33E-04
49GO:2000031: regulation of salicylic acid mediated signaling pathway7.33E-04
50GO:0009646: response to absence of light7.86E-04
51GO:0006098: pentose-phosphate shunt8.76E-04
52GO:0031347: regulation of defense response9.08E-04
53GO:0006468: protein phosphorylation9.25E-04
54GO:0010193: response to ozone9.34E-04
55GO:0009737: response to abscisic acid9.47E-04
56GO:0050832: defense response to fungus1.02E-03
57GO:0010618: aerenchyma formation1.03E-03
58GO:0080181: lateral root branching1.03E-03
59GO:0006024: glycosaminoglycan biosynthetic process1.03E-03
60GO:0055088: lipid homeostasis1.03E-03
61GO:0019521: D-gluconate metabolic process1.03E-03
62GO:0010115: regulation of abscisic acid biosynthetic process1.03E-03
63GO:0015908: fatty acid transport1.03E-03
64GO:0002240: response to molecule of oomycetes origin1.03E-03
65GO:0044419: interspecies interaction between organisms1.03E-03
66GO:0010271: regulation of chlorophyll catabolic process1.03E-03
67GO:0009945: radial axis specification1.03E-03
68GO:0015712: hexose phosphate transport1.03E-03
69GO:0051258: protein polymerization1.03E-03
70GO:0015012: heparan sulfate proteoglycan biosynthetic process1.03E-03
71GO:0071668: plant-type cell wall assembly1.03E-03
72GO:0015914: phospholipid transport1.03E-03
73GO:0010155: regulation of proton transport1.03E-03
74GO:0009838: abscission1.03E-03
75GO:0007166: cell surface receptor signaling pathway1.20E-03
76GO:0009626: plant-type hypersensitive response1.51E-03
77GO:0015692: lead ion transport1.68E-03
78GO:0015695: organic cation transport1.68E-03
79GO:0015714: phosphoenolpyruvate transport1.68E-03
80GO:0080168: abscisic acid transport1.68E-03
81GO:1900055: regulation of leaf senescence1.68E-03
82GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process1.68E-03
83GO:0006954: inflammatory response1.68E-03
84GO:0010498: proteasomal protein catabolic process1.68E-03
85GO:0034051: negative regulation of plant-type hypersensitive response1.68E-03
86GO:0043328: protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway1.68E-03
87GO:0080163: regulation of protein serine/threonine phosphatase activity1.68E-03
88GO:0035436: triose phosphate transmembrane transport1.68E-03
89GO:0045793: positive regulation of cell size1.68E-03
90GO:0009753: response to jasmonic acid1.90E-03
91GO:0002237: response to molecule of bacterial origin2.04E-03
92GO:0009266: response to temperature stimulus2.04E-03
93GO:0009225: nucleotide-sugar metabolic process2.28E-03
94GO:0010731: protein glutathionylation2.44E-03
95GO:0015696: ammonium transport2.44E-03
96GO:0051289: protein homotetramerization2.44E-03
97GO:0010116: positive regulation of abscisic acid biosynthetic process2.44E-03
98GO:0048194: Golgi vesicle budding2.44E-03
99GO:0080147: root hair cell development2.82E-03
100GO:2000377: regulation of reactive oxygen species metabolic process2.82E-03
101GO:0009867: jasmonic acid mediated signaling pathway2.83E-03
102GO:0048638: regulation of developmental growth3.28E-03
103GO:0009652: thigmotropism3.28E-03
104GO:0072488: ammonium transmembrane transport3.28E-03
105GO:0015713: phosphoglycerate transport3.28E-03
106GO:0080142: regulation of salicylic acid biosynthetic process3.28E-03
107GO:1901141: regulation of lignin biosynthetic process3.28E-03
108GO:0010109: regulation of photosynthesis3.28E-03
109GO:2000022: regulation of jasmonic acid mediated signaling pathway3.76E-03
110GO:0031348: negative regulation of defense response3.76E-03
111GO:0010225: response to UV-C4.21E-03
112GO:0034052: positive regulation of plant-type hypersensitive response4.21E-03
113GO:0009164: nucleoside catabolic process4.21E-03
114GO:0009229: thiamine diphosphate biosynthetic process4.21E-03
115GO:0009636: response to toxic substance4.54E-03
116GO:0006470: protein dephosphorylation5.19E-03
117GO:0010256: endomembrane system organization5.21E-03
118GO:0033365: protein localization to organelle5.21E-03
119GO:0009117: nucleotide metabolic process5.21E-03
120GO:0006574: valine catabolic process5.21E-03
121GO:0009228: thiamine biosynthetic process5.21E-03
122GO:0002238: response to molecule of fungal origin5.21E-03
123GO:0009759: indole glucosinolate biosynthetic process5.21E-03
124GO:0010942: positive regulation of cell death5.21E-03
125GO:0010310: regulation of hydrogen peroxide metabolic process6.28E-03
126GO:0042372: phylloquinone biosynthetic process6.28E-03
127GO:0045926: negative regulation of growth6.28E-03
128GO:0009612: response to mechanical stimulus6.28E-03
129GO:0009942: longitudinal axis specification6.28E-03
130GO:0043090: amino acid import7.43E-03
131GO:0071446: cellular response to salicylic acid stimulus7.43E-03
132GO:1900056: negative regulation of leaf senescence7.43E-03
133GO:1900057: positive regulation of leaf senescence7.43E-03
134GO:0000122: negative regulation of transcription from RNA polymerase II promoter7.43E-03
135GO:0050829: defense response to Gram-negative bacterium7.43E-03
136GO:1902074: response to salt7.43E-03
137GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway7.43E-03
138GO:0030091: protein repair8.65E-03
139GO:0009787: regulation of abscisic acid-activated signaling pathway8.65E-03
140GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline8.65E-03
141GO:0009819: drought recovery8.65E-03
142GO:0009850: auxin metabolic process8.65E-03
143GO:0043068: positive regulation of programmed cell death8.65E-03
144GO:0006997: nucleus organization9.94E-03
145GO:0010208: pollen wall assembly9.94E-03
146GO:0009723: response to ethylene1.03E-02
147GO:0009816: defense response to bacterium, incompatible interaction1.07E-02
148GO:0009627: systemic acquired resistance1.13E-02
149GO:0007338: single fertilization1.13E-02
150GO:0046916: cellular transition metal ion homeostasis1.13E-02
151GO:0019432: triglyceride biosynthetic process1.13E-02
152GO:0009835: fruit ripening1.13E-02
153GO:0006950: response to stress1.19E-02
154GO:0009638: phototropism1.27E-02
155GO:0090332: stomatal closure1.27E-02
156GO:0048268: clathrin coat assembly1.27E-02
157GO:0010380: regulation of chlorophyll biosynthetic process1.27E-02
158GO:0008202: steroid metabolic process1.27E-02
159GO:1900426: positive regulation of defense response to bacterium1.27E-02
160GO:0010311: lateral root formation1.39E-02
161GO:0010629: negative regulation of gene expression1.42E-02
162GO:0051555: flavonol biosynthetic process1.42E-02
163GO:0009870: defense response signaling pathway, resistance gene-dependent1.42E-02
164GO:0019538: protein metabolic process1.42E-02
165GO:0006032: chitin catabolic process1.42E-02
166GO:0009407: toxin catabolic process1.46E-02
167GO:0048527: lateral root development1.53E-02
168GO:0010119: regulation of stomatal movement1.53E-02
169GO:0009684: indoleacetic acid biosynthetic process1.57E-02
170GO:0019684: photosynthesis, light reaction1.57E-02
171GO:0009089: lysine biosynthetic process via diaminopimelate1.57E-02
172GO:0072593: reactive oxygen species metabolic process1.57E-02
173GO:1903507: negative regulation of nucleic acid-templated transcription1.57E-02
174GO:0048229: gametophyte development1.57E-02
175GO:0012501: programmed cell death1.73E-02
176GO:0002213: defense response to insect1.73E-02
177GO:0010105: negative regulation of ethylene-activated signaling pathway1.73E-02
178GO:0000266: mitochondrial fission1.73E-02
179GO:0009785: blue light signaling pathway1.90E-02
180GO:0055046: microgametogenesis1.90E-02
181GO:0009414: response to water deprivation1.94E-02
182GO:0006887: exocytosis2.00E-02
183GO:0006897: endocytosis2.00E-02
184GO:0046688: response to copper ion2.24E-02
185GO:0000162: tryptophan biosynthetic process2.42E-02
186GO:0006855: drug transmembrane transport2.54E-02
187GO:0009863: salicylic acid mediated signaling pathway2.61E-02
188GO:0006825: copper ion transport2.80E-02
189GO:0006486: protein glycosylation2.93E-02
190GO:0016998: cell wall macromolecule catabolic process2.99E-02
191GO:0016226: iron-sulfur cluster assembly3.19E-02
192GO:0009693: ethylene biosynthetic process3.40E-02
193GO:0007165: signal transduction3.43E-02
194GO:0009561: megagametogenesis3.60E-02
195GO:0009620: response to fungus3.81E-02
196GO:0070417: cellular response to cold3.82E-02
197GO:0042631: cellular response to water deprivation4.03E-02
198GO:0000271: polysaccharide biosynthetic process4.03E-02
199GO:0000413: protein peptidyl-prolyl isomerization4.03E-02
200GO:0080167: response to karrikin4.08E-02
201GO:0009624: response to nematode4.17E-02
202GO:0006885: regulation of pH4.25E-02
203GO:0006520: cellular amino acid metabolic process4.25E-02
204GO:0045489: pectin biosynthetic process4.25E-02
205GO:0009738: abscisic acid-activated signaling pathway4.52E-02
206GO:0009749: response to glucose4.71E-02
207GO:0015979: photosynthesis4.79E-02
208GO:0071554: cell wall organization or biogenesis4.94E-02
209GO:0000302: response to reactive oxygen species4.94E-02
210GO:0002229: defense response to oomycetes4.94E-02
RankGO TermAdjusted P value
1GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity0.00E+00
2GO:0050334: thiaminase activity0.00E+00
3GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
4GO:0005212: structural constituent of eye lens0.00E+00
5GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor0.00E+00
6GO:0030553: cGMP binding1.07E-05
7GO:0003978: UDP-glucose 4-epimerase activity1.07E-05
8GO:0030552: cAMP binding1.07E-05
9GO:0005216: ion channel activity2.11E-05
10GO:0030551: cyclic nucleotide binding6.00E-05
11GO:0005249: voltage-gated potassium channel activity6.00E-05
12GO:0050373: UDP-arabinose 4-epimerase activity1.29E-04
13GO:0047631: ADP-ribose diphosphatase activity1.98E-04
14GO:0016301: kinase activity2.58E-04
15GO:0000210: NAD+ diphosphatase activity2.80E-04
16GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity3.75E-04
17GO:0004012: phospholipid-translocating ATPase activity3.75E-04
18GO:2001227: quercitrin binding4.78E-04
19GO:0019707: protein-cysteine S-acyltransferase activity4.78E-04
20GO:2001147: camalexin binding4.78E-04
21GO:0015245: fatty acid transporter activity4.78E-04
22GO:0010285: L,L-diaminopimelate aminotransferase activity4.78E-04
23GO:0005544: calcium-dependent phospholipid binding6.01E-04
24GO:0019901: protein kinase binding8.59E-04
25GO:0015152: glucose-6-phosphate transmembrane transporter activity1.03E-03
26GO:0050403: trans-zeatin O-beta-D-glucosyltransferase activity1.03E-03
27GO:0050502: cis-zeatin O-beta-D-glucosyltransferase activity1.03E-03
28GO:0032934: sterol binding1.03E-03
29GO:0015036: disulfide oxidoreductase activity1.03E-03
30GO:0050736: O-malonyltransferase activity1.03E-03
31GO:0004385: guanylate kinase activity1.03E-03
32GO:0048531: beta-1,3-galactosyltransferase activity1.03E-03
33GO:0047364: desulfoglucosinolate sulfotransferase activity1.03E-03
34GO:0005516: calmodulin binding1.28E-03
35GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity1.68E-03
36GO:0004324: ferredoxin-NADP+ reductase activity1.68E-03
37GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity1.68E-03
38GO:0016531: copper chaperone activity1.68E-03
39GO:0032403: protein complex binding1.68E-03
40GO:0071917: triose-phosphate transmembrane transporter activity1.68E-03
41GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.80E-03
42GO:0030247: polysaccharide binding1.83E-03
43GO:0005509: calcium ion binding2.15E-03
44GO:0035529: NADH pyrophosphatase activity2.44E-03
45GO:0010178: IAA-amino acid conjugate hydrolase activity2.44E-03
46GO:0017077: oxidative phosphorylation uncoupler activity2.44E-03
47GO:0001046: core promoter sequence-specific DNA binding2.82E-03
48GO:0009916: alternative oxidase activity3.28E-03
49GO:0015120: phosphoglycerate transmembrane transporter activity3.28E-03
50GO:0004834: tryptophan synthase activity3.28E-03
51GO:0004675: transmembrane receptor protein serine/threonine kinase activity3.80E-03
52GO:0070696: transmembrane receptor protein serine/threonine kinase binding4.21E-03
53GO:0004499: N,N-dimethylaniline monooxygenase activity4.46E-03
54GO:0008519: ammonium transmembrane transporter activity5.21E-03
55GO:0033743: peptide-methionine (R)-S-oxide reductase activity6.28E-03
56GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides6.28E-03
57GO:0102391: decanoate--CoA ligase activity6.28E-03
58GO:0003950: NAD+ ADP-ribosyltransferase activity6.28E-03
59GO:0004144: diacylglycerol O-acyltransferase activity6.28E-03
60GO:0005261: cation channel activity6.28E-03
61GO:0004656: procollagen-proline 4-dioxygenase activity6.28E-03
62GO:0008113: peptide-methionine (S)-S-oxide reductase activity6.28E-03
63GO:0005524: ATP binding6.83E-03
64GO:0043295: glutathione binding7.43E-03
65GO:0004467: long-chain fatty acid-CoA ligase activity7.43E-03
66GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity8.65E-03
67GO:0047893: flavonol 3-O-glucosyltransferase activity8.65E-03
68GO:0004033: aldo-keto reductase (NADP) activity8.65E-03
69GO:0016757: transferase activity, transferring glycosyl groups8.72E-03
70GO:0008483: transaminase activity9.00E-03
71GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity9.00E-03
72GO:0008142: oxysterol binding9.94E-03
73GO:0004674: protein serine/threonine kinase activity1.07E-02
74GO:0071949: FAD binding1.13E-02
75GO:0008375: acetylglucosaminyltransferase activity1.13E-02
76GO:0004497: monooxygenase activity1.14E-02
77GO:0016758: transferase activity, transferring hexosyl groups1.16E-02
78GO:0004806: triglyceride lipase activity1.19E-02
79GO:0043565: sequence-specific DNA binding1.19E-02
80GO:0047617: acyl-CoA hydrolase activity1.27E-02
81GO:0030170: pyridoxal phosphate binding1.37E-02
82GO:0005545: 1-phosphatidylinositol binding1.42E-02
83GO:0015020: glucuronosyltransferase activity1.42E-02
84GO:0004864: protein phosphatase inhibitor activity1.42E-02
85GO:0004568: chitinase activity1.42E-02
86GO:0004842: ubiquitin-protein transferase activity1.48E-02
87GO:0004722: protein serine/threonine phosphatase activity1.72E-02
88GO:0005515: protein binding1.87E-02
89GO:0005315: inorganic phosphate transmembrane transporter activity1.90E-02
90GO:0050661: NADP binding1.92E-02
91GO:0008194: UDP-glycosyltransferase activity2.08E-02
92GO:0004364: glutathione transferase activity2.09E-02
93GO:0008146: sulfotransferase activity2.24E-02
94GO:0004190: aspartic-type endopeptidase activity2.24E-02
95GO:0016740: transferase activity2.26E-02
96GO:0003954: NADH dehydrogenase activity2.61E-02
97GO:0003714: transcription corepressor activity2.61E-02
98GO:0051536: iron-sulfur cluster binding2.61E-02
99GO:0031418: L-ascorbic acid binding2.61E-02
100GO:0051287: NAD binding2.64E-02
101GO:0035251: UDP-glucosyltransferase activity2.99E-02
102GO:0033612: receptor serine/threonine kinase binding2.99E-02
103GO:0019706: protein-cysteine S-palmitoyltransferase activity2.99E-02
104GO:0016298: lipase activity3.04E-02
105GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity3.19E-02
106GO:0008810: cellulase activity3.40E-02
107GO:0043531: ADP binding3.51E-02
108GO:0080044: quercetin 7-O-glucosyltransferase activity3.81E-02
109GO:0080043: quercetin 3-O-glucosyltransferase activity3.81E-02
110GO:0005451: monovalent cation:proton antiporter activity4.03E-02
111GO:0030276: clathrin binding4.25E-02
112GO:0005199: structural constituent of cell wall4.25E-02
113GO:0046872: metal ion binding4.36E-02
114GO:0015299: solute:proton antiporter activity4.48E-02
RankGO TermAdjusted P value
1GO:0019822: P4 peroxisome0.00E+00
2GO:0016021: integral component of membrane3.45E-08
3GO:0005886: plasma membrane3.01E-07
4GO:0005794: Golgi apparatus2.74E-06
5GO:0000138: Golgi trans cisterna4.78E-04
6GO:0031304: intrinsic component of mitochondrial inner membrane1.03E-03
7GO:0005901: caveola1.03E-03
8GO:0031314: extrinsic component of mitochondrial inner membrane1.03E-03
9GO:0008287: protein serine/threonine phosphatase complex1.68E-03
10GO:0009530: primary cell wall1.68E-03
11GO:0070062: extracellular exosome2.44E-03
12GO:0009506: plasmodesma3.36E-03
13GO:0000813: ESCRT I complex4.21E-03
14GO:0000164: protein phosphatase type 1 complex4.21E-03
15GO:0005802: trans-Golgi network4.46E-03
16GO:0016363: nuclear matrix6.28E-03
17GO:0005777: peroxisome6.77E-03
18GO:0032580: Golgi cisterna membrane8.47E-03
19GO:0005887: integral component of plasma membrane1.01E-02
20GO:0005743: mitochondrial inner membrane1.84E-02
21GO:0005795: Golgi stack2.24E-02
22GO:0005769: early endosome2.42E-02
23GO:0046658: anchored component of plasma membrane2.57E-02
24GO:0005758: mitochondrial intermembrane space2.61E-02
25GO:0070469: respiratory chain2.80E-02
26GO:0005741: mitochondrial outer membrane2.99E-02
27GO:0005905: clathrin-coated pit2.99E-02
28GO:0030136: clathrin-coated vesicle3.82E-02
29GO:0005770: late endosome4.25E-02
30GO:0005768: endosome4.40E-02
31GO:0005789: endoplasmic reticulum membrane4.43E-02
32GO:0005774: vacuolar membrane4.45E-02
33GO:0009504: cell plate4.71E-02
34GO:0031965: nuclear membrane4.71E-02
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Gene type



Gene DE type