co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G12685

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process	0.00E+00
2	GO:0006429: leucyl-tRNA aminoacylation	0.00E+00
3	GO:0043488: regulation of mRNA stability	0.00E+00
4	GO:0000455: enzyme-directed rRNA pseudouridine synthesis	0.00E+00
5	GO:0090279: regulation of calcium ion import	0.00E+00
6	GO:0006780: uroporphyrinogen III biosynthetic process	0.00E+00
7	GO:0042820: vitamin B6 catabolic process	0.00E+00
8	GO:1904966: positive regulation of vitamin E biosynthetic process	0.00E+00
9	GO:1902326: positive regulation of chlorophyll biosynthetic process	0.00E+00
10	GO:0000489: maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	0.00E+00
11	GO:0042821: pyridoxal biosynthetic process	0.00E+00
12	GO:0035970: peptidyl-threonine dephosphorylation	0.00E+00
13	GO:0000488: maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	0.00E+00
14	GO:0008298: intracellular mRNA localization	0.00E+00
15	GO:1904964: positive regulation of phytol biosynthetic process	0.00E+00
16	GO:0015882: L-ascorbic acid transport	0.00E+00
17	GO:0071474: cellular hyperosmotic response	0.00E+00
18	GO:0018023: peptidyl-lysine trimethylation	0.00E+00
19	GO:0009658: chloroplast organization	1.31E-08
20	GO:0015979: photosynthesis	7.40E-06
21	GO:0005977: glycogen metabolic process	3.63E-05
22	GO:0010239: chloroplast mRNA processing	7.78E-05
23	GO:0019252: starch biosynthetic process	9.86E-05
24	GO:0032502: developmental process	1.26E-04
25	GO:0009765: photosynthesis, light harvesting	1.35E-04
26	GO:0006021: inositol biosynthetic process	1.35E-04
27	GO:0010021: amylopectin biosynthetic process	1.35E-04
28	GO:0010027: thylakoid membrane organization	2.15E-04
29	GO:0015995: chlorophyll biosynthetic process	2.84E-04
30	GO:1901259: chloroplast rRNA processing	3.92E-04
31	GO:0070574: cadmium ion transmembrane transport	4.92E-04
32	GO:0010028: xanthophyll cycle	4.92E-04
33	GO:0034337: RNA folding	4.92E-04
34	GO:0000476: maturation of 4.5S rRNA	4.92E-04
35	GO:0009443: pyridoxal 5'-phosphate salvage	4.92E-04
36	GO:0000967: rRNA 5'-end processing	4.92E-04
37	GO:0046467: membrane lipid biosynthetic process	4.92E-04
38	GO:1902478: negative regulation of defense response to bacterium, incompatible interaction	4.92E-04
39	GO:0031426: polycistronic mRNA processing	4.92E-04
40	GO:0006637: acyl-CoA metabolic process	4.92E-04
41	GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process	4.92E-04
42	GO:0043953: protein transport by the Tat complex	4.92E-04
43	GO:0000481: maturation of 5S rRNA	4.92E-04
44	GO:0006659: phosphatidylserine biosynthetic process	4.92E-04
45	GO:0042371: vitamin K biosynthetic process	4.92E-04
46	GO:0065002: intracellular protein transmembrane transport	4.92E-04
47	GO:0051775: response to redox state	4.92E-04
48	GO:0043686: co-translational protein modification	4.92E-04
49	GO:0071461: cellular response to redox state	4.92E-04
50	GO:0071482: cellular response to light stimulus	7.64E-04
51	GO:0009791: post-embryonic development	9.06E-04
52	GO:0010024: phytochromobilin biosynthetic process	1.06E-03
53	GO:0051262: protein tetramerization	1.06E-03
54	GO:0034470: ncRNA processing	1.06E-03
55	GO:0080005: photosystem stoichiometry adjustment	1.06E-03
56	GO:1900871: chloroplast mRNA modification	1.06E-03
57	GO:0010541: acropetal auxin transport	1.06E-03
58	GO:0018026: peptidyl-lysine monomethylation	1.06E-03
59	GO:0000256: allantoin catabolic process	1.06E-03
60	GO:0034755: iron ion transmembrane transport	1.06E-03
61	GO:1904143: positive regulation of carotenoid biosynthetic process	1.06E-03
62	GO:0071457: cellular response to ozone	1.06E-03
63	GO:0019684: photosynthesis, light reaction	1.45E-03
64	GO:0043085: positive regulation of catalytic activity	1.45E-03
65	GO:0009773: photosynthetic electron transport in photosystem I	1.45E-03
66	GO:0006954: inflammatory response	1.73E-03
67	GO:0090391: granum assembly	1.73E-03
68	GO:0010136: ureide catabolic process	1.73E-03
69	GO:0034051: negative regulation of plant-type hypersensitive response	1.73E-03
70	GO:0006788: heme oxidation	1.73E-03
71	GO:0015940: pantothenate biosynthetic process	1.73E-03
72	GO:0010160: formation of animal organ boundary	1.73E-03
73	GO:0009767: photosynthetic electron transport chain	1.88E-03
74	GO:0018298: protein-chromophore linkage	2.21E-03
75	GO:0019853: L-ascorbic acid biosynthetic process	2.38E-03
76	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	2.51E-03
77	GO:0006166: purine ribonucleoside salvage	2.51E-03
78	GO:0071484: cellular response to light intensity	2.51E-03
79	GO:0009052: pentose-phosphate shunt, non-oxidative branch	2.51E-03
80	GO:0009152: purine ribonucleotide biosynthetic process	2.51E-03
81	GO:0009226: nucleotide-sugar biosynthetic process	2.51E-03
82	GO:0046653: tetrahydrofolate metabolic process	2.51E-03
83	GO:0006107: oxaloacetate metabolic process	2.51E-03
84	GO:0010731: protein glutathionylation	2.51E-03
85	GO:0043481: anthocyanin accumulation in tissues in response to UV light	2.51E-03
86	GO:0006168: adenine salvage	2.51E-03
87	GO:0006145: purine nucleobase catabolic process	2.51E-03
88	GO:0071786: endoplasmic reticulum tubular network organization	2.51E-03
89	GO:0051016: barbed-end actin filament capping	2.51E-03
90	GO:2001141: regulation of RNA biosynthetic process	2.51E-03
91	GO:0016556: mRNA modification	2.51E-03
92	GO:0090308: regulation of methylation-dependent chromatin silencing	2.51E-03
93	GO:0007017: microtubule-based process	3.26E-03
94	GO:0015976: carbon utilization	3.38E-03
95	GO:0071486: cellular response to high light intensity	3.38E-03
96	GO:0010107: potassium ion import	3.38E-03
97	GO:2000122: negative regulation of stomatal complex development	3.38E-03
98	GO:0031122: cytoplasmic microtubule organization	3.38E-03
99	GO:0006546: glycine catabolic process	3.38E-03
100	GO:0006109: regulation of carbohydrate metabolic process	3.38E-03
101	GO:0006734: NADH metabolic process	3.38E-03
102	GO:0010037: response to carbon dioxide	3.38E-03
103	GO:0031365: N-terminal protein amino acid modification	4.33E-03
104	GO:0009107: lipoate biosynthetic process	4.33E-03
105	GO:0044209: AMP salvage	4.33E-03
106	GO:0080110: sporopollenin biosynthetic process	4.33E-03
107	GO:0006465: signal peptide processing	4.33E-03
108	GO:0032543: mitochondrial translation	4.33E-03
109	GO:0098719: sodium ion import across plasma membrane	4.33E-03
110	GO:0071493: cellular response to UV-B	4.33E-03
111	GO:0006564: L-serine biosynthetic process	4.33E-03
112	GO:0045038: protein import into chloroplast thylakoid membrane	4.33E-03
113	GO:0055114: oxidation-reduction process	5.13E-03
114	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	5.37E-03
115	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	5.37E-03
116	GO:0060918: auxin transport	5.37E-03
117	GO:0010190: cytochrome b6f complex assembly	5.37E-03
118	GO:0032973: amino acid export	5.37E-03
119	GO:0050665: hydrogen peroxide biosynthetic process	5.37E-03
120	GO:0000741: karyogamy	5.37E-03
121	GO:0046855: inositol phosphate dephosphorylation	5.37E-03
122	GO:0009416: response to light stimulus	5.63E-03
123	GO:0009958: positive gravitropism	5.89E-03
124	GO:0010019: chloroplast-nucleus signaling pathway	6.48E-03
125	GO:0071333: cellular response to glucose stimulus	6.48E-03
126	GO:0048280: vesicle fusion with Golgi apparatus	6.48E-03
127	GO:0010189: vitamin E biosynthetic process	6.48E-03
128	GO:0009854: oxidative photosynthetic carbon pathway	6.48E-03
129	GO:0008654: phospholipid biosynthetic process	6.80E-03
130	GO:0009772: photosynthetic electron transport in photosystem II	7.66E-03
131	GO:0043090: amino acid import	7.66E-03
132	GO:1900056: negative regulation of leaf senescence	7.66E-03
133	GO:0051693: actin filament capping	7.66E-03
134	GO:0009645: response to low light intensity stimulus	7.66E-03
135	GO:0006400: tRNA modification	7.66E-03
136	GO:0009769: photosynthesis, light harvesting in photosystem II	7.66E-03
137	GO:0055075: potassium ion homeostasis	8.92E-03
138	GO:0052543: callose deposition in cell wall	8.92E-03
139	GO:0016559: peroxisome fission	8.92E-03
140	GO:0007155: cell adhesion	8.92E-03
141	GO:0048564: photosystem I assembly	8.92E-03
142	GO:0009690: cytokinin metabolic process	8.92E-03
143	GO:0010078: maintenance of root meristem identity	8.92E-03
144	GO:0032508: DNA duplex unwinding	8.92E-03
145	GO:0042255: ribosome assembly	8.92E-03
146	GO:0006353: DNA-templated transcription, termination	8.92E-03
147	GO:0006875: cellular metal ion homeostasis	8.92E-03
148	GO:0043562: cellular response to nitrogen levels	1.03E-02
149	GO:0017004: cytochrome complex assembly	1.03E-02
150	GO:0019430: removal of superoxide radicals	1.03E-02
151	GO:0010204: defense response signaling pathway, resistance gene-independent	1.03E-02
152	GO:0032544: plastid translation	1.03E-02
153	GO:0009657: plastid organization	1.03E-02
154	GO:0009821: alkaloid biosynthetic process	1.17E-02
155	GO:0098656: anion transmembrane transport	1.17E-02
156	GO:0080144: amino acid homeostasis	1.17E-02
157	GO:0090333: regulation of stomatal closure	1.17E-02
158	GO:0048507: meristem development	1.17E-02
159	GO:0080167: response to karrikin	1.22E-02
160	GO:0051453: regulation of intracellular pH	1.31E-02
161	GO:0005982: starch metabolic process	1.31E-02
162	GO:0006779: porphyrin-containing compound biosynthetic process	1.31E-02
163	GO:0010380: regulation of chlorophyll biosynthetic process	1.31E-02
164	GO:0045036: protein targeting to chloroplast	1.46E-02
165	GO:0006896: Golgi to vacuole transport	1.46E-02
166	GO:0006782: protoporphyrinogen IX biosynthetic process	1.46E-02
167	GO:0019538: protein metabolic process	1.46E-02
168	GO:0010218: response to far red light	1.53E-02
169	GO:0009409: response to cold	1.55E-02
170	GO:0048527: lateral root development	1.60E-02
171	GO:0010216: maintenance of DNA methylation	1.62E-02
172	GO:0009684: indoleacetic acid biosynthetic process	1.62E-02
173	GO:0009089: lysine biosynthetic process via diaminopimelate	1.62E-02
174	GO:0006879: cellular iron ion homeostasis	1.62E-02
175	GO:0006352: DNA-templated transcription, initiation	1.62E-02
176	GO:0006415: translational termination	1.62E-02
177	GO:0009637: response to blue light	1.76E-02
178	GO:0008361: regulation of cell size	1.79E-02
179	GO:0006790: sulfur compound metabolic process	1.79E-02
180	GO:0034599: cellular response to oxidative stress	1.84E-02
181	GO:0030036: actin cytoskeleton organization	1.96E-02
182	GO:0009718: anthocyanin-containing compound biosynthetic process	1.96E-02
183	GO:0030048: actin filament-based movement	1.96E-02
184	GO:0010588: cotyledon vascular tissue pattern formation	1.96E-02
185	GO:0006108: malate metabolic process	1.96E-02
186	GO:0010540: basipetal auxin transport	2.13E-02
187	GO:0010207: photosystem II assembly	2.13E-02
188	GO:0048467: gynoecium development	2.13E-02
189	GO:0007015: actin filament organization	2.13E-02
190	GO:0010020: chloroplast fission	2.13E-02
191	GO:0046854: phosphatidylinositol phosphorylation	2.31E-02
192	GO:0008380: RNA splicing	2.39E-02
193	GO:0009644: response to high light intensity	2.46E-02
194	GO:0055085: transmembrane transport	2.61E-02
195	GO:0008299: isoprenoid biosynthetic process	2.89E-02
196	GO:0006418: tRNA aminoacylation for protein translation	2.89E-02
197	GO:0009768: photosynthesis, light harvesting in photosystem I	2.89E-02
198	GO:0019915: lipid storage	3.09E-02
199	GO:0009269: response to desiccation	3.09E-02
200	GO:0019748: secondary metabolic process	3.29E-02
201	GO:0006730: one-carbon metabolic process	3.29E-02
202	GO:0006012: galactose metabolic process	3.50E-02
203	GO:0071215: cellular response to abscisic acid stimulus	3.50E-02
204	GO:0009686: gibberellin biosynthetic process	3.50E-02
205	GO:0043086: negative regulation of catalytic activity	3.62E-02
206	GO:0010584: pollen exine formation	3.72E-02
207	GO:0048443: stamen development	3.72E-02
208	GO:0009306: protein secretion	3.72E-02
209	GO:0016117: carotenoid biosynthetic process	3.94E-02
210	GO:0042147: retrograde transport, endosome to Golgi	3.94E-02
211	GO:0080022: primary root development	4.16E-02
212	GO:0010087: phloem or xylem histogenesis	4.16E-02
213	GO:0009741: response to brassinosteroid	4.39E-02
214	GO:0006885: regulation of pH	4.39E-02
215	GO:0010268: brassinosteroid homeostasis	4.39E-02
216	GO:0006520: cellular amino acid metabolic process	4.39E-02
217	GO:0045489: pectin biosynthetic process	4.39E-02
218	GO:0006662: glycerol ether metabolic process	4.39E-02
219	GO:0071472: cellular response to salt stress	4.39E-02
220	GO:0010197: polar nucleus fusion	4.39E-02
221	GO:0006810: transport	4.46E-02
222	GO:0006814: sodium ion transport	4.62E-02
223	GO:0009646: response to absence of light	4.62E-02
224	GO:0015986: ATP synthesis coupled proton transport	4.62E-02
225	GO:0005975: carbohydrate metabolic process	4.73E-02
226	GO:0055072: iron ion homeostasis	4.85E-02
227	GO:0009851: auxin biosynthetic process	4.85E-02
228	GO:0048825: cotyledon development	4.85E-02
229	GO:0006623: protein targeting to vacuole	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity	0.00E+00
2	GO:0004852: uroporphyrinogen-III synthase activity	0.00E+00
3	GO:0036361: racemase activity, acting on amino acids and derivatives	0.00E+00
4	GO:0010349: L-galactose dehydrogenase activity	0.00E+00
5	GO:0046554: malate dehydrogenase (NADP+) activity	0.00E+00
6	GO:0010276: phytol kinase activity	0.00E+00
7	GO:0008807: carboxyvinyl-carboxyphosphonate phosphorylmutase activity	0.00E+00
8	GO:0050236: pyridoxine:NADP 4-dehydrogenase activity	0.00E+00
9	GO:0015229: L-ascorbic acid transporter activity	0.00E+00
10	GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives	0.00E+00
11	GO:0004823: leucine-tRNA ligase activity	0.00E+00
12	GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity	0.00E+00
13	GO:0019156: isoamylase activity	1.06E-05
14	GO:0019899: enzyme binding	1.82E-05
15	GO:0070402: NADPH binding	3.63E-05
16	GO:0009011: starch synthase activity	1.35E-04
17	GO:0043495: protein anchor	1.35E-04
18	GO:0004556: alpha-amylase activity	2.93E-04
19	GO:0042802: identical protein binding	3.60E-04
20	GO:0010347: L-galactose-1-phosphate phosphatase activity	4.92E-04
21	GO:0046906: tetrapyrrole binding	4.92E-04
22	GO:0051777: ent-kaurenoate oxidase activity	4.92E-04
23	GO:0004856: xylulokinase activity	4.92E-04
24	GO:0005227: calcium activated cation channel activity	4.92E-04
25	GO:0008568: microtubule-severing ATPase activity	4.92E-04
26	GO:0003864: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity	4.92E-04
27	GO:0005080: protein kinase C binding	4.92E-04
28	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	4.92E-04
29	GO:0008746: NAD(P)+ transhydrogenase activity	4.92E-04
30	GO:0042586: peptide deformylase activity	4.92E-04
31	GO:0004328: formamidase activity	4.92E-04
32	GO:0004033: aldo-keto reductase (NADP) activity	6.27E-04
33	GO:0004326: tetrahydrofolylpolyglutamate synthase activity	1.06E-03
34	GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity	1.06E-03
35	GO:0009977: proton motive force dependent protein transmembrane transporter activity	1.06E-03
36	GO:0004617: phosphoglycerate dehydrogenase activity	1.06E-03
37	GO:0004047: aminomethyltransferase activity	1.06E-03
38	GO:0080097: L-tryptophan:pyruvate aminotransferase activity	1.06E-03
39	GO:0052832: inositol monophosphate 3-phosphatase activity	1.06E-03
40	GO:0033201: alpha-1,4-glucan synthase activity	1.06E-03
41	GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase	1.06E-03
42	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	1.06E-03
43	GO:0008934: inositol monophosphate 1-phosphatase activity	1.06E-03
44	GO:0052833: inositol monophosphate 4-phosphatase activity	1.06E-03
45	GO:0004512: inositol-3-phosphate synthase activity	1.06E-03
46	GO:0048531: beta-1,3-galactosyltransferase activity	1.06E-03
47	GO:0004103: choline kinase activity	1.06E-03
48	GO:0016168: chlorophyll binding	1.69E-03
49	GO:0008864: formyltetrahydrofolate deformylase activity	1.73E-03
50	GO:0004373: glycogen (starch) synthase activity	1.73E-03
51	GO:0016992: lipoate synthase activity	1.73E-03
52	GO:0003913: DNA photolyase activity	1.73E-03
53	GO:0002161: aminoacyl-tRNA editing activity	1.73E-03
54	GO:0004751: ribose-5-phosphate isomerase activity	1.73E-03
55	GO:0004848: ureidoglycolate hydrolase activity	1.73E-03
56	GO:0016742: hydroxymethyl-, formyl- and related transferase activity	1.73E-03
57	GO:0005525: GTP binding	1.76E-03
58	GO:0003924: GTPase activity	1.80E-03
59	GO:0016491: oxidoreductase activity	2.04E-03
60	GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity	2.51E-03
61	GO:0001872: (1->3)-beta-D-glucan binding	2.51E-03
62	GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity	2.51E-03
63	GO:0003999: adenine phosphoribosyltransferase activity	2.51E-03
64	GO:0015086: cadmium ion transmembrane transporter activity	2.51E-03
65	GO:0048027: mRNA 5'-UTR binding	2.51E-03
66	GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	2.51E-03
67	GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity	2.51E-03
68	GO:0016851: magnesium chelatase activity	2.51E-03
69	GO:0016279: protein-lysine N-methyltransferase activity	3.38E-03
70	GO:0001053: plastid sigma factor activity	3.38E-03
71	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	3.38E-03
72	GO:0045430: chalcone isomerase activity	3.38E-03
73	GO:0004045: aminoacyl-tRNA hydrolase activity	3.38E-03
74	GO:0080032: methyl jasmonate esterase activity	3.38E-03
75	GO:0016987: sigma factor activity	3.38E-03
76	GO:0004392: heme oxygenase (decyclizing) activity	3.38E-03
77	GO:0008891: glycolate oxidase activity	3.38E-03
78	GO:0022891: substrate-specific transmembrane transporter activity	4.28E-03
79	GO:0016846: carbon-sulfur lyase activity	4.33E-03
80	GO:0016773: phosphotransferase activity, alcohol group as acceptor	4.33E-03
81	GO:0008200: ion channel inhibitor activity	5.37E-03
82	GO:0004605: phosphatidate cytidylyltransferase activity	5.37E-03
83	GO:0080030: methyl indole-3-acetate esterase activity	5.37E-03
84	GO:0004784: superoxide dismutase activity	5.37E-03
85	GO:0015081: sodium ion transmembrane transporter activity	5.37E-03
86	GO:0016615: malate dehydrogenase activity	5.37E-03
87	GO:0008195: phosphatidate phosphatase activity	6.48E-03
88	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	6.48E-03
89	GO:0003730: mRNA 3'-UTR binding	6.48E-03
90	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	6.48E-03
91	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	6.48E-03
92	GO:0030060: L-malate dehydrogenase activity	6.48E-03
93	GO:0005261: cation channel activity	6.48E-03
94	GO:0048038: quinone binding	7.28E-03
95	GO:0015103: inorganic anion transmembrane transporter activity	7.66E-03
96	GO:0016788: hydrolase activity, acting on ester bonds	9.04E-03
97	GO:0005200: structural constituent of cytoskeleton	9.40E-03
98	GO:0003824: catalytic activity	9.93E-03
99	GO:0008135: translation factor activity, RNA binding	1.03E-02
100	GO:0003723: RNA binding	1.07E-02
101	GO:0003747: translation release factor activity	1.17E-02
102	GO:0016844: strictosidine synthase activity	1.31E-02
103	GO:0005381: iron ion transmembrane transporter activity	1.31E-02
104	GO:0047617: acyl-CoA hydrolase activity	1.31E-02
105	GO:0008047: enzyme activator activity	1.46E-02
106	GO:0015020: glucuronosyltransferase activity	1.46E-02
107	GO:0008559: xenobiotic-transporting ATPase activity	1.62E-02
108	GO:0015386: potassium:proton antiporter activity	1.62E-02
109	GO:0008378: galactosyltransferase activity	1.79E-02
110	GO:0003993: acid phosphatase activity	1.84E-02
111	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.92E-02
112	GO:0004089: carbonate dehydratase activity	1.96E-02
113	GO:0009982: pseudouridine synthase activity	1.96E-02
114	GO:0003725: double-stranded RNA binding	1.96E-02
115	GO:0004022: alcohol dehydrogenase (NAD) activity	1.96E-02
116	GO:0010329: auxin efflux transmembrane transporter activity	1.96E-02
117	GO:0005315: inorganic phosphate transmembrane transporter activity	1.96E-02
118	GO:0003774: motor activity	2.13E-02
119	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	2.13E-02
120	GO:0004185: serine-type carboxypeptidase activity	2.27E-02
121	GO:0035091: phosphatidylinositol binding	2.46E-02
122	GO:0031409: pigment binding	2.50E-02
123	GO:0004857: enzyme inhibitor activity	2.69E-02
124	GO:0005528: FK506 binding	2.69E-02
125	GO:0003690: double-stranded DNA binding	3.17E-02
126	GO:0008514: organic anion transmembrane transporter activity	3.72E-02
127	GO:0003727: single-stranded RNA binding	3.72E-02
128	GO:0004812: aminoacyl-tRNA ligase activity	3.94E-02
129	GO:0047134: protein-disulfide reductase activity	3.94E-02
130	GO:0046873: metal ion transmembrane transporter activity	4.39E-02
131	GO:0008080: N-acetyltransferase activity	4.39E-02
132	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	4.39E-02
133	GO:0004791: thioredoxin-disulfide reductase activity	4.62E-02
134	GO:0016853: isomerase activity	4.62E-02
135	GO:0050662: coenzyme binding	4.62E-02
136	GO:0010181: FMN binding	4.62E-02
137	GO:0052689: carboxylic ester hydrolase activity	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0043235: receptor complex	0.00E+00
2	GO:0010368: chloroplast isoamylase complex	0.00E+00
3	GO:0009507: chloroplast	3.83E-38
4	GO:0009570: chloroplast stroma	2.72E-14
5	GO:0009535: chloroplast thylakoid membrane	4.74E-11
6	GO:0009941: chloroplast envelope	8.36E-07
7	GO:0009543: chloroplast thylakoid lumen	1.18E-05
8	GO:0009654: photosystem II oxygen evolving complex	2.30E-05
9	GO:0033281: TAT protein transport complex	3.63E-05
10	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	5.15E-05
11	GO:0009579: thylakoid	2.40E-04
12	GO:0031361: integral component of thylakoid membrane	4.92E-04
13	GO:0005787: signal peptidase complex	4.92E-04
14	GO:0009344: nitrite reductase complex [NAD(P)H]	4.92E-04
15	GO:0009501: amyloplast	6.27E-04
16	GO:0031977: thylakoid lumen	6.40E-04
17	GO:0019898: extrinsic component of membrane	9.06E-04
18	GO:0009523: photosystem II	9.06E-04
19	GO:0042644: chloroplast nucleoid	9.13E-04
20	GO:0080085: signal recognition particle, chloroplast targeting	1.06E-03
21	GO:0008290: F-actin capping protein complex	1.06E-03
22	GO:0010007: magnesium chelatase complex	1.73E-03
23	GO:0009706: chloroplast inner membrane	1.95E-03
24	GO:0030095: chloroplast photosystem II	2.13E-03
25	GO:0009707: chloroplast outer membrane	2.21E-03
26	GO:0015630: microtubule cytoskeleton	2.51E-03
27	GO:0042646: plastid nucleoid	2.51E-03
28	GO:0071782: endoplasmic reticulum tubular network	2.51E-03
29	GO:0030658: transport vesicle membrane	2.51E-03
30	GO:0009534: chloroplast thylakoid	2.65E-03
31	GO:0031969: chloroplast membrane	3.24E-03
32	GO:0042651: thylakoid membrane	3.26E-03
33	GO:0009517: PSII associated light-harvesting complex II	3.38E-03
34	GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1)	5.37E-03
35	GO:0009522: photosystem I	6.34E-03
36	GO:0012507: ER to Golgi transport vesicle membrane	8.92E-03
37	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	8.92E-03
38	GO:0010319: stromule	9.40E-03
39	GO:0009539: photosystem II reaction center	1.03E-02
40	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	1.03E-02
41	GO:0016021: integral component of membrane	1.09E-02
42	GO:0045298: tubulin complex	1.17E-02
43	GO:0005720: nuclear heterochromatin	1.17E-02
44	GO:0005623: cell	1.31E-02
45	GO:0016459: myosin complex	1.46E-02
46	GO:0032040: small-subunit processome	1.79E-02
47	GO:0009508: plastid chromosome	1.96E-02
48	GO:0030076: light-harvesting complex	2.31E-02
49	GO:0005874: microtubule	4.13E-02