GO Enrichment Analysis of Co-expressed Genes with
AT3G11270
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0036503: ERAD pathway | 0.00E+00 |
| 2 | GO:0046686: response to cadmium ion | 3.83E-05 |
| 3 | GO:1900424: regulation of defense response to bacterium | 4.18E-05 |
| 4 | GO:0050688: regulation of defense response to virus | 1.04E-04 |
| 5 | GO:0035335: peptidyl-tyrosine dephosphorylation | 1.04E-04 |
| 6 | GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine | 1.04E-04 |
| 7 | GO:0031124: mRNA 3'-end processing | 1.04E-04 |
| 8 | GO:0002679: respiratory burst involved in defense response | 2.63E-04 |
| 9 | GO:0071786: endoplasmic reticulum tubular network organization | 2.63E-04 |
| 10 | GO:0033320: UDP-D-xylose biosynthetic process | 3.53E-04 |
| 11 | GO:0006511: ubiquitin-dependent protein catabolic process | 4.42E-04 |
| 12 | GO:0043248: proteasome assembly | 5.51E-04 |
| 13 | GO:0042732: D-xylose metabolic process | 5.51E-04 |
| 14 | GO:0047484: regulation of response to osmotic stress | 5.51E-04 |
| 15 | GO:0048827: phyllome development | 5.51E-04 |
| 16 | GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation | 5.51E-04 |
| 17 | GO:0009612: response to mechanical stimulus | 6.58E-04 |
| 18 | GO:0006491: N-glycan processing | 8.84E-04 |
| 19 | GO:0048766: root hair initiation | 8.84E-04 |
| 20 | GO:0050821: protein stabilization | 8.84E-04 |
| 21 | GO:0009932: cell tip growth | 1.00E-03 |
| 22 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.05E-03 |
| 23 | GO:0006379: mRNA cleavage | 1.13E-03 |
| 24 | GO:0009651: response to salt stress | 1.14E-03 |
| 25 | GO:0043067: regulation of programmed cell death | 1.25E-03 |
| 26 | GO:0072593: reactive oxygen species metabolic process | 1.53E-03 |
| 27 | GO:0048765: root hair cell differentiation | 1.53E-03 |
| 28 | GO:0006378: mRNA polyadenylation | 1.53E-03 |
| 29 | GO:0046856: phosphatidylinositol dephosphorylation | 1.53E-03 |
| 30 | GO:0006790: sulfur compound metabolic process | 1.67E-03 |
| 31 | GO:0046854: phosphatidylinositol phosphorylation | 2.13E-03 |
| 32 | GO:0010053: root epidermal cell differentiation | 2.13E-03 |
| 33 | GO:0009225: nucleotide-sugar metabolic process | 2.13E-03 |
| 34 | GO:0034976: response to endoplasmic reticulum stress | 2.29E-03 |
| 35 | GO:0042023: DNA endoreduplication | 2.29E-03 |
| 36 | GO:0000027: ribosomal large subunit assembly | 2.46E-03 |
| 37 | GO:0010228: vegetative to reproductive phase transition of meristem | 2.54E-03 |
| 38 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 2.71E-03 |
| 39 | GO:0010431: seed maturation | 2.80E-03 |
| 40 | GO:0080092: regulation of pollen tube growth | 2.97E-03 |
| 41 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 3.52E-03 |
| 42 | GO:0010154: fruit development | 3.91E-03 |
| 43 | GO:0010183: pollen tube guidance | 4.31E-03 |
| 44 | GO:0000302: response to reactive oxygen species | 4.51E-03 |
| 45 | GO:0045454: cell redox homeostasis | 5.51E-03 |
| 46 | GO:0009816: defense response to bacterium, incompatible interaction | 6.04E-03 |
| 47 | GO:0009817: defense response to fungus, incompatible interaction | 6.98E-03 |
| 48 | GO:0010043: response to zinc ion | 7.72E-03 |
| 49 | GO:0034599: cellular response to oxidative stress | 8.48E-03 |
| 50 | GO:0009926: auxin polar transport | 9.82E-03 |
| 51 | GO:0009735: response to cytokinin | 1.10E-02 |
| 52 | GO:0006486: protein glycosylation | 1.21E-02 |
| 53 | GO:0048316: seed development | 1.39E-02 |
| 54 | GO:0009626: plant-type hypersensitive response | 1.43E-02 |
| 55 | GO:0009553: embryo sac development | 1.52E-02 |
| 56 | GO:0006457: protein folding | 1.56E-02 |
| 57 | GO:0051726: regulation of cell cycle | 1.62E-02 |
| 58 | GO:0042744: hydrogen peroxide catabolic process | 2.00E-02 |
| 59 | GO:0009790: embryo development | 2.03E-02 |
| 60 | GO:0006979: response to oxidative stress | 2.47E-02 |
| 61 | GO:0006470: protein dephosphorylation | 2.52E-02 |
| 62 | GO:0009617: response to bacterium | 2.60E-02 |
| 63 | GO:0042254: ribosome biogenesis | 3.17E-02 |
| 64 | GO:0009860: pollen tube growth | 3.30E-02 |
| 65 | GO:0048364: root development | 4.96E-02 |
| 66 | GO:0006397: mRNA processing | 4.96E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004298: threonine-type endopeptidase activity | 1.46E-08 |
| 2 | GO:0008233: peptidase activity | 2.30E-06 |
| 3 | GO:0004725: protein tyrosine phosphatase activity | 8.51E-05 |
| 4 | GO:0051731: polynucleotide 5'-hydroxyl-kinase activity | 1.04E-04 |
| 5 | GO:0035241: protein-arginine omega-N monomethyltransferase activity | 1.04E-04 |
| 6 | GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity | 1.04E-04 |
| 7 | GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity | 1.04E-04 |
| 8 | GO:0051879: Hsp90 protein binding | 1.04E-04 |
| 9 | GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity | 1.78E-04 |
| 10 | GO:0008469: histone-arginine N-methyltransferase activity | 1.78E-04 |
| 11 | GO:0004571: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity | 2.63E-04 |
| 12 | GO:0004130: cytochrome-c peroxidase activity | 5.51E-04 |
| 13 | GO:0031593: polyubiquitin binding | 5.51E-04 |
| 14 | GO:0016688: L-ascorbate peroxidase activity | 5.51E-04 |
| 15 | GO:0048040: UDP-glucuronate decarboxylase activity | 5.51E-04 |
| 16 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 6.58E-04 |
| 17 | GO:0004559: alpha-mannosidase activity | 6.58E-04 |
| 18 | GO:0070403: NAD+ binding | 6.58E-04 |
| 19 | GO:0004722: protein serine/threonine phosphatase activity | 7.94E-04 |
| 20 | GO:0004190: aspartic-type endopeptidase activity | 2.13E-03 |
| 21 | GO:0043130: ubiquitin binding | 2.46E-03 |
| 22 | GO:0043424: protein histidine kinase binding | 2.62E-03 |
| 23 | GO:0004540: ribonuclease activity | 2.80E-03 |
| 24 | GO:0003756: protein disulfide isomerase activity | 3.33E-03 |
| 25 | GO:0047134: protein-disulfide reductase activity | 3.52E-03 |
| 26 | GO:0004791: thioredoxin-disulfide reductase activity | 4.11E-03 |
| 27 | GO:0004721: phosphoprotein phosphatase activity | 6.50E-03 |
| 28 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 7.47E-03 |
| 29 | GO:0016887: ATPase activity | 1.05E-02 |
| 30 | GO:0016787: hydrolase activity | 1.20E-02 |
| 31 | GO:0051082: unfolded protein binding | 1.55E-02 |
| 32 | GO:0030246: carbohydrate binding | 1.63E-02 |
| 33 | GO:0005509: calcium ion binding | 2.26E-02 |
| 34 | GO:0008168: methyltransferase activity | 3.05E-02 |
| 35 | GO:0004601: peroxidase activity | 3.13E-02 |
| 36 | GO:0061630: ubiquitin protein ligase activity | 3.78E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000327: lytic vacuole within protein storage vacuole | 0.00E+00 |
| 2 | GO:0019867: outer membrane | 0.00E+00 |
| 3 | GO:0005839: proteasome core complex | 1.46E-08 |
| 4 | GO:0000502: proteasome complex | 3.70E-08 |
| 5 | GO:0019773: proteasome core complex, alpha-subunit complex | 1.85E-05 |
| 6 | GO:0005829: cytosol | 3.85E-05 |
| 7 | GO:0005783: endoplasmic reticulum | 4.68E-05 |
| 8 | GO:0071782: endoplasmic reticulum tubular network | 2.63E-04 |
| 9 | GO:0005849: mRNA cleavage factor complex | 2.63E-04 |
| 10 | GO:0005788: endoplasmic reticulum lumen | 3.89E-04 |
| 11 | GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane | 8.84E-04 |
| 12 | GO:0000326: protein storage vacuole | 1.00E-03 |
| 13 | GO:0031307: integral component of mitochondrial outer membrane | 1.67E-03 |
| 14 | GO:0016592: mediator complex | 4.72E-03 |
| 15 | GO:0005773: vacuole | 1.01E-02 |
| 16 | GO:0005737: cytoplasm | 1.06E-02 |
| 17 | GO:0022626: cytosolic ribosome | 1.15E-02 |
| 18 | GO:0031966: mitochondrial membrane | 1.15E-02 |
| 19 | GO:0005634: nucleus | 1.61E-02 |
| 20 | GO:0009543: chloroplast thylakoid lumen | 1.82E-02 |
| 21 | GO:0005774: vacuolar membrane | 2.19E-02 |
| 22 | GO:0005840: ribosome | 2.57E-02 |
| 23 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 3.34E-02 |
| 24 | GO:0005789: endoplasmic reticulum membrane | 3.74E-02 |
| 25 | GO:0005886: plasma membrane | 4.29E-02 |