GO Enrichment Analysis of Co-expressed Genes with
AT3G09180
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0002191: cap-dependent translational initiation | 0.00E+00 |
| 2 | GO:0009173: pyrimidine ribonucleoside monophosphate metabolic process | 0.00E+00 |
| 3 | GO:0006488: dolichol-linked oligosaccharide biosynthetic process | 0.00E+00 |
| 4 | GO:0006511: ubiquitin-dependent protein catabolic process | 1.66E-11 |
| 5 | GO:0050665: hydrogen peroxide biosynthetic process | 6.25E-06 |
| 6 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 6.25E-06 |
| 7 | GO:2000072: regulation of defense response to fungus, incompatible interaction | 1.13E-04 |
| 8 | GO:0031124: mRNA 3'-end processing | 1.13E-04 |
| 9 | GO:0030433: ubiquitin-dependent ERAD pathway | 1.50E-04 |
| 10 | GO:0010498: proteasomal protein catabolic process | 1.95E-04 |
| 11 | GO:0010255: glucose mediated signaling pathway | 2.85E-04 |
| 12 | GO:0071786: endoplasmic reticulum tubular network organization | 2.85E-04 |
| 13 | GO:0002679: respiratory burst involved in defense response | 2.85E-04 |
| 14 | GO:0030163: protein catabolic process | 3.27E-04 |
| 15 | GO:0010363: regulation of plant-type hypersensitive response | 3.84E-04 |
| 16 | GO:0006221: pyrimidine nucleotide biosynthetic process | 3.84E-04 |
| 17 | GO:0005513: detection of calcium ion | 4.88E-04 |
| 18 | GO:0001731: formation of translation preinitiation complex | 5.98E-04 |
| 19 | GO:0048827: phyllome development | 5.98E-04 |
| 20 | GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation | 5.98E-04 |
| 21 | GO:0043248: proteasome assembly | 5.98E-04 |
| 22 | GO:0009612: response to mechanical stimulus | 7.13E-04 |
| 23 | GO:0009854: oxidative photosynthetic carbon pathway | 7.13E-04 |
| 24 | GO:0009793: embryo development ending in seed dormancy | 7.48E-04 |
| 25 | GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process | 8.33E-04 |
| 26 | GO:0019375: galactolipid biosynthetic process | 9.57E-04 |
| 27 | GO:0050821: protein stabilization | 9.57E-04 |
| 28 | GO:0048766: root hair initiation | 9.57E-04 |
| 29 | GO:0009932: cell tip growth | 1.09E-03 |
| 30 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.18E-03 |
| 31 | GO:0006379: mRNA cleavage | 1.22E-03 |
| 32 | GO:0009553: embryo sac development | 1.56E-03 |
| 33 | GO:0048765: root hair cell differentiation | 1.66E-03 |
| 34 | GO:0006378: mRNA polyadenylation | 1.66E-03 |
| 35 | GO:0046856: phosphatidylinositol dephosphorylation | 1.66E-03 |
| 36 | GO:0006790: sulfur compound metabolic process | 1.81E-03 |
| 37 | GO:0006446: regulation of translational initiation | 2.14E-03 |
| 38 | GO:0046854: phosphatidylinositol phosphorylation | 2.31E-03 |
| 39 | GO:0010053: root epidermal cell differentiation | 2.31E-03 |
| 40 | GO:0006487: protein N-linked glycosylation | 2.67E-03 |
| 41 | GO:0000027: ribosomal large subunit assembly | 2.67E-03 |
| 42 | GO:0010187: negative regulation of seed germination | 2.67E-03 |
| 43 | GO:0016575: histone deacetylation | 2.85E-03 |
| 44 | GO:0010431: seed maturation | 3.04E-03 |
| 45 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 3.06E-03 |
| 46 | GO:0034220: ion transmembrane transport | 4.04E-03 |
| 47 | GO:0010154: fruit development | 4.25E-03 |
| 48 | GO:0009651: response to salt stress | 6.08E-03 |
| 49 | GO:0016579: protein deubiquitination | 6.08E-03 |
| 50 | GO:0009816: defense response to bacterium, incompatible interaction | 6.57E-03 |
| 51 | GO:0009817: defense response to fungus, incompatible interaction | 7.60E-03 |
| 52 | GO:0048767: root hair elongation | 7.87E-03 |
| 53 | GO:0010043: response to zinc ion | 8.41E-03 |
| 54 | GO:0009867: jasmonic acid mediated signaling pathway | 8.96E-03 |
| 55 | GO:0045087: innate immune response | 8.96E-03 |
| 56 | GO:0046686: response to cadmium ion | 9.34E-03 |
| 57 | GO:0006839: mitochondrial transport | 9.82E-03 |
| 58 | GO:0009846: pollen germination | 1.26E-02 |
| 59 | GO:0009555: pollen development | 1.37E-02 |
| 60 | GO:0043086: negative regulation of catalytic activity | 1.49E-02 |
| 61 | GO:0009626: plant-type hypersensitive response | 1.56E-02 |
| 62 | GO:0006413: translational initiation | 2.38E-02 |
| 63 | GO:0010228: vegetative to reproductive phase transition of meristem | 2.59E-02 |
| 64 | GO:0042742: defense response to bacterium | 2.77E-02 |
| 65 | GO:0009617: response to bacterium | 2.84E-02 |
| 66 | GO:0009409: response to cold | 3.75E-02 |
| 67 | GO:0048366: leaf development | 3.84E-02 |
| 68 | GO:0006810: transport | 4.06E-02 |
| 69 | GO:0046777: protein autophosphorylation | 4.18E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0098808: mRNA cap binding | 0.00E+00 |
| 2 | GO:0004583: dolichyl-phosphate-glucose-glycolipid alpha-glucosyltransferase activity | 0.00E+00 |
| 3 | GO:0004298: threonine-type endopeptidase activity | 1.94E-08 |
| 4 | GO:0036402: proteasome-activating ATPase activity | 6.25E-06 |
| 5 | GO:0008233: peptidase activity | 6.13E-05 |
| 6 | GO:0017025: TBP-class protein binding | 8.62E-05 |
| 7 | GO:0004190: aspartic-type endopeptidase activity | 8.62E-05 |
| 8 | GO:0051879: Hsp90 protein binding | 1.13E-04 |
| 9 | GO:0004127: cytidylate kinase activity | 1.13E-04 |
| 10 | GO:0051731: polynucleotide 5'-hydroxyl-kinase activity | 1.13E-04 |
| 11 | GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity | 1.95E-04 |
| 12 | GO:0016887: ATPase activity | 2.68E-04 |
| 13 | GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity | 2.85E-04 |
| 14 | GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | 2.85E-04 |
| 15 | GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity | 2.85E-04 |
| 16 | GO:0009041: uridylate kinase activity | 2.85E-04 |
| 17 | GO:0046527: glucosyltransferase activity | 3.84E-04 |
| 18 | GO:0008891: glycolate oxidase activity | 3.84E-04 |
| 19 | GO:0031593: polyubiquitin binding | 5.98E-04 |
| 20 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 7.13E-04 |
| 21 | GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific) | 1.09E-03 |
| 22 | GO:0008327: methyl-CpG binding | 1.66E-03 |
| 23 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 1.98E-03 |
| 24 | GO:0004407: histone deacetylase activity | 2.67E-03 |
| 25 | GO:0043130: ubiquitin binding | 2.67E-03 |
| 26 | GO:0043424: protein histidine kinase binding | 2.85E-03 |
| 27 | GO:0010181: FMN binding | 4.47E-03 |
| 28 | GO:0004843: thiol-dependent ubiquitin-specific protease activity | 4.91E-03 |
| 29 | GO:0004518: nuclease activity | 5.13E-03 |
| 30 | GO:0005524: ATP binding | 5.37E-03 |
| 31 | GO:0015250: water channel activity | 6.32E-03 |
| 32 | GO:0000166: nucleotide binding | 1.37E-02 |
| 33 | GO:0031625: ubiquitin protein ligase binding | 1.42E-02 |
| 34 | GO:0046910: pectinesterase inhibitor activity | 2.38E-02 |
| 35 | GO:0003743: translation initiation factor activity | 2.80E-02 |
| 36 | GO:0000287: magnesium ion binding | 3.37E-02 |
| 37 | GO:0061630: ubiquitin protein ligase activity | 4.13E-02 |
| 38 | GO:0004722: protein serine/threonine phosphatase activity | 4.83E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019867: outer membrane | 0.00E+00 |
| 2 | GO:0000502: proteasome complex | 9.70E-16 |
| 3 | GO:0005839: proteasome core complex | 1.94E-08 |
| 4 | GO:0031595: nuclear proteasome complex | 5.22E-08 |
| 5 | GO:0031597: cytosolic proteasome complex | 9.07E-06 |
| 6 | GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane | 1.67E-05 |
| 7 | GO:0019773: proteasome core complex, alpha-subunit complex | 2.16E-05 |
| 8 | GO:0008540: proteasome regulatory particle, base subcomplex | 3.34E-05 |
| 9 | GO:0009510: plasmodesmatal desmotubule | 4.60E-05 |
| 10 | GO:0008541: proteasome regulatory particle, lid subcomplex | 4.81E-05 |
| 11 | GO:0005829: cytosol | 7.05E-05 |
| 12 | GO:0005838: proteasome regulatory particle | 1.95E-04 |
| 13 | GO:0071782: endoplasmic reticulum tubular network | 2.85E-04 |
| 14 | GO:0005849: mRNA cleavage factor complex | 2.85E-04 |
| 15 | GO:0030660: Golgi-associated vesicle membrane | 3.84E-04 |
| 16 | GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane | 3.84E-04 |
| 17 | GO:0016282: eukaryotic 43S preinitiation complex | 5.98E-04 |
| 18 | GO:0033290: eukaryotic 48S preinitiation complex | 7.13E-04 |
| 19 | GO:0005783: endoplasmic reticulum | 1.37E-03 |
| 20 | GO:0005774: vacuolar membrane | 1.50E-03 |
| 21 | GO:0048471: perinuclear region of cytoplasm | 1.66E-03 |
| 22 | GO:0005765: lysosomal membrane | 1.66E-03 |
| 23 | GO:0031307: integral component of mitochondrial outer membrane | 1.81E-03 |
| 24 | GO:0005789: endoplasmic reticulum membrane | 1.84E-03 |
| 25 | GO:0043234: protein complex | 2.49E-03 |
| 26 | GO:0005634: nucleus | 2.84E-03 |
| 27 | GO:0005741: mitochondrial outer membrane | 3.04E-03 |
| 28 | GO:0009504: cell plate | 4.68E-03 |
| 29 | GO:0005788: endoplasmic reticulum lumen | 6.57E-03 |
| 30 | GO:0048046: apoplast | 6.86E-03 |
| 31 | GO:0019005: SCF ubiquitin ligase complex | 7.60E-03 |
| 32 | GO:0005773: vacuole | 1.22E-02 |
| 33 | GO:0031966: mitochondrial membrane | 1.26E-02 |
| 34 | GO:0022626: cytosolic ribosome | 1.31E-02 |
| 35 | GO:0005747: mitochondrial respiratory chain complex I | 1.52E-02 |
| 36 | GO:0005737: cytoplasm | 1.65E-02 |
| 37 | GO:0005618: cell wall | 3.04E-02 |
| 38 | GO:0009536: plastid | 3.40E-02 |
| 39 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 3.65E-02 |
| 40 | GO:0009506: plasmodesma | 4.67E-02 |
| 41 | GO:0005730: nucleolus | 4.67E-02 |
| 42 | GO:0005743: mitochondrial inner membrane | 4.98E-02 |