co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G08870

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0005993: trehalose catabolic process	0.00E+00
2	GO:0090400: stress-induced premature senescence	0.00E+00
3	GO:0080149: sucrose induced translational repression	0.00E+00
4	GO:0097250: mitochondrial respiratory chain supercomplex assembly	0.00E+00
5	GO:0010407: non-classical arabinogalactan protein metabolic process	0.00E+00
6	GO:0010499: proteasomal ubiquitin-independent protein catabolic process	0.00E+00
7	GO:1904250: positive regulation of age-related resistance	0.00E+00
8	GO:0016192: vesicle-mediated transport	5.67E-07
9	GO:0010421: hydrogen peroxide-mediated programmed cell death	1.30E-04
10	GO:0019478: D-amino acid catabolic process	1.30E-04
11	GO:1900384: regulation of flavonol biosynthetic process	1.30E-04
12	GO:0055046: microgametogenesis	2.89E-04
13	GO:0015709: thiosulfate transport	2.99E-04
14	GO:0071422: succinate transmembrane transport	2.99E-04
15	GO:0009805: coumarin biosynthetic process	2.99E-04
16	GO:0042853: L-alanine catabolic process	2.99E-04
17	GO:0080026: response to indolebutyric acid	2.99E-04
18	GO:0000162: tryptophan biosynthetic process	4.10E-04
19	GO:0009636: response to toxic substance	4.21E-04
20	GO:0051091: positive regulation of sequence-specific DNA binding transcription factor activity	4.92E-04
21	GO:0009062: fatty acid catabolic process	4.92E-04
22	GO:0010253: UDP-rhamnose biosynthetic process	4.92E-04
23	GO:0007275: multicellular organism development	4.93E-04
24	GO:0015729: oxaloacetate transport	7.04E-04
25	GO:0080024: indolebutyric acid metabolic process	7.04E-04
26	GO:0015031: protein transport	7.70E-04
27	GO:1902584: positive regulation of response to water deprivation	9.34E-04
28	GO:0006621: protein retention in ER lumen	9.34E-04
29	GO:0006623: protein targeting to vacuole	1.02E-03
30	GO:0045927: positive regulation of growth	1.18E-03
31	GO:0071423: malate transmembrane transport	1.18E-03
32	GO:0006564: L-serine biosynthetic process	1.18E-03
33	GO:0097428: protein maturation by iron-sulfur cluster transfer	1.18E-03
34	GO:0006555: methionine metabolic process	1.45E-03
35	GO:0010315: auxin efflux	1.45E-03
36	GO:0035435: phosphate ion transmembrane transport	1.45E-03
37	GO:0080113: regulation of seed growth	1.73E-03
38	GO:0019509: L-methionine salvage from methylthioadenosine	1.73E-03
39	GO:0034389: lipid particle organization	1.73E-03
40	GO:0017148: negative regulation of translation	1.73E-03
41	GO:1902074: response to salt	2.04E-03
42	GO:0006744: ubiquinone biosynthetic process	2.04E-03
43	GO:0080186: developmental vegetative growth	2.04E-03
44	GO:0008272: sulfate transport	2.04E-03
45	GO:1900057: positive regulation of leaf senescence	2.04E-03
46	GO:0007155: cell adhesion	2.36E-03
47	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	2.36E-03
48	GO:0043068: positive regulation of programmed cell death	2.36E-03
49	GO:0009699: phenylpropanoid biosynthetic process	2.69E-03
50	GO:0006002: fructose 6-phosphate metabolic process	2.69E-03
51	GO:0015996: chlorophyll catabolic process	2.69E-03
52	GO:0009835: fruit ripening	3.04E-03
53	GO:0055114: oxidation-reduction process	3.36E-03
54	GO:0051555: flavonol biosynthetic process	3.79E-03
55	GO:0000103: sulfate assimilation	3.79E-03
56	GO:0051603: proteolysis involved in cellular protein catabolic process	4.53E-03
57	GO:0045454: cell redox homeostasis	4.66E-03
58	GO:0006886: intracellular protein transport	4.84E-03
59	GO:0007033: vacuole organization	5.88E-03
60	GO:0010053: root epidermal cell differentiation	5.88E-03
61	GO:0009225: nucleotide-sugar metabolic process	5.88E-03
62	GO:0007030: Golgi organization	5.88E-03
63	GO:0009825: multidimensional cell growth	5.88E-03
64	GO:0009751: response to salicylic acid	5.97E-03
65	GO:0034976: response to endoplasmic reticulum stress	6.34E-03
66	GO:0006338: chromatin remodeling	6.81E-03
67	GO:0008299: isoprenoid biosynthetic process	7.30E-03
68	GO:0019915: lipid storage	7.79E-03
69	GO:0019748: secondary metabolic process	8.30E-03
70	GO:0010584: pollen exine formation	9.35E-03
71	GO:0009561: megagametogenesis	9.35E-03
72	GO:0042127: regulation of cell proliferation	9.35E-03
73	GO:0009306: protein secretion	9.35E-03
74	GO:0010150: leaf senescence	1.08E-02
75	GO:0006662: glycerol ether metabolic process	1.10E-02
76	GO:0006635: fatty acid beta-oxidation	1.28E-02
77	GO:0016032: viral process	1.34E-02
78	GO:0019760: glucosinolate metabolic process	1.46E-02
79	GO:0001666: response to hypoxia	1.66E-02
80	GO:0010029: regulation of seed germination	1.73E-02
81	GO:0006906: vesicle fusion	1.79E-02
82	GO:0048767: root hair elongation	2.07E-02
83	GO:0006499: N-terminal protein myristoylation	2.15E-02
84	GO:0009407: toxin catabolic process	2.15E-02
85	GO:0010043: response to zinc ion	2.22E-02
86	GO:0048527: lateral root development	2.22E-02
87	GO:0045087: innate immune response	2.37E-02
88	GO:0016051: carbohydrate biosynthetic process	2.37E-02
89	GO:0034599: cellular response to oxidative stress	2.45E-02
90	GO:0006839: mitochondrial transport	2.60E-02
91	GO:0006887: exocytosis	2.68E-02
92	GO:0042542: response to hydrogen peroxide	2.76E-02
93	GO:0009744: response to sucrose	2.84E-02
94	GO:0051707: response to other organism	2.84E-02
95	GO:0000209: protein polyubiquitination	2.92E-02
96	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	3.25E-02
97	GO:0009809: lignin biosynthetic process	3.51E-02
98	GO:0006486: protein glycosylation	3.51E-02
99	GO:0006096: glycolytic process	3.95E-02
100	GO:0016569: covalent chromatin modification	4.32E-02
101	GO:0051726: regulation of cell cycle	4.70E-02
102	GO:0009651: response to salt stress	4.80E-02
103	GO:0006810: transport	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0051499: D-aminoacyl-tRNA deacylase activity	0.00E+00
2	GO:0016504: peptidase activator activity	0.00E+00
3	GO:0070577: lysine-acetylated histone binding	0.00E+00
4	GO:0004555: alpha,alpha-trehalase activity	0.00E+00
5	GO:0052684: L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity	0.00E+00
6	GO:0005046: KDEL sequence binding	0.00E+00
7	GO:0061133: endopeptidase activator activity	0.00E+00
8	GO:0008320: protein transmembrane transporter activity	6.36E-07
9	GO:0070628: proteasome binding	1.40E-05
10	GO:0016229: steroid dehydrogenase activity	1.30E-04
11	GO:0004425: indole-3-glycerol-phosphate synthase activity	1.30E-04
12	GO:0015927: trehalase activity	1.30E-04
13	GO:0070401: NADP+ binding	1.30E-04
14	GO:0102293: pheophytinase b activity	1.30E-04
15	GO:0047746: chlorophyllase activity	2.99E-04
16	GO:0010297: heteropolysaccharide binding	2.99E-04
17	GO:0008460: dTDP-glucose 4,6-dehydratase activity	2.99E-04
18	GO:0004617: phosphoglycerate dehydrogenase activity	2.99E-04
19	GO:0010280: UDP-L-rhamnose synthase activity	2.99E-04
20	GO:0050347: trans-octaprenyltranstransferase activity	2.99E-04
21	GO:0052924: all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity	2.99E-04
22	GO:0008805: carbon-monoxide oxygenase activity	2.99E-04
23	GO:0050377: UDP-glucose 4,6-dehydratase activity	2.99E-04
24	GO:0015117: thiosulfate transmembrane transporter activity	2.99E-04
25	GO:0048531: beta-1,3-galactosyltransferase activity	2.99E-04
26	GO:1990585: hydroxyproline O-arabinosyltransferase activity	2.99E-04
27	GO:1901677: phosphate transmembrane transporter activity	2.99E-04
28	GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity	4.92E-04
29	GO:0005310: dicarboxylic acid transmembrane transporter activity	4.92E-04
30	GO:0015141: succinate transmembrane transporter activity	4.92E-04
31	GO:0004165: dodecenoyl-CoA delta-isomerase activity	7.04E-04
32	GO:0017077: oxidative phosphorylation uncoupler activity	7.04E-04
33	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	7.04E-04
34	GO:0015131: oxaloacetate transmembrane transporter activity	7.04E-04
35	GO:0016656: monodehydroascorbate reductase (NADH) activity	7.04E-04
36	GO:0004659: prenyltransferase activity	9.34E-04
37	GO:0004834: tryptophan synthase activity	9.34E-04
38	GO:0046923: ER retention sequence binding	9.34E-04
39	GO:0004040: amidase activity	1.18E-03
40	GO:0003950: NAD+ ADP-ribosyltransferase activity	1.73E-03
41	GO:0004656: procollagen-proline 4-dioxygenase activity	1.73E-03
42	GO:0003872: 6-phosphofructokinase activity	2.04E-03
43	GO:0015140: malate transmembrane transporter activity	2.04E-03
44	GO:0004033: aldo-keto reductase (NADP) activity	2.36E-03
45	GO:0052747: sinapyl alcohol dehydrogenase activity	2.36E-03
46	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.54E-03
47	GO:0008138: protein tyrosine/serine/threonine phosphatase activity	3.04E-03
48	GO:0004161: dimethylallyltranstransferase activity	4.18E-03
49	GO:0045551: cinnamyl-alcohol dehydrogenase activity	4.58E-03
50	GO:0015116: sulfate transmembrane transporter activity	4.58E-03
51	GO:0008378: galactosyltransferase activity	4.58E-03
52	GO:0031072: heat shock protein binding	5.00E-03
53	GO:0004175: endopeptidase activity	5.44E-03
54	GO:0004867: serine-type endopeptidase inhibitor activity	5.88E-03
55	GO:0004725: protein tyrosine phosphatase activity	6.34E-03
56	GO:0015035: protein disulfide oxidoreductase activity	6.40E-03
57	GO:0051536: iron-sulfur cluster binding	6.81E-03
58	GO:0031418: L-ascorbic acid binding	6.81E-03
59	GO:0043130: ubiquitin binding	6.81E-03
60	GO:0008408: 3'-5' exonuclease activity	7.79E-03
61	GO:0004298: threonine-type endopeptidase activity	7.79E-03
62	GO:0030170: pyridoxal phosphate binding	8.64E-03
63	GO:0003756: protein disulfide isomerase activity	9.35E-03
64	GO:0047134: protein-disulfide reductase activity	9.90E-03
65	GO:0005102: receptor binding	9.90E-03
66	GO:0004402: histone acetyltransferase activity	1.04E-02
67	GO:0004527: exonuclease activity	1.10E-02
68	GO:0004791: thioredoxin-disulfide reductase activity	1.16E-02
69	GO:0016853: isomerase activity	1.16E-02
70	GO:0004872: receptor activity	1.22E-02
71	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.40E-02
72	GO:0016597: amino acid binding	1.59E-02
73	GO:0051213: dioxygenase activity	1.66E-02
74	GO:0008375: acetylglucosaminyltransferase activity	1.79E-02
75	GO:0050660: flavin adenine dinucleotide binding	1.93E-02
76	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	2.00E-02
77	GO:0061630: ubiquitin protein ligase activity	2.18E-02
78	GO:0003746: translation elongation factor activity	2.37E-02
79	GO:0000149: SNARE binding	2.52E-02
80	GO:0042803: protein homodimerization activity	2.60E-02
81	GO:0004364: glutathione transferase activity	2.76E-02
82	GO:0005484: SNAP receptor activity	2.84E-02
83	GO:0044212: transcription regulatory region DNA binding	3.06E-02
84	GO:0005198: structural molecule activity	3.08E-02
85	GO:0051287: NAD binding	3.25E-02
86	GO:0009055: electron carrier activity	3.28E-02
87	GO:0031625: ubiquitin protein ligase binding	3.77E-02
88	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	4.04E-02
89	GO:0022857: transmembrane transporter activity	4.32E-02
90	GO:0051082: unfolded protein binding	4.51E-02
91	GO:0016887: ATPase activity	4.72E-02

Rank	GO Term	Adjusted P value
1	GO:0005801: cis-Golgi network	4.86E-05
2	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	6.54E-05
3	GO:0031901: early endosome membrane	1.31E-04
4	GO:0030134: ER to Golgi transport vesicle	2.99E-04
5	GO:0005839: proteasome core complex	5.50E-04
6	GO:0016592: mediator complex	1.15E-03
7	GO:0005945: 6-phosphofructokinase complex	1.18E-03
8	GO:0032580: Golgi cisterna membrane	1.30E-03
9	GO:0005788: endoplasmic reticulum lumen	1.63E-03
10	GO:0030173: integral component of Golgi membrane	1.73E-03
11	GO:0031982: vesicle	2.36E-03
12	GO:0005811: lipid particle	2.69E-03
13	GO:0030665: clathrin-coated vesicle membrane	3.41E-03
14	GO:0017119: Golgi transport complex	3.79E-03
15	GO:0005789: endoplasmic reticulum membrane	4.17E-03
16	GO:0008541: proteasome regulatory particle, lid subcomplex	4.18E-03
17	GO:0005794: Golgi apparatus	4.18E-03
18	GO:0005768: endosome	6.82E-03
19	GO:0005744: mitochondrial inner membrane presequence translocase complex	9.35E-03
20	GO:0005737: cytoplasm	1.05E-02
21	GO:0005615: extracellular space	1.20E-02
22	GO:0016021: integral component of membrane	1.37E-02
23	GO:0005783: endoplasmic reticulum	2.14E-02
24	GO:0005802: trans-Golgi network	2.29E-02
25	GO:0005829: cytosol	2.32E-02
26	GO:0031201: SNARE complex	2.68E-02
27	GO:0031902: late endosome membrane	2.68E-02
28	GO:0000502: proteasome complex	3.51E-02