co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G08690

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006983: ER overload response	0.00E+00
2	GO:1902009: positive regulation of toxin transport	0.00E+00
3	GO:0051553: flavone biosynthetic process	0.00E+00
4	GO:2000068: regulation of defense response to insect	0.00E+00
5	GO:0006654: phosphatidic acid biosynthetic process	0.00E+00
6	GO:1902289: negative regulation of defense response to oomycetes	0.00E+00
7	GO:0098755: maintenance of seed dormancy by absisic acid	0.00E+00
8	GO:0005993: trehalose catabolic process	0.00E+00
9	GO:2000378: negative regulation of reactive oxygen species metabolic process	0.00E+00
10	GO:0043619: regulation of transcription from RNA polymerase II promoter in response to oxidative stress	0.00E+00
11	GO:0010401: pectic galactan metabolic process	0.00E+00
12	GO:0030150: protein import into mitochondrial matrix	1.29E-05
13	GO:0016337: single organismal cell-cell adhesion	1.14E-04
14	GO:1990641: response to iron ion starvation	1.14E-04
15	GO:0043182: vacuolar sequestering of sodium ion	1.14E-04
16	GO:0046246: terpene biosynthetic process	1.14E-04
17	GO:0051090: regulation of sequence-specific DNA binding transcription factor activity	1.14E-04
18	GO:0008202: steroid metabolic process	1.31E-04
19	GO:0008535: respiratory chain complex IV assembly	2.65E-04
20	GO:0015012: heparan sulfate proteoglycan biosynthetic process	2.65E-04
21	GO:0010155: regulation of proton transport	2.65E-04
22	GO:0006568: tryptophan metabolic process	2.65E-04
23	GO:0006024: glycosaminoglycan biosynthetic process	2.65E-04
24	GO:0052541: plant-type cell wall cellulose metabolic process	2.65E-04
25	GO:0006101: citrate metabolic process	2.65E-04
26	GO:0043066: negative regulation of apoptotic process	2.65E-04
27	GO:0007275: multicellular organism development	3.26E-04
28	GO:0009410: response to xenobiotic stimulus	4.38E-04
29	GO:0080163: regulation of protein serine/threonine phosphatase activity	4.38E-04
30	GO:0016192: vesicle-mediated transport	5.30E-04
31	GO:0071323: cellular response to chitin	6.29E-04
32	GO:0071786: endoplasmic reticulum tubular network organization	6.29E-04
33	GO:0080024: indolebutyric acid metabolic process	6.29E-04
34	GO:0055070: copper ion homeostasis	6.29E-04
35	GO:0001676: long-chain fatty acid metabolic process	6.29E-04
36	GO:0033617: mitochondrial respiratory chain complex IV assembly	6.29E-04
37	GO:0002239: response to oomycetes	6.29E-04
38	GO:0009963: positive regulation of flavonoid biosynthetic process	6.29E-04
39	GO:0006621: protein retention in ER lumen	8.35E-04
40	GO:0015867: ATP transport	8.35E-04
41	GO:1901002: positive regulation of response to salt stress	8.35E-04
42	GO:0006097: glyoxylate cycle	1.05E-03
43	GO:0009229: thiamine diphosphate biosynthetic process	1.05E-03
44	GO:0006665: sphingolipid metabolic process	1.05E-03
45	GO:0009759: indole glucosinolate biosynthetic process	1.29E-03
46	GO:0015866: ADP transport	1.29E-03
47	GO:0009228: thiamine biosynthetic process	1.29E-03
48	GO:0047484: regulation of response to osmotic stress	1.29E-03
49	GO:1900425: negative regulation of defense response to bacterium	1.29E-03
50	GO:0030643: cellular phosphate ion homeostasis	1.54E-03
51	GO:0010044: response to aluminum ion	1.81E-03
52	GO:0009738: abscisic acid-activated signaling pathway	1.99E-03
53	GO:0006605: protein targeting	2.09E-03
54	GO:0006102: isocitrate metabolic process	2.09E-03
55	GO:0016559: peroxisome fission	2.09E-03
56	GO:0006367: transcription initiation from RNA polymerase II promoter	2.39E-03
57	GO:0006631: fatty acid metabolic process	2.52E-03
58	GO:0007338: single fertilization	2.70E-03
59	GO:0051707: response to other organism	2.74E-03
60	GO:0009086: methionine biosynthetic process	3.02E-03
61	GO:0044550: secondary metabolite biosynthetic process	3.29E-03
62	GO:0043069: negative regulation of programmed cell death	3.36E-03
63	GO:0010215: cellulose microfibril organization	3.36E-03
64	GO:0051555: flavonol biosynthetic process	3.36E-03
65	GO:0000038: very long-chain fatty acid metabolic process	3.71E-03
66	GO:0019684: photosynthesis, light reaction	3.71E-03
67	GO:0010224: response to UV-B	3.80E-03
68	GO:0006886: intracellular protein transport	3.87E-03
69	GO:0000266: mitochondrial fission	4.06E-03
70	GO:0045037: protein import into chloroplast stroma	4.06E-03
71	GO:2000012: regulation of auxin polar transport	4.43E-03
72	GO:0010102: lateral root morphogenesis	4.43E-03
73	GO:0002237: response to molecule of bacterial origin	4.81E-03
74	GO:0090351: seedling development	5.21E-03
75	GO:0000162: tryptophan biosynthetic process	5.61E-03
76	GO:0000027: ribosomal large subunit assembly	6.03E-03
77	GO:0009863: salicylic acid mediated signaling pathway	6.03E-03
78	GO:0016114: terpenoid biosynthetic process	6.89E-03
79	GO:0009269: response to desiccation	6.89E-03
80	GO:0031348: negative regulation of defense response	7.34E-03
81	GO:0009814: defense response, incompatible interaction	7.34E-03
82	GO:0009411: response to UV	7.79E-03
83	GO:0006413: translational initiation	8.39E-03
84	GO:0015031: protein transport	8.79E-03
85	GO:0010087: phloem or xylem histogenesis	9.23E-03
86	GO:0007166: cell surface receptor signaling pathway	1.03E-02
87	GO:0006470: protein dephosphorylation	1.03E-02
88	GO:0006635: fatty acid beta-oxidation	1.13E-02
89	GO:0071554: cell wall organization or biogenesis	1.13E-02
90	GO:0002229: defense response to oomycetes	1.13E-02
91	GO:0010193: response to ozone	1.13E-02
92	GO:0032502: developmental process	1.18E-02
93	GO:0016032: viral process	1.18E-02
94	GO:0009567: double fertilization forming a zygote and endosperm	1.29E-02
95	GO:0006464: cellular protein modification process	1.29E-02
96	GO:0010029: regulation of seed germination	1.52E-02
97	GO:0009816: defense response to bacterium, incompatible interaction	1.52E-02
98	GO:0016311: dephosphorylation	1.70E-02
99	GO:0016049: cell growth	1.70E-02
100	GO:0008219: cell death	1.77E-02
101	GO:0048767: root hair elongation	1.83E-02
102	GO:0009813: flavonoid biosynthetic process	1.83E-02
103	GO:0009867: jasmonic acid mediated signaling pathway	2.09E-02
104	GO:0045087: innate immune response	2.09E-02
105	GO:0006099: tricarboxylic acid cycle	2.16E-02
106	GO:0006869: lipid transport	2.28E-02
107	GO:0006839: mitochondrial transport	2.29E-02
108	GO:0042542: response to hydrogen peroxide	2.43E-02
109	GO:0042742: defense response to bacterium	2.45E-02
110	GO:0010114: response to red light	2.50E-02
111	GO:0009408: response to heat	2.56E-02
112	GO:0048364: root development	2.67E-02
113	GO:0009809: lignin biosynthetic process	3.09E-02
114	GO:0006486: protein glycosylation	3.09E-02
115	GO:0009620: response to fungus	3.73E-02
116	GO:0006810: transport	3.95E-02
117	GO:0009845: seed germination	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0005046: KDEL sequence binding	0.00E+00
2	GO:0097008: (3E)-4,8-dimethyl-1,3,7-nonatriene synthase activity	0.00E+00
3	GO:0034338: short-chain carboxylesterase activity	0.00E+00
4	GO:0033759: flavone synthase activity	0.00E+00
5	GO:0097007: 4,8,12-trimethyltrideca-1,3,7,11-tetraene synthase activity	0.00E+00
6	GO:0055105: ubiquitin-protein transferase inhibitor activity	0.00E+00
7	GO:0004555: alpha,alpha-trehalase activity	0.00E+00
8	GO:0052684: L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity	0.00E+00
9	GO:0050334: thiaminase activity	0.00E+00
10	GO:0008142: oxysterol binding	8.78E-05
11	GO:0047150: betaine-homocysteine S-methyltransferase activity	1.14E-04
12	GO:0016920: pyroglutamyl-peptidase activity	1.14E-04
13	GO:0015927: trehalase activity	1.14E-04
14	GO:0015036: disulfide oxidoreductase activity	2.65E-04
15	GO:0003994: aconitate hydratase activity	2.65E-04
16	GO:0000774: adenyl-nucleotide exchange factor activity	2.65E-04
17	GO:0032934: sterol binding	2.65E-04
18	GO:0035251: UDP-glucosyltransferase activity	4.64E-04
19	GO:0004834: tryptophan synthase activity	8.35E-04
20	GO:0046923: ER retention sequence binding	8.35E-04
21	GO:0004623: phospholipase A2 activity	1.05E-03
22	GO:0005347: ATP transmembrane transporter activity	1.54E-03
23	GO:0015217: ADP transmembrane transporter activity	1.54E-03
24	GO:0102391: decanoate--CoA ligase activity	1.54E-03
25	GO:0008320: protein transmembrane transporter activity	1.81E-03
26	GO:0004467: long-chain fatty acid-CoA ligase activity	1.81E-03
27	GO:0047893: flavonol 3-O-glucosyltransferase activity	2.09E-03
28	GO:0052747: sinapyl alcohol dehydrogenase activity	2.09E-03
29	GO:0004630: phospholipase D activity	2.39E-03
30	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	2.39E-03
31	GO:0004864: protein phosphatase inhibitor activity	3.36E-03
32	GO:0042803: protein homodimerization activity	3.95E-03
33	GO:0045551: cinnamyl-alcohol dehydrogenase activity	4.06E-03
34	GO:0004722: protein serine/threonine phosphatase activity	4.18E-03
35	GO:0031072: heat shock protein binding	4.43E-03
36	GO:0015266: protein channel activity	4.43E-03
37	GO:0051082: unfolded protein binding	5.21E-03
38	GO:0008061: chitin binding	5.21E-03
39	GO:0003712: transcription cofactor activity	5.21E-03
40	GO:0051087: chaperone binding	6.45E-03
41	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	8.39E-03
42	GO:0005102: receptor binding	8.74E-03
43	GO:0003743: translation initiation factor activity	1.05E-02
44	GO:0004872: receptor activity	1.08E-02
45	GO:0016791: phosphatase activity	1.29E-02
46	GO:0016413: O-acetyltransferase activity	1.40E-02
47	GO:0005507: copper ion binding	1.57E-02
48	GO:0019825: oxygen binding	1.57E-02
49	GO:0004806: triglyceride lipase activity	1.64E-02
50	GO:0030247: polysaccharide binding	1.64E-02
51	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.77E-02
52	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.09E-02
53	GO:0003993: acid phosphatase activity	2.16E-02
54	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	2.25E-02
55	GO:0051539: 4 iron, 4 sulfur cluster binding	2.29E-02
56	GO:0005506: iron ion binding	2.41E-02
57	GO:0035091: phosphatidylinositol binding	2.65E-02
58	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.73E-02
59	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.73E-02
60	GO:0016874: ligase activity	3.81E-02
61	GO:0020037: heme binding	4.31E-02
62	GO:0005515: protein binding	4.38E-02
63	GO:0016758: transferase activity, transferring hexosyl groups	4.58E-02
64	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	4.75E-02
65	GO:0016829: lyase activity	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0005674: transcription factor TFIIF complex	0.00E+00
2	GO:0005743: mitochondrial inner membrane	1.16E-05
3	GO:0005801: cis-Golgi network	3.95E-05
4	GO:0001405: presequence translocase-associated import motor	1.14E-04
5	GO:0005789: endoplasmic reticulum membrane	1.76E-04
6	GO:0031314: extrinsic component of mitochondrial inner membrane	2.65E-04
7	GO:0030134: ER to Golgi transport vesicle	2.65E-04
8	GO:0016021: integral component of membrane	4.51E-04
9	GO:0005783: endoplasmic reticulum	5.80E-04
10	GO:0005744: mitochondrial inner membrane presequence translocase complex	5.99E-04
11	GO:0071782: endoplasmic reticulum tubular network	6.29E-04
12	GO:0000164: protein phosphatase type 1 complex	1.05E-03
13	GO:0009986: cell surface	1.81E-03
14	GO:0031305: integral component of mitochondrial inner membrane	2.09E-03
15	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	2.09E-03
16	GO:0005779: integral component of peroxisomal membrane	2.39E-03
17	GO:0005777: peroxisome	2.58E-03
18	GO:0005623: cell	6.70E-03
19	GO:0005741: mitochondrial outer membrane	6.89E-03
20	GO:0031410: cytoplasmic vesicle	7.34E-03
21	GO:0005774: vacuolar membrane	1.27E-02
22	GO:0005778: peroxisomal membrane	1.35E-02
23	GO:0000151: ubiquitin ligase complex	1.77E-02
24	GO:0022625: cytosolic large ribosomal subunit	1.83E-02
25	GO:0000325: plant-type vacuole	1.96E-02
26	GO:0005635: nuclear envelope	3.25E-02
27	GO:0005794: Golgi apparatus	3.80E-02
28	GO:0009706: chloroplast inner membrane	3.98E-02
29	GO:0009543: chloroplast thylakoid lumen	4.67E-02
30	GO:0009506: plasmodesma	4.96E-02