Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G07580

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:2001253: regulation of histone H3-K36 trimethylation0.00E+00
2GO:0046865: terpenoid transport0.00E+00
3GO:0018063: cytochrome c-heme linkage0.00E+00
4GO:0010793: regulation of mRNA export from nucleus0.00E+00
5GO:0051553: flavone biosynthetic process0.00E+00
6GO:0010055: atrichoblast differentiation0.00E+00
7GO:1902001: fatty acid transmembrane transport0.00E+00
8GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
9GO:0010112: regulation of systemic acquired resistance2.79E-07
10GO:0042742: defense response to bacterium6.00E-06
11GO:0009759: indole glucosinolate biosynthetic process1.48E-04
12GO:0071456: cellular response to hypoxia1.89E-04
13GO:1900057: positive regulation of leaf senescence2.64E-04
14GO:0042391: regulation of membrane potential2.99E-04
15GO:0009636: response to toxic substance3.18E-04
16GO:0009700: indole phytoalexin biosynthetic process3.19E-04
17GO:0010230: alternative respiration3.19E-04
18GO:0010482: regulation of epidermal cell division3.19E-04
19GO:0050691: regulation of defense response to virus by host3.19E-04
20GO:1900384: regulation of flavonol biosynthetic process3.19E-04
21GO:1990542: mitochondrial transmembrane transport3.19E-04
22GO:0032107: regulation of response to nutrient levels3.19E-04
23GO:1990641: response to iron ion starvation3.19E-04
24GO:0033306: phytol metabolic process3.19E-04
25GO:0010120: camalexin biosynthetic process4.07E-04
26GO:0009617: response to bacterium4.45E-04
27GO:0009751: response to salicylic acid4.80E-04
28GO:0006979: response to oxidative stress6.13E-04
29GO:0051607: defense response to virus6.53E-04
30GO:0015908: fatty acid transport6.97E-04
31GO:0044419: interspecies interaction between organisms6.97E-04
32GO:0051258: protein polymerization6.97E-04
33GO:0000719: photoreactive repair6.97E-04
34GO:0006101: citrate metabolic process6.97E-04
35GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine6.97E-04
36GO:0019725: cellular homeostasis6.97E-04
37GO:0051252: regulation of RNA metabolic process6.97E-04
38GO:0071668: plant-type cell wall assembly6.97E-04
39GO:0080151: positive regulation of salicylic acid mediated signaling pathway6.97E-04
40GO:0080181: lateral root branching6.97E-04
41GO:0055088: lipid homeostasis6.97E-04
42GO:0050684: regulation of mRNA processing6.97E-04
43GO:0018315: molybdenum incorporation into molybdenum-molybdopterin complex6.97E-04
44GO:0010200: response to chitin1.09E-03
45GO:0009407: toxin catabolic process1.10E-03
46GO:0050832: defense response to fungus1.12E-03
47GO:0080168: abscisic acid transport1.13E-03
48GO:0002230: positive regulation of defense response to virus by host1.13E-03
49GO:0043328: protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway1.13E-03
50GO:0080163: regulation of protein serine/threonine phosphatase activity1.13E-03
51GO:0006048: UDP-N-acetylglucosamine biosynthetic process1.13E-03
52GO:0032784: regulation of DNA-templated transcription, elongation1.13E-03
53GO:0010186: positive regulation of cellular defense response1.13E-03
54GO:0006065: UDP-glucuronate biosynthetic process1.13E-03
55GO:0010366: negative regulation of ethylene biosynthetic process1.13E-03
56GO:0015692: lead ion transport1.13E-03
57GO:0052546: cell wall pectin metabolic process1.13E-03
58GO:0015695: organic cation transport1.13E-03
59GO:0080147: root hair cell development1.56E-03
60GO:0015696: ammonium transport1.62E-03
61GO:0071323: cellular response to chitin1.62E-03
62GO:0051289: protein homotetramerization1.62E-03
63GO:1902290: positive regulation of defense response to oomycetes1.62E-03
64GO:0001676: long-chain fatty acid metabolic process1.62E-03
65GO:0010116: positive regulation of abscisic acid biosynthetic process1.62E-03
66GO:0006020: inositol metabolic process1.62E-03
67GO:0070301: cellular response to hydrogen peroxide1.62E-03
68GO:0002239: response to oomycetes1.62E-03
69GO:0010150: leaf senescence1.67E-03
70GO:0006874: cellular calcium ion homeostasis1.72E-03
71GO:0051707: response to other organism1.81E-03
72GO:0007166: cell surface receptor signaling pathway2.05E-03
73GO:0051567: histone H3-K9 methylation2.18E-03
74GO:1901002: positive regulation of response to salt stress2.18E-03
75GO:0060548: negative regulation of cell death2.18E-03
76GO:0048830: adventitious root development2.18E-03
77GO:0072488: ammonium transmembrane transport2.18E-03
78GO:0006012: galactose metabolic process2.25E-03
79GO:0034052: positive regulation of plant-type hypersensitive response2.78E-03
80GO:0046283: anthocyanin-containing compound metabolic process2.78E-03
81GO:0031365: N-terminal protein amino acid modification2.78E-03
82GO:0006097: glyoxylate cycle2.78E-03
83GO:0009229: thiamine diphosphate biosynthetic process2.78E-03
84GO:0015031: protein transport3.31E-03
85GO:0009228: thiamine biosynthetic process3.43E-03
86GO:0009643: photosynthetic acclimation3.43E-03
87GO:0006777: Mo-molybdopterin cofactor biosynthetic process3.43E-03
88GO:0010256: endomembrane system organization3.43E-03
89GO:0006623: protein targeting to vacuole3.56E-03
90GO:0002229: defense response to oomycetes3.81E-03
91GO:0010193: response to ozone3.81E-03
92GO:0042372: phylloquinone biosynthetic process4.13E-03
93GO:0000122: negative regulation of transcription from RNA polymerase II promoter4.87E-03
94GO:1902074: response to salt4.87E-03
95GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway4.87E-03
96GO:1900056: negative regulation of leaf senescence4.87E-03
97GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline5.66E-03
98GO:0009819: drought recovery5.66E-03
99GO:0030091: protein repair5.66E-03
100GO:0009850: auxin metabolic process5.66E-03
101GO:0043068: positive regulation of programmed cell death5.66E-03
102GO:0006605: protein targeting5.66E-03
103GO:0006102: isocitrate metabolic process5.66E-03
104GO:0009627: systemic acquired resistance6.15E-03
105GO:0006997: nucleus organization6.49E-03
106GO:0010204: defense response signaling pathway, resistance gene-independent6.49E-03
107GO:0017004: cytochrome complex assembly6.49E-03
108GO:0010208: pollen wall assembly6.49E-03
109GO:0019432: triglyceride biosynthetic process7.36E-03
110GO:0007338: single fertilization7.36E-03
111GO:0010311: lateral root formation7.55E-03
112GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway8.27E-03
113GO:0008202: steroid metabolic process8.27E-03
114GO:1900426: positive regulation of defense response to bacterium8.27E-03
115GO:0090332: stomatal closure8.27E-03
116GO:0009870: defense response signaling pathway, resistance gene-dependent9.22E-03
117GO:0006032: chitin catabolic process9.22E-03
118GO:0009688: abscisic acid biosynthetic process9.22E-03
119GO:0009641: shade avoidance9.22E-03
120GO:0006099: tricarboxylic acid cycle9.54E-03
121GO:0009682: induced systemic resistance1.02E-02
122GO:0052544: defense response by callose deposition in cell wall1.02E-02
123GO:0019684: photosynthesis, light reaction1.02E-02
124GO:0048765: root hair cell differentiation1.02E-02
125GO:0009684: indoleacetic acid biosynthetic process1.02E-02
126GO:0006631: fatty acid metabolic process1.09E-02
127GO:0045037: protein import into chloroplast stroma1.12E-02
128GO:0010102: lateral root morphogenesis1.23E-02
129GO:0030048: actin filament-based movement1.23E-02
130GO:0002237: response to molecule of bacterial origin1.34E-02
131GO:0006855: drug transmembrane transport1.38E-02
132GO:0031347: regulation of defense response1.43E-02
133GO:0009225: nucleotide-sugar metabolic process1.45E-02
134GO:0006952: defense response1.46E-02
135GO:0000162: tryptophan biosynthetic process1.57E-02
136GO:0006970: response to osmotic stress1.60E-02
137GO:2000377: regulation of reactive oxygen species metabolic process1.69E-02
138GO:0010026: trichome differentiation1.81E-02
139GO:0043622: cortical microtubule organization1.81E-02
140GO:0051302: regulation of cell division1.81E-02
141GO:0016998: cell wall macromolecule catabolic process1.94E-02
142GO:0009269: response to desiccation1.94E-02
143GO:0009626: plant-type hypersensitive response2.01E-02
144GO:0016226: iron-sulfur cluster assembly2.07E-02
145GO:0009620: response to fungus2.07E-02
146GO:0009411: response to UV2.20E-02
147GO:0009625: response to insect2.20E-02
148GO:0000413: protein peptidyl-prolyl isomerization2.61E-02
149GO:0010118: stomatal movement2.61E-02
150GO:0009737: response to abscisic acid2.66E-02
151GO:0006869: lipid transport2.69E-02
152GO:0006520: cellular amino acid metabolic process2.75E-02
153GO:0010182: sugar mediated signaling pathway2.75E-02
154GO:0048868: pollen tube development2.75E-02
155GO:0006629: lipid metabolic process3.11E-02
156GO:0009408: response to heat3.11E-02
157GO:0071554: cell wall organization or biogenesis3.20E-02
158GO:0000302: response to reactive oxygen species3.20E-02
159GO:0006468: protein phosphorylation3.22E-02
160GO:0009753: response to jasmonic acid3.39E-02
161GO:0009567: double fertilization forming a zygote and endosperm3.67E-02
162GO:0005975: carbohydrate metabolic process3.81E-02
163GO:0009615: response to virus4.16E-02
164GO:0009816: defense response to bacterium, incompatible interaction4.33E-02
165GO:0006906: vesicle fusion4.50E-02
RankGO TermAdjusted P value
1GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
2GO:0102867: molybdenum cofactor sulfurtransferase activity0.00E+00
3GO:0050334: thiaminase activity0.00E+00
4GO:0033759: flavone synthase activity0.00E+00
5GO:0004610: phosphoacetylglucosamine mutase activity0.00E+00
6GO:0030552: cAMP binding9.08E-05
7GO:0030553: cGMP binding9.08E-05
8GO:0005216: ion channel activity1.45E-04
9GO:0102391: decanoate--CoA ligase activity2.02E-04
10GO:0004467: long-chain fatty acid-CoA ligase activity2.64E-04
11GO:0005249: voltage-gated potassium channel activity2.99E-04
12GO:0030551: cyclic nucleotide binding2.99E-04
13GO:0047940: glucuronokinase activity3.19E-04
14GO:2001147: camalexin binding3.19E-04
15GO:0009000: selenocysteine lyase activity3.19E-04
16GO:0015245: fatty acid transporter activity3.19E-04
17GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity3.19E-04
18GO:2001227: quercitrin binding3.19E-04
19GO:0050736: O-malonyltransferase activity6.97E-04
20GO:0008428: ribonuclease inhibitor activity6.97E-04
21GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity6.97E-04
22GO:0003994: aconitate hydratase activity6.97E-04
23GO:0032934: sterol binding6.97E-04
24GO:0004806: triglyceride lipase activity8.61E-04
25GO:0032403: protein complex binding1.13E-03
26GO:0003979: UDP-glucose 6-dehydrogenase activity1.13E-03
27GO:0008265: Mo-molybdopterin cofactor sulfurase activity1.13E-03
28GO:0004324: ferredoxin-NADP+ reductase activity1.13E-03
29GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity1.13E-03
30GO:0043169: cation binding1.13E-03
31GO:0005217: intracellular ligand-gated ion channel activity1.26E-03
32GO:0004970: ionotropic glutamate receptor activity1.26E-03
33GO:0035529: NADH pyrophosphatase activity1.62E-03
34GO:0010178: IAA-amino acid conjugate hydrolase activity1.62E-03
35GO:0017077: oxidative phosphorylation uncoupler activity1.62E-03
36GO:0004364: glutathione transferase activity1.72E-03
37GO:0050378: UDP-glucuronate 4-epimerase activity2.18E-03
38GO:0009916: alternative oxidase activity2.18E-03
39GO:0008948: oxaloacetate decarboxylase activity2.78E-03
40GO:0016773: phosphotransferase activity, alcohol group as acceptor2.78E-03
41GO:0005496: steroid binding2.78E-03
42GO:0047631: ADP-ribose diphosphatase activity2.78E-03
43GO:0030151: molybdenum ion binding2.78E-03
44GO:0000210: NAD+ diphosphatase activity3.43E-03
45GO:0008519: ammonium transmembrane transporter activity3.43E-03
46GO:0003978: UDP-glucose 4-epimerase activity4.13E-03
47GO:0004144: diacylglycerol O-acyltransferase activity4.13E-03
48GO:0004656: procollagen-proline 4-dioxygenase activity4.13E-03
49GO:0008113: peptide-methionine (S)-S-oxide reductase activity4.13E-03
50GO:0033743: peptide-methionine (R)-S-oxide reductase activity4.13E-03
51GO:0008320: protein transmembrane transporter activity4.87E-03
52GO:0043295: glutathione binding4.87E-03
53GO:0008235: metalloexopeptidase activity4.87E-03
54GO:0005509: calcium ion binding5.31E-03
55GO:0005544: calcium-dependent phospholipid binding5.66E-03
56GO:0004033: aldo-keto reductase (NADP) activity5.66E-03
57GO:0004714: transmembrane receptor protein tyrosine kinase activity5.66E-03
58GO:0004034: aldose 1-epimerase activity5.66E-03
59GO:0030247: polysaccharide binding6.48E-03
60GO:0008142: oxysterol binding6.49E-03
61GO:0047617: acyl-CoA hydrolase activity8.27E-03
62GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors9.12E-03
63GO:0004864: protein phosphatase inhibitor activity9.22E-03
64GO:0004568: chitinase activity9.22E-03
65GO:0004177: aminopeptidase activity1.02E-02
66GO:0016787: hydrolase activity1.02E-02
67GO:0051539: 4 iron, 4 sulfur cluster binding1.04E-02
68GO:0004674: protein serine/threonine kinase activity1.09E-02
69GO:0005198: structural molecule activity1.33E-02
70GO:0008266: poly(U) RNA binding1.34E-02
71GO:0003774: motor activity1.34E-02
72GO:0051287: NAD binding1.43E-02
73GO:0008061: chitin binding1.45E-02
74GO:0003712: transcription cofactor activity1.45E-02
75GO:0001046: core promoter sequence-specific DNA binding1.69E-02
76GO:0051536: iron-sulfur cluster binding1.69E-02
77GO:0004499: N,N-dimethylaniline monooxygenase activity2.33E-02
78GO:0016746: transferase activity, transferring acyl groups2.34E-02
79GO:0042803: protein homodimerization activity2.54E-02
80GO:0004871: signal transducer activity2.54E-02
81GO:0046872: metal ion binding2.58E-02
82GO:0043565: sequence-specific DNA binding2.74E-02
83GO:0016301: kinase activity2.86E-02
84GO:0050662: coenzyme binding2.90E-02
85GO:0016853: isomerase activity2.90E-02
86GO:0030170: pyridoxal phosphate binding3.16E-02
87GO:0005507: copper ion binding3.27E-02
88GO:0004197: cysteine-type endopeptidase activity3.35E-02
89GO:0005516: calmodulin binding3.55E-02
90GO:0004675: transmembrane receptor protein serine/threonine kinase activity3.65E-02
91GO:0008237: metallopeptidase activity3.83E-02
92GO:0008483: transaminase activity3.83E-02
93GO:0016413: O-acetyltransferase activity3.99E-02
94GO:0008375: acetylglucosaminyltransferase activity4.50E-02
RankGO TermAdjusted P value
1GO:0016021: integral component of membrane6.90E-08
2GO:0005794: Golgi apparatus2.42E-05
3GO:0045252: oxoglutarate dehydrogenase complex3.19E-04
4GO:0005802: trans-Golgi network3.34E-04
5GO:0005789: endoplasmic reticulum membrane5.45E-04
6GO:0017119: Golgi transport complex6.75E-04
7GO:0005886: plasma membrane8.06E-04
8GO:0005887: integral component of plasma membrane9.10E-04
9GO:0005768: endosome1.55E-03
10GO:0030658: transport vesicle membrane1.62E-03
11GO:0000164: protein phosphatase type 1 complex2.78E-03
12GO:0000813: ESCRT I complex2.78E-03
13GO:0031965: nuclear membrane3.56E-03
14GO:0005783: endoplasmic reticulum5.00E-03
15GO:0030665: clathrin-coated vesicle membrane8.27E-03
16GO:0005829: cytosol8.34E-03
17GO:0031225: anchored component of membrane1.21E-02
18GO:0070469: respiratory chain1.81E-02
19GO:0005743: mitochondrial inner membrane2.84E-02
20GO:0005623: cell2.92E-02
21GO:0009504: cell plate3.05E-02
22GO:0019898: extrinsic component of membrane3.05E-02
23GO:0032580: Golgi cisterna membrane3.67E-02
24GO:0009705: plant-type vacuole membrane3.92E-02
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Gene type



Gene DE type