Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G07360

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0080127: fruit septum development0.00E+00
2GO:0006664: glycolipid metabolic process0.00E+00
3GO:1900037: regulation of cellular response to hypoxia0.00E+00
4GO:0006907: pinocytosis0.00E+00
5GO:0010422: regulation of brassinosteroid biosynthetic process0.00E+00
6GO:1905255: regulation of RNA binding transcription factor activity0.00E+00
7GO:0046620: regulation of organ growth1.64E-05
8GO:0016131: brassinosteroid metabolic process1.50E-04
9GO:0009733: response to auxin1.80E-04
10GO:0015904: tetracycline transport4.02E-04
11GO:0034757: negative regulation of iron ion transport4.02E-04
12GO:0046520: sphingoid biosynthetic process4.02E-04
13GO:0040008: regulation of growth5.52E-04
14GO:0006741: NADP biosynthetic process8.71E-04
15GO:0010271: regulation of chlorophyll catabolic process8.71E-04
16GO:0009786: regulation of asymmetric cell division8.71E-04
17GO:0031648: protein destabilization8.71E-04
18GO:0080117: secondary growth1.41E-03
19GO:0071398: cellular response to fatty acid1.41E-03
20GO:0019674: NAD metabolic process1.41E-03
21GO:0090506: axillary shoot meristem initiation1.41E-03
22GO:0009734: auxin-activated signaling pathway1.94E-03
23GO:0019363: pyridine nucleotide biosynthetic process2.04E-03
24GO:0010371: regulation of gibberellin biosynthetic process2.04E-03
25GO:0051513: regulation of monopolar cell growth2.04E-03
26GO:0006021: inositol biosynthetic process2.74E-03
27GO:0009755: hormone-mediated signaling pathway2.74E-03
28GO:0048629: trichome patterning2.74E-03
29GO:0009926: auxin polar transport2.80E-03
30GO:0045487: gibberellin catabolic process3.51E-03
31GO:0010438: cellular response to sulfur starvation3.51E-03
32GO:0009696: salicylic acid metabolic process3.51E-03
33GO:0010087: phloem or xylem histogenesis4.03E-03
34GO:0009741: response to brassinosteroid4.34E-03
35GO:0010268: brassinosteroid homeostasis4.34E-03
36GO:0006655: phosphatidylglycerol biosynthetic process4.35E-03
37GO:1902456: regulation of stomatal opening4.35E-03
38GO:0048831: regulation of shoot system development4.35E-03
39GO:0003006: developmental process involved in reproduction4.35E-03
40GO:0010358: leaf shaping4.35E-03
41GO:0016554: cytidine to uridine editing4.35E-03
42GO:0031930: mitochondria-nucleus signaling pathway5.24E-03
43GO:0006694: steroid biosynthetic process5.24E-03
44GO:0048509: regulation of meristem development5.24E-03
45GO:0016132: brassinosteroid biosynthetic process5.36E-03
46GO:0071554: cell wall organization or biogenesis5.36E-03
47GO:0032502: developmental process5.73E-03
48GO:0080186: developmental vegetative growth6.19E-03
49GO:0006402: mRNA catabolic process7.20E-03
50GO:0010439: regulation of glucosinolate biosynthetic process7.20E-03
51GO:0009690: cytokinin metabolic process7.20E-03
52GO:0009704: de-etiolation7.20E-03
53GO:2000070: regulation of response to water deprivation7.20E-03
54GO:0000105: histidine biosynthetic process7.20E-03
55GO:0009819: drought recovery7.20E-03
56GO:0042255: ribosome assembly7.20E-03
57GO:0006353: DNA-templated transcription, termination7.20E-03
58GO:0032544: plastid translation8.26E-03
59GO:0007186: G-protein coupled receptor signaling pathway8.26E-03
60GO:0048573: photoperiodism, flowering9.16E-03
61GO:0051865: protein autoubiquitination9.38E-03
62GO:0000373: Group II intron splicing9.38E-03
63GO:0009056: catabolic process9.38E-03
64GO:0048507: meristem development9.38E-03
65GO:0045892: negative regulation of transcription, DNA-templated1.03E-02
66GO:0010018: far-red light signaling pathway1.06E-02
67GO:1900865: chloroplast RNA modification1.06E-02
68GO:0000160: phosphorelay signal transduction system1.07E-02
69GO:0009870: defense response signaling pathway, resistance gene-dependent1.18E-02
70GO:0048829: root cap development1.18E-02
71GO:0009641: shade avoidance1.18E-02
72GO:0010629: negative regulation of gene expression1.18E-02
73GO:0009867: jasmonic acid mediated signaling pathway1.29E-02
74GO:0009682: induced systemic resistance1.30E-02
75GO:0010582: floral meristem determinacy1.44E-02
76GO:0010105: negative regulation of ethylene-activated signaling pathway1.44E-02
77GO:0006790: sulfur compound metabolic process1.44E-02
78GO:0012501: programmed cell death1.44E-02
79GO:0016024: CDP-diacylglycerol biosynthetic process1.44E-02
80GO:0006631: fatty acid metabolic process1.54E-02
81GO:2000028: regulation of photoperiodism, flowering1.57E-02
82GO:0009767: photosynthetic electron transport chain1.57E-02
83GO:0010588: cotyledon vascular tissue pattern formation1.57E-02
84GO:0010102: lateral root morphogenesis1.57E-02
85GO:0010223: secondary shoot formation1.71E-02
86GO:0009887: animal organ morphogenesis1.71E-02
87GO:0006302: double-strand break repair1.71E-02
88GO:0048467: gynoecium development1.71E-02
89GO:0042546: cell wall biogenesis1.74E-02
90GO:0090351: seedling development1.86E-02
91GO:0046854: phosphatidylinositol phosphorylation1.86E-02
92GO:0042753: positive regulation of circadian rhythm2.01E-02
93GO:0005992: trehalose biosynthetic process2.16E-02
94GO:0009736: cytokinin-activated signaling pathway2.25E-02
95GO:0051321: meiotic cell cycle2.48E-02
96GO:0016114: terpenoid biosynthetic process2.48E-02
97GO:0010431: seed maturation2.48E-02
98GO:0006306: DNA methylation2.48E-02
99GO:2000022: regulation of jasmonic acid mediated signaling pathway2.64E-02
100GO:0048367: shoot system development2.75E-02
101GO:0010082: regulation of root meristem growth2.81E-02
102GO:0001944: vasculature development2.81E-02
103GO:0009625: response to insect2.81E-02
104GO:0009693: ethylene biosynthetic process2.81E-02
105GO:0071215: cellular response to abscisic acid stimulus2.81E-02
106GO:0009686: gibberellin biosynthetic process2.81E-02
107GO:0006351: transcription, DNA-templated2.87E-02
108GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway3.07E-02
109GO:0070417: cellular response to cold3.16E-02
110GO:0009416: response to light stimulus3.24E-02
111GO:0080022: primary root development3.34E-02
112GO:0010118: stomatal movement3.34E-02
113GO:0010305: leaf vascular tissue pattern formation3.53E-02
114GO:0009958: positive gravitropism3.53E-02
115GO:0010182: sugar mediated signaling pathway3.53E-02
116GO:0009646: response to absence of light3.71E-02
117GO:0008654: phospholipid biosynthetic process3.90E-02
118GO:0010583: response to cyclopentenone4.29E-02
119GO:0019761: glucosinolate biosynthetic process4.29E-02
120GO:0007275: multicellular organism development4.34E-02
121GO:1901657: glycosyl compound metabolic process4.49E-02
122GO:0030163: protein catabolic process4.49E-02
123GO:0016042: lipid catabolic process4.60E-02
124GO:0009639: response to red or far red light4.69E-02
125GO:0016125: sterol metabolic process4.69E-02
126GO:0007165: signal transduction4.80E-02
RankGO TermAdjusted P value
1GO:0071633: dihydroceramidase activity0.00E+00
2GO:0047793: cycloeucalenol cycloisomerase activity0.00E+00
3GO:0052834: inositol monophosphate phosphatase activity0.00E+00
4GO:0004401: histidinol-phosphatase activity0.00E+00
5GO:0008395: steroid hydroxylase activity4.02E-04
6GO:0042736: NADH kinase activity4.02E-04
7GO:0010347: L-galactose-1-phosphate phosphatase activity4.02E-04
8GO:0010012: steroid 22-alpha hydroxylase activity4.02E-04
9GO:0000170: sphingosine hydroxylase activity4.02E-04
10GO:0050139: nicotinate-N-glucosyltransferase activity4.02E-04
11GO:0005227: calcium activated cation channel activity4.02E-04
12GO:0045543: gibberellin 2-beta-dioxygenase activity8.71E-04
13GO:0010296: prenylcysteine methylesterase activity8.71E-04
14GO:0052832: inositol monophosphate 3-phosphatase activity8.71E-04
15GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity8.71E-04
16GO:0008805: carbon-monoxide oxygenase activity8.71E-04
17GO:0042284: sphingolipid delta-4 desaturase activity8.71E-04
18GO:0008934: inositol monophosphate 1-phosphatase activity8.71E-04
19GO:0008493: tetracycline transporter activity8.71E-04
20GO:0052833: inositol monophosphate 4-phosphatase activity8.71E-04
21GO:0009884: cytokinin receptor activity8.71E-04
22GO:0005034: osmosensor activity1.41E-03
23GO:0080031: methyl salicylate esterase activity2.04E-03
24GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity2.04E-03
25GO:0046527: glucosyltransferase activity2.74E-03
26GO:0019199: transmembrane receptor protein kinase activity2.74E-03
27GO:0004871: signal transducer activity2.82E-03
28GO:0004722: protein serine/threonine phosphatase activity3.05E-03
29GO:0004523: RNA-DNA hybrid ribonuclease activity3.51E-03
30GO:0004605: phosphatidate cytidylyltransferase activity4.35E-03
31GO:0080030: methyl indole-3-acetate esterase activity4.35E-03
32GO:0004709: MAP kinase kinase kinase activity4.35E-03
33GO:0019900: kinase binding5.24E-03
34GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity5.24E-03
35GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity5.24E-03
36GO:0016832: aldehyde-lyase activity5.24E-03
37GO:0003886: DNA (cytosine-5-)-methyltransferase activity5.24E-03
38GO:0004518: nuclease activity5.73E-03
39GO:0016413: O-acetyltransferase activity7.34E-03
40GO:0003951: NAD+ kinase activity8.26E-03
41GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen8.87E-03
42GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity9.38E-03
43GO:0004673: protein histidine kinase activity1.18E-02
44GO:0004805: trehalose-phosphatase activity1.18E-02
45GO:0016614: oxidoreductase activity, acting on CH-OH group of donors1.18E-02
46GO:0003725: double-stranded RNA binding1.57E-02
47GO:0000155: phosphorelay sensor kinase activity1.57E-02
48GO:0043621: protein self-association1.81E-02
49GO:0003712: transcription cofactor activity1.86E-02
50GO:0004190: aspartic-type endopeptidase activity1.86E-02
51GO:0031418: L-ascorbic acid binding2.16E-02
52GO:0016788: hydrolase activity, acting on ester bonds2.31E-02
53GO:0043424: protein histidine kinase binding2.32E-02
54GO:0005345: purine nucleobase transmembrane transporter activity2.32E-02
55GO:0016298: lipase activity2.33E-02
56GO:0033612: receptor serine/threonine kinase binding2.48E-02
57GO:0003964: RNA-directed DNA polymerase activity2.48E-02
58GO:0008408: 3'-5' exonuclease activity2.48E-02
59GO:0010333: terpene synthase activity2.48E-02
60GO:0003700: transcription factor activity, sequence-specific DNA binding2.60E-02
61GO:0003727: single-stranded RNA binding2.99E-02
62GO:0016874: ligase activity3.02E-02
63GO:0003779: actin binding3.11E-02
64GO:0052689: carboxylic ester hydrolase activity3.34E-02
65GO:0005199: structural constituent of cell wall3.53E-02
66GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity3.53E-02
67GO:0003676: nucleic acid binding3.65E-02
68GO:0050662: coenzyme binding3.71E-02
69GO:0042803: protein homodimerization activity3.90E-02
70GO:0019843: rRNA binding4.01E-02
71GO:0016762: xyloglucan:xyloglucosyl transferase activity4.09E-02
72GO:0016301: kinase activity4.09E-02
73GO:0000156: phosphorelay response regulator activity4.49E-02
74GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding4.56E-02
75GO:0003677: DNA binding4.66E-02
76GO:0016759: cellulose synthase activity4.69E-02
RankGO TermAdjusted P value
1GO:0000791: euchromatin4.02E-04
2GO:0030870: Mre11 complex8.71E-04
3GO:0030139: endocytic vesicle1.41E-03
4GO:0032585: multivesicular body membrane2.04E-03
5GO:0009654: photosystem II oxygen evolving complex2.41E-03
6GO:0009544: chloroplast ATP synthase complex2.74E-03
7GO:0000795: synaptonemal complex3.51E-03
8GO:0019898: extrinsic component of membrane5.01E-03
9GO:0009986: cell surface6.19E-03
10GO:0010494: cytoplasmic stress granule9.38E-03
11GO:0030095: chloroplast photosystem II1.71E-02
12GO:0005875: microtubule associated complex2.01E-02
13GO:0009532: plastid stroma2.48E-02
14GO:0005834: heterotrimeric G-protein complex2.84E-02
15GO:0005634: nucleus3.42E-02
16GO:0009504: cell plate3.90E-02
17GO:0000785: chromatin4.29E-02
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Gene type



Gene DE type