co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G06483

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0046460: neutral lipid biosynthetic process	0.00E+00
2	GO:0031116: positive regulation of microtubule polymerization	0.00E+00
3	GO:0010203: response to very low fluence red light stimulus	0.00E+00
4	GO:0051322: anaphase	6.01E-06
5	GO:0006552: leucine catabolic process	6.01E-06
6	GO:0048657: anther wall tapetum cell differentiation	7.90E-05
7	GO:0000012: single strand break repair	7.90E-05
8	GO:0042547: cell wall modification involved in multidimensional cell growth	7.90E-05
9	GO:0015798: myo-inositol transport	7.90E-05
10	GO:0010201: response to continuous far red light stimulus by the high-irradiance response system	7.90E-05
11	GO:0043087: regulation of GTPase activity	7.90E-05
12	GO:0048508: embryonic meristem development	7.90E-05
13	GO:0080005: photosystem stoichiometry adjustment	1.89E-04
14	GO:0009945: radial axis specification	1.89E-04
15	GO:0006435: threonyl-tRNA aminoacylation	1.89E-04
16	GO:0010073: meristem maintenance	2.59E-04
17	GO:0017006: protein-tetrapyrrole linkage	3.17E-04
18	GO:0001578: microtubule bundle formation	3.17E-04
19	GO:0006168: adenine salvage	4.58E-04
20	GO:0006166: purine ribonucleoside salvage	4.58E-04
21	GO:0046653: tetrahydrofolate metabolic process	4.58E-04
22	GO:0009584: detection of visible light	4.58E-04
23	GO:0010268: brassinosteroid homeostasis	4.69E-04
24	GO:0016132: brassinosteroid biosynthetic process	5.76E-04
25	GO:0007020: microtubule nucleation	6.09E-04
26	GO:0016125: sterol metabolic process	6.94E-04
27	GO:0046785: microtubule polymerization	7.72E-04
28	GO:0044209: AMP salvage	7.72E-04
29	GO:0000910: cytokinesis	7.78E-04
30	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	9.42E-04
31	GO:0006559: L-phenylalanine catabolic process	9.42E-04
32	GO:0017148: negative regulation of translation	1.12E-03
33	GO:0009942: longitudinal axis specification	1.12E-03
34	GO:0034389: lipid particle organization	1.12E-03
35	GO:0022904: respiratory electron transport chain	1.31E-03
36	GO:0010161: red light signaling pathway	1.31E-03
37	GO:0048528: post-embryonic root development	1.31E-03
38	GO:0009704: de-etiolation	1.51E-03
39	GO:0045010: actin nucleation	1.51E-03
40	GO:0007155: cell adhesion	1.51E-03
41	GO:0006353: DNA-templated transcription, termination	1.51E-03
42	GO:0009808: lignin metabolic process	1.72E-03
43	GO:0022900: electron transport chain	1.72E-03
44	GO:0009827: plant-type cell wall modification	1.72E-03
45	GO:0009821: alkaloid biosynthetic process	1.95E-03
46	GO:0046685: response to arsenic-containing substance	1.95E-03
47	GO:0019432: triglyceride biosynthetic process	1.95E-03
48	GO:0008202: steroid metabolic process	2.18E-03
49	GO:0009638: phototropism	2.18E-03
50	GO:0045036: protein targeting to chloroplast	2.41E-03
51	GO:0010215: cellulose microfibril organization	2.41E-03
52	GO:0010152: pollen maturation	2.92E-03
53	GO:0009767: photosynthetic electron transport chain	3.18E-03
54	GO:0010207: photosystem II assembly	3.45E-03
55	GO:0006302: double-strand break repair	3.45E-03
56	GO:0090351: seedling development	3.73E-03
57	GO:0006071: glycerol metabolic process	4.02E-03
58	GO:0006508: proteolysis	4.35E-03
59	GO:0006825: copper ion transport	4.61E-03
60	GO:0043622: cortical microtubule organization	4.61E-03
61	GO:0051260: protein homooligomerization	4.92E-03
62	GO:0009814: defense response, incompatible interaction	5.24E-03
63	GO:0031348: negative regulation of defense response	5.24E-03
64	GO:0080092: regulation of pollen tube growth	5.24E-03
65	GO:0006730: one-carbon metabolic process	5.24E-03
66	GO:0010584: pollen exine formation	5.89E-03
67	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	6.22E-03
68	GO:0048653: anther development	6.57E-03
69	GO:0006520: cellular amino acid metabolic process	6.92E-03
70	GO:0010197: polar nucleus fusion	6.92E-03
71	GO:0046323: glucose import	6.92E-03
72	GO:0045489: pectin biosynthetic process	6.92E-03
73	GO:0006468: protein phosphorylation	7.06E-03
74	GO:0007018: microtubule-based movement	7.28E-03
75	GO:0009646: response to absence of light	7.28E-03
76	GO:0071554: cell wall organization or biogenesis	8.01E-03
77	GO:0010583: response to cyclopentenone	8.39E-03
78	GO:0009630: gravitropism	8.39E-03
79	GO:0010090: trichome morphogenesis	8.77E-03
80	GO:0009911: positive regulation of flower development	1.04E-02
81	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.10E-02
82	GO:0046777: protein autophosphorylation	1.13E-02
83	GO:0048573: photoperiodism, flowering	1.16E-02
84	GO:0016049: cell growth	1.21E-02
85	GO:0030244: cellulose biosynthetic process	1.25E-02
86	GO:0018298: protein-chromophore linkage	1.25E-02
87	GO:0010218: response to far red light	1.34E-02
88	GO:0009834: plant-type secondary cell wall biogenesis	1.34E-02
89	GO:0045087: innate immune response	1.48E-02
90	GO:0009853: photorespiration	1.48E-02
91	GO:0006281: DNA repair	1.57E-02
92	GO:0008283: cell proliferation	1.77E-02
93	GO:0009640: photomorphogenesis	1.77E-02
94	GO:0009846: pollen germination	2.08E-02
95	GO:0009585: red, far-red light phototransduction	2.19E-02
96	GO:0010224: response to UV-B	2.24E-02
97	GO:0006417: regulation of translation	2.35E-02
98	GO:0006096: glycolytic process	2.46E-02
99	GO:0009058: biosynthetic process	3.42E-02
100	GO:0006413: translational initiation	3.94E-02
101	GO:0040008: regulation of growth	4.01E-02
102	GO:0055114: oxidation-reduction process	4.07E-02
103	GO:0045490: pectin catabolic process	4.14E-02
104	GO:0007166: cell surface receptor signaling pathway	4.56E-02
105	GO:0010468: regulation of gene expression	4.70E-02

Rank	GO Term	Adjusted P value
1	GO:0004174: electron-transferring-flavoprotein dehydrogenase activity	0.00E+00
2	GO:0008115: sarcosine oxidase activity	0.00E+00
3	GO:0048039: ubiquinone binding	0.00E+00
4	GO:1990055: phenylacetaldehyde synthase activity	0.00E+00
5	GO:0043783: oxidoreductase activity, oxidizing metal ions with flavin as acceptor	0.00E+00
6	GO:0017005: 3'-tyrosyl-DNA phosphodiesterase activity	0.00E+00
7	GO:0031516: far-red light photoreceptor activity	7.90E-05
8	GO:0004837: tyrosine decarboxylase activity	7.90E-05
9	GO:0004485: methylcrotonoyl-CoA carboxylase activity	7.90E-05
10	GO:0004008: copper-exporting ATPase activity	7.90E-05
11	GO:0004829: threonine-tRNA ligase activity	1.89E-04
12	GO:0005366: myo-inositol:proton symporter activity	1.89E-04
13	GO:0009883: red or far-red light photoreceptor activity	1.89E-04
14	GO:0004326: tetrahydrofolylpolyglutamate synthase activity	1.89E-04
15	GO:0032549: ribonucleoside binding	3.17E-04
16	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	3.17E-04
17	GO:0004075: biotin carboxylase activity	3.17E-04
18	GO:0008020: G-protein coupled photoreceptor activity	3.17E-04
19	GO:0047334: diphosphate-fructose-6-phosphate 1-phosphotransferase activity	3.17E-04
20	GO:0016805: dipeptidase activity	3.17E-04
21	GO:0008430: selenium binding	3.17E-04
22	GO:0004180: carboxypeptidase activity	3.17E-04
23	GO:0010277: chlorophyllide a oxygenase [overall] activity	3.17E-04
24	GO:0003999: adenine phosphoribosyltransferase activity	4.58E-04
25	GO:0005354: galactose transmembrane transporter activity	4.58E-04
26	GO:0015144: carbohydrate transmembrane transporter activity	5.97E-04
27	GO:0005351: sugar:proton symporter activity	6.93E-04
28	GO:0008017: microtubule binding	7.55E-04
29	GO:0016413: O-acetyltransferase activity	7.78E-04
30	GO:0004144: diacylglycerol O-acyltransferase activity	1.12E-03
31	GO:0043022: ribosome binding	1.51E-03
32	GO:0008142: oxysterol binding	1.72E-03
33	GO:0005375: copper ion transmembrane transporter activity	1.72E-03
34	GO:0051537: 2 iron, 2 sulfur cluster binding	1.83E-03
35	GO:0016844: strictosidine synthase activity	2.18E-03
36	GO:0004673: protein histidine kinase activity	2.41E-03
37	GO:0005089: Rho guanyl-nucleotide exchange factor activity	2.66E-03
38	GO:0001054: RNA polymerase I activity	2.66E-03
39	GO:0000155: phosphorelay sensor kinase activity	3.18E-03
40	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	3.18E-03
41	GO:0004190: aspartic-type endopeptidase activity	3.73E-03
42	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	4.12E-03
43	GO:0004672: protein kinase activity	5.18E-03
44	GO:0030570: pectate lyase activity	5.56E-03
45	GO:0004527: exonuclease activity	6.92E-03
46	GO:0005355: glucose transmembrane transporter activity	7.28E-03
47	GO:0048038: quinone binding	8.01E-03
48	GO:0004518: nuclease activity	8.39E-03
49	GO:0019825: oxygen binding	8.44E-03
50	GO:0008237: metallopeptidase activity	9.56E-03
51	GO:0004497: monooxygenase activity	1.06E-02
52	GO:0008236: serine-type peptidase activity	1.21E-02
53	GO:0005096: GTPase activator activity	1.29E-02
54	GO:0005506: iron ion binding	1.29E-02
55	GO:0050897: cobalt ion binding	1.38E-02
56	GO:0003697: single-stranded DNA binding	1.48E-02
57	GO:0051539: 4 iron, 4 sulfur cluster binding	1.62E-02
58	GO:0009055: electron carrier activity	1.68E-02
59	GO:0005524: ATP binding	1.82E-02
60	GO:0035091: phosphatidylinositol binding	1.87E-02
61	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	2.19E-02
62	GO:0003690: double-stranded DNA binding	2.24E-02
63	GO:0003777: microtubule motor activity	2.35E-02
64	GO:0020037: heme binding	2.35E-02
65	GO:0031625: ubiquitin protein ligase binding	2.35E-02
66	GO:0016887: ATPase activity	2.44E-02
67	GO:0016301: kinase activity	3.10E-02
68	GO:0004674: protein serine/threonine kinase activity	3.18E-02
69	GO:0016829: lyase activity	3.49E-02
70	GO:0030170: pyridoxal phosphate binding	3.55E-02
71	GO:0004252: serine-type endopeptidase activity	3.55E-02
72	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.94E-02
73	GO:0003743: translation initiation factor activity	4.63E-02
74	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	4.91E-02
75	GO:0042802: identical protein binding	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0017133: mitochondrial electron transfer flavoprotein complex	0.00E+00
2	GO:0009574: preprophase band	2.51E-06
3	GO:0010318: pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex	7.90E-05
4	GO:0030660: Golgi-associated vesicle membrane	6.09E-04
5	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	6.09E-04
6	GO:0072686: mitotic spindle	7.72E-04
7	GO:0031209: SCAR complex	9.42E-04
8	GO:0010005: cortical microtubule, transverse to long axis	1.12E-03
9	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	1.51E-03
10	GO:0031305: integral component of mitochondrial inner membrane	1.51E-03
11	GO:0005874: microtubule	1.53E-03
12	GO:0005811: lipid particle	1.72E-03
13	GO:0005736: DNA-directed RNA polymerase I complex	1.95E-03
14	GO:0016604: nuclear body	2.18E-03
15	GO:0055028: cortical microtubule	2.41E-03
16	GO:0005740: mitochondrial envelope	2.41E-03
17	GO:0016324: apical plasma membrane	2.41E-03
18	GO:0005765: lysosomal membrane	2.66E-03
19	GO:0005938: cell cortex	3.18E-03
20	GO:0005773: vacuole	3.38E-03
21	GO:0009524: phragmoplast	4.23E-03
22	GO:0016021: integral component of membrane	4.70E-03
23	GO:0005759: mitochondrial matrix	5.03E-03
24	GO:0005871: kinesin complex	6.22E-03
25	GO:0046658: anchored component of plasma membrane	7.31E-03
26	GO:0005768: endosome	1.15E-02
27	GO:0009507: chloroplast	1.41E-02
28	GO:0005819: spindle	1.57E-02
29	GO:0005856: cytoskeleton	1.92E-02
30	GO:0005886: plasma membrane	2.41E-02
31	GO:0016607: nuclear speck	2.52E-02
32	GO:0010008: endosome membrane	2.52E-02
33	GO:0009706: chloroplast inner membrane	2.81E-02
34	GO:0009705: plant-type vacuole membrane	4.14E-02
35	GO:0031225: anchored component of membrane	4.34E-02
36	GO:0005802: trans-Golgi network	4.45E-02