co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G06300

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010055: atrichoblast differentiation	0.00E+00
2	GO:1902001: fatty acid transmembrane transport	0.00E+00
3	GO:0043620: regulation of DNA-templated transcription in response to stress	0.00E+00
4	GO:2001253: regulation of histone H3-K36 trimethylation	0.00E+00
5	GO:0002376: immune system process	0.00E+00
6	GO:0018063: cytochrome c-heme linkage	0.00E+00
7	GO:0010793: regulation of mRNA export from nucleus	0.00E+00
8	GO:0009617: response to bacterium	3.59E-06
9	GO:0010112: regulation of systemic acquired resistance	1.28E-05
10	GO:0009636: response to toxic substance	1.94E-05
11	GO:0009759: indole glucosinolate biosynthetic process	1.17E-04
12	GO:0050832: defense response to fungus	1.92E-04
13	GO:1900056: negative regulation of leaf senescence	2.10E-04
14	GO:1900057: positive regulation of leaf senescence	2.10E-04
15	GO:1990542: mitochondrial transmembrane transport	2.75E-04
16	GO:0032107: regulation of response to nutrient levels	2.75E-04
17	GO:0080173: male-female gamete recognition during double fertilization	2.75E-04
18	GO:0033306: phytol metabolic process	2.75E-04
19	GO:0009700: indole phytoalexin biosynthetic process	2.75E-04
20	GO:0010482: regulation of epidermal cell division	2.75E-04
21	GO:0010230: alternative respiration	2.75E-04
22	GO:0034214: protein hexamerization	2.75E-04
23	GO:0046467: membrane lipid biosynthetic process	2.75E-04
24	GO:0006680: glucosylceramide catabolic process	2.75E-04
25	GO:1900384: regulation of flavonol biosynthetic process	2.75E-04
26	GO:0010120: camalexin biosynthetic process	3.27E-04
27	GO:0042742: defense response to bacterium	3.43E-04
28	GO:0009835: fruit ripening	3.94E-04
29	GO:0051607: defense response to virus	4.94E-04
30	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	6.04E-04
31	GO:0055088: lipid homeostasis	6.04E-04
32	GO:0050684: regulation of mRNA processing	6.04E-04
33	GO:0019521: D-gluconate metabolic process	6.04E-04
34	GO:0019632: shikimate metabolic process	6.04E-04
35	GO:0015908: fatty acid transport	6.04E-04
36	GO:0000719: photoreactive repair	6.04E-04
37	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	6.04E-04
38	GO:0019725: cellular homeostasis	6.04E-04
39	GO:0051252: regulation of RNA metabolic process	6.04E-04
40	GO:0071668: plant-type cell wall assembly	6.04E-04
41	GO:0009407: toxin catabolic process	8.42E-04
42	GO:0071398: cellular response to fatty acid	9.79E-04
43	GO:0010186: positive regulation of cellular defense response	9.79E-04
44	GO:0010366: negative regulation of ethylene biosynthetic process	9.79E-04
45	GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process	9.79E-04
46	GO:0002230: positive regulation of defense response to virus by host	9.79E-04
47	GO:0043328: protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway	9.79E-04
48	GO:0006048: UDP-N-acetylglucosamine biosynthetic process	9.79E-04
49	GO:0080163: regulation of protein serine/threonine phosphatase activity	9.79E-04
50	GO:0032784: regulation of DNA-templated transcription, elongation	9.79E-04
51	GO:0000162: tryptophan biosynthetic process	1.14E-03
52	GO:0006979: response to oxidative stress	1.22E-03
53	GO:0006952: defense response	1.32E-03
54	GO:0051707: response to other organism	1.37E-03
55	GO:0006020: inositol metabolic process	1.40E-03
56	GO:0070301: cellular response to hydrogen peroxide	1.40E-03
57	GO:1902290: positive regulation of defense response to oomycetes	1.40E-03
58	GO:0001676: long-chain fatty acid metabolic process	1.40E-03
59	GO:0016998: cell wall macromolecule catabolic process	1.52E-03
60	GO:0006012: galactose metabolic process	1.81E-03
61	GO:0009693: ethylene biosynthetic process	1.81E-03
62	GO:0060548: negative regulation of cell death	1.87E-03
63	GO:0048830: adventitious root development	1.87E-03
64	GO:0006621: protein retention in ER lumen	1.87E-03
65	GO:0010600: regulation of auxin biosynthetic process	1.87E-03
66	GO:1901002: positive regulation of response to salt stress	1.87E-03
67	GO:0051567: histone H3-K9 methylation	1.87E-03
68	GO:0010188: response to microbial phytotoxin	1.87E-03
69	GO:0031365: N-terminal protein amino acid modification	2.39E-03
70	GO:0009164: nucleoside catabolic process	2.39E-03
71	GO:0046283: anthocyanin-containing compound metabolic process	2.39E-03
72	GO:0009620: response to fungus	2.79E-03
73	GO:0006623: protein targeting to vacuole	2.86E-03
74	GO:0010256: endomembrane system organization	2.95E-03
75	GO:0002238: response to molecule of fungal origin	2.95E-03
76	GO:0010200: response to chitin	3.40E-03
77	GO:0009423: chorismate biosynthetic process	3.55E-03
78	GO:0009611: response to wounding	3.94E-03
79	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	4.19E-03
80	GO:0080186: developmental vegetative growth	4.19E-03
81	GO:0050829: defense response to Gram-negative bacterium	4.19E-03
82	GO:0000122: negative regulation of transcription from RNA polymerase II promoter	4.19E-03
83	GO:0006102: isocitrate metabolic process	4.86E-03
84	GO:0030091: protein repair	4.86E-03
85	GO:0043068: positive regulation of programmed cell death	4.86E-03
86	GO:0009627: systemic acquired resistance	4.93E-03
87	GO:0017004: cytochrome complex assembly	5.57E-03
88	GO:0010208: pollen wall assembly	5.57E-03
89	GO:0006997: nucleus organization	5.57E-03
90	GO:0010204: defense response signaling pathway, resistance gene-independent	5.57E-03
91	GO:0030968: endoplasmic reticulum unfolded protein response	5.57E-03
92	GO:0009751: response to salicylic acid	5.72E-03
93	GO:0010311: lateral root formation	6.05E-03
94	GO:0046685: response to arsenic-containing substance	6.31E-03
95	GO:0006098: pentose-phosphate shunt	6.31E-03
96	GO:0051865: protein autoubiquitination	6.31E-03
97	GO:0019432: triglyceride biosynthetic process	6.31E-03
98	GO:0015031: protein transport	6.43E-03
99	GO:1900426: positive regulation of defense response to bacterium	7.09E-03
100	GO:0090332: stomatal closure	7.09E-03
101	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	7.09E-03
102	GO:0006099: tricarboxylic acid cycle	7.63E-03
103	GO:0034599: cellular response to oxidative stress	7.63E-03
104	GO:0009641: shade avoidance	7.90E-03
105	GO:0019538: protein metabolic process	7.90E-03
106	GO:0009870: defense response signaling pathway, resistance gene-dependent	7.90E-03
107	GO:0006032: chitin catabolic process	7.90E-03
108	GO:0006631: fatty acid metabolic process	8.68E-03
109	GO:0048765: root hair cell differentiation	8.74E-03
110	GO:0009684: indoleacetic acid biosynthetic process	8.74E-03
111	GO:0009682: induced systemic resistance	8.74E-03
112	GO:0052544: defense response by callose deposition in cell wall	8.74E-03
113	GO:0009073: aromatic amino acid family biosynthetic process	8.74E-03
114	GO:0005975: carbohydrate metabolic process	9.09E-03
115	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	9.61E-03
116	GO:0012501: programmed cell death	9.61E-03
117	GO:0010102: lateral root morphogenesis	1.05E-02
118	GO:2000028: regulation of photoperiodism, flowering	1.05E-02
119	GO:0031347: regulation of defense response	1.14E-02
120	GO:0002237: response to molecule of bacterial origin	1.14E-02
121	GO:0006812: cation transport	1.19E-02
122	GO:0009225: nucleotide-sugar metabolic process	1.24E-02
123	GO:0042343: indole glucosinolate metabolic process	1.24E-02
124	GO:0006813: potassium ion transport	1.27E-02
125	GO:0051302: regulation of cell division	1.55E-02
126	GO:0006874: cellular calcium ion homeostasis	1.55E-02
127	GO:0010026: trichome differentiation	1.55E-02
128	GO:0043622: cortical microtubule organization	1.55E-02
129	GO:0098542: defense response to other organism	1.65E-02
130	GO:0009269: response to desiccation	1.65E-02
131	GO:0071456: cellular response to hypoxia	1.76E-02
132	GO:0009625: response to insect	1.88E-02
133	GO:0009411: response to UV	1.88E-02
134	GO:0042147: retrograde transport, endosome to Golgi	2.11E-02
135	GO:0042391: regulation of membrane potential	2.23E-02
136	GO:0000413: protein peptidyl-prolyl isomerization	2.23E-02
137	GO:0048868: pollen tube development	2.35E-02
138	GO:0006885: regulation of pH	2.35E-02
139	GO:0006520: cellular amino acid metabolic process	2.35E-02
140	GO:0006662: glycerol ether metabolic process	2.35E-02
141	GO:0006629: lipid metabolic process	2.36E-02
142	GO:0006814: sodium ion transport	2.47E-02
143	GO:0009753: response to jasmonic acid	2.58E-02
144	GO:0009851: auxin biosynthetic process	2.60E-02
145	GO:0008152: metabolic process	2.67E-02
146	GO:0000302: response to reactive oxygen species	2.73E-02
147	GO:0010193: response to ozone	2.73E-02
148	GO:0006891: intra-Golgi vesicle-mediated transport	2.73E-02
149	GO:0010150: leaf senescence	3.14E-02
150	GO:0009615: response to virus	3.55E-02
151	GO:0007166: cell surface receptor signaling pathway	3.59E-02
152	GO:0009816: defense response to bacterium, incompatible interaction	3.69E-02
153	GO:0006974: cellular response to DNA damage stimulus	3.84E-02
154	GO:0009651: response to salt stress	4.06E-02
155	GO:0009817: defense response to fungus, incompatible interaction	4.29E-02
156	GO:0055114: oxidation-reduction process	4.33E-02
157	GO:0007165: signal transduction	4.44E-02
158	GO:0007568: aging	4.75E-02
159	GO:0048527: lateral root development	4.75E-02

Rank	GO Term	Adjusted P value
1	GO:0051670: inulinase activity	0.00E+00
2	GO:0004764: shikimate 3-dehydrogenase (NADP+) activity	0.00E+00
3	GO:0004610: phosphoacetylglucosamine mutase activity	0.00E+00
4	GO:0010298: dihydrocamalexic acid decarboxylase activity	0.00E+00
5	GO:0003855: 3-dehydroquinate dehydratase activity	0.00E+00
6	GO:0102391: decanoate--CoA ligase activity	1.60E-04
7	GO:0004467: long-chain fatty acid-CoA ligase activity	2.10E-04
8	GO:0004649: poly(ADP-ribose) glycohydrolase activity	2.75E-04
9	GO:0090353: polygalacturonase inhibitor activity	2.75E-04
10	GO:0016229: steroid dehydrogenase activity	2.75E-04
11	GO:0010179: IAA-Ala conjugate hydrolase activity	2.75E-04
12	GO:2001227: quercitrin binding	2.75E-04
13	GO:0070401: NADP+ binding	2.75E-04
14	GO:0051669: fructan beta-fructosidase activity	2.75E-04
15	GO:0004348: glucosylceramidase activity	2.75E-04
16	GO:0047940: glucuronokinase activity	2.75E-04
17	GO:0031219: levanase activity	2.75E-04
18	GO:2001147: camalexin binding	2.75E-04
19	GO:0015245: fatty acid transporter activity	2.75E-04
20	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	2.75E-04
21	GO:0050736: O-malonyltransferase activity	6.04E-04
22	GO:0008428: ribonuclease inhibitor activity	6.04E-04
23	GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity	6.04E-04
24	GO:0004806: triglyceride lipase activity	6.55E-04
25	GO:0004049: anthranilate synthase activity	9.79E-04
26	GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity	9.79E-04
27	GO:0043169: cation binding	9.79E-04
28	GO:0032403: protein complex binding	9.79E-04
29	GO:0004364: glutathione transferase activity	1.30E-03
30	GO:0017077: oxidative phosphorylation uncoupler activity	1.40E-03
31	GO:0035529: NADH pyrophosphatase activity	1.40E-03
32	GO:0004449: isocitrate dehydrogenase (NAD+) activity	1.40E-03
33	GO:0005432: calcium:sodium antiporter activity	1.40E-03
34	GO:0008106: alcohol dehydrogenase (NADP+) activity	1.40E-03
35	GO:0010178: IAA-amino acid conjugate hydrolase activity	1.40E-03
36	GO:0046923: ER retention sequence binding	1.87E-03
37	GO:0050378: UDP-glucuronate 4-epimerase activity	1.87E-03
38	GO:0009916: alternative oxidase activity	1.87E-03
39	GO:0008948: oxaloacetate decarboxylase activity	2.39E-03
40	GO:0016773: phosphotransferase activity, alcohol group as acceptor	2.39E-03
41	GO:0018685: alkane 1-monooxygenase activity	2.39E-03
42	GO:0047631: ADP-ribose diphosphatase activity	2.39E-03
43	GO:0008200: ion channel inhibitor activity	2.95E-03
44	GO:0000210: NAD+ diphosphatase activity	2.95E-03
45	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	3.55E-03
46	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	3.55E-03
47	GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	3.55E-03
48	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	3.55E-03
49	GO:0003978: UDP-glucose 4-epimerase activity	3.55E-03
50	GO:0004144: diacylglycerol O-acyltransferase activity	3.55E-03
51	GO:0008237: metallopeptidase activity	3.93E-03
52	GO:0008235: metalloexopeptidase activity	4.19E-03
53	GO:0008320: protein transmembrane transporter activity	4.19E-03
54	GO:0043295: glutathione binding	4.19E-03
55	GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity	4.86E-03
56	GO:0004034: aldose 1-epimerase activity	4.86E-03
57	GO:0005544: calcium-dependent phospholipid binding	4.86E-03
58	GO:0004033: aldo-keto reductase (NADP) activity	4.86E-03
59	GO:0015491: cation:cation antiporter activity	4.86E-03
60	GO:0030247: polysaccharide binding	5.20E-03
61	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	6.31E-03
62	GO:0004568: chitinase activity	7.90E-03
63	GO:0004864: protein phosphatase inhibitor activity	7.90E-03
64	GO:0050661: NADP binding	8.33E-03
65	GO:0004177: aminopeptidase activity	8.74E-03
66	GO:0031072: heat shock protein binding	1.05E-02
67	GO:0005509: calcium ion binding	1.13E-02
68	GO:0008266: poly(U) RNA binding	1.14E-02
69	GO:0046872: metal ion binding	1.19E-02
70	GO:0030552: cAMP binding	1.24E-02
71	GO:0004867: serine-type endopeptidase inhibitor activity	1.24E-02
72	GO:0030553: cGMP binding	1.24E-02
73	GO:0005217: intracellular ligand-gated ion channel activity	1.24E-02
74	GO:0004970: ionotropic glutamate receptor activity	1.24E-02
75	GO:0031418: L-ascorbic acid binding	1.44E-02
76	GO:0001046: core promoter sequence-specific DNA binding	1.44E-02
77	GO:0016301: kinase activity	1.50E-02
78	GO:0005216: ion channel activity	1.55E-02
79	GO:0016787: hydrolase activity	1.76E-02
80	GO:0015035: protein disulfide oxidoreductase activity	1.87E-02
81	GO:0016746: transferase activity, transferring acyl groups	1.87E-02
82	GO:0004871: signal transducer activity	1.92E-02
83	GO:0004499: N,N-dimethylaniline monooxygenase activity	1.99E-02
84	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	2.00E-02
85	GO:0047134: protein-disulfide reductase activity	2.11E-02
86	GO:0005249: voltage-gated potassium channel activity	2.23E-02
87	GO:0030551: cyclic nucleotide binding	2.23E-02
88	GO:0005451: monovalent cation:proton antiporter activity	2.23E-02
89	GO:0019825: oxygen binding	2.36E-02
90	GO:0004791: thioredoxin-disulfide reductase activity	2.47E-02
91	GO:0016853: isomerase activity	2.47E-02
92	GO:0015299: solute:proton antiporter activity	2.47E-02
93	GO:0050662: coenzyme binding	2.47E-02
94	GO:0030170: pyridoxal phosphate binding	2.53E-02
95	GO:0004872: receptor activity	2.60E-02
96	GO:0020037: heme binding	2.81E-02
97	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.99E-02
98	GO:0015385: sodium:proton antiporter activity	2.99E-02
99	GO:0008483: transaminase activity	3.27E-02
100	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	3.27E-02
101	GO:0004674: protein serine/threonine kinase activity	3.59E-02
102	GO:0005506: iron ion binding	3.86E-02
103	GO:0004683: calmodulin-dependent protein kinase activity	3.99E-02
104	GO:0005096: GTPase activator activity	4.44E-02
105	GO:0003824: catalytic activity	4.51E-02
106	GO:0004222: metalloendopeptidase activity	4.59E-02
107	GO:0050897: cobalt ion binding	4.75E-02

Rank	GO Term	Adjusted P value
1	GO:0019822: P4 peroxisome	0.00E+00
2	GO:0005794: Golgi apparatus	1.75E-05
3	GO:0045252: oxoglutarate dehydrogenase complex	2.75E-04
4	GO:0005950: anthranilate synthase complex	6.04E-04
5	GO:0016021: integral component of membrane	9.55E-04
6	GO:0030658: transport vesicle membrane	1.40E-03
7	GO:0005886: plasma membrane	2.14E-03
8	GO:0000813: ESCRT I complex	2.39E-03
9	GO:0000164: protein phosphatase type 1 complex	2.39E-03
10	GO:0005802: trans-Golgi network	2.53E-03
11	GO:0031965: nuclear membrane	2.86E-03
12	GO:0005788: endoplasmic reticulum lumen	4.67E-03
13	GO:0017119: Golgi transport complex	7.90E-03
14	GO:0031225: anchored component of membrane	8.25E-03
15	GO:0005789: endoplasmic reticulum membrane	9.20E-03
16	GO:0031012: extracellular matrix	1.05E-02
17	GO:0005768: endosome	1.08E-02
18	GO:0070469: respiratory chain	1.55E-02
19	GO:0009505: plant-type cell wall	1.91E-02
20	GO:0005743: mitochondrial inner membrane	2.15E-02
21	GO:0005618: cell wall	2.32E-02
22	GO:0005770: late endosome	2.35E-02
23	GO:0019898: extrinsic component of membrane	2.60E-02
24	GO:0009504: cell plate	2.60E-02
25	GO:0071944: cell periphery	2.99E-02
26	GO:0032580: Golgi cisterna membrane	3.13E-02
27	GO:0009705: plant-type vacuole membrane	3.14E-02
28	GO:0046658: anchored component of plasma membrane	4.15E-02