co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G06130

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0046486: glycerolipid metabolic process	0.00E+00
2	GO:0006907: pinocytosis	0.00E+00
3	GO:0006437: tyrosyl-tRNA aminoacylation	0.00E+00
4	GO:0045014: negative regulation of transcription by glucose	0.00E+00
5	GO:0000819: sister chromatid segregation	0.00E+00
6	GO:0070455: positive regulation of heme biosynthetic process	0.00E+00
7	GO:0044774: mitotic DNA integrity checkpoint	0.00E+00
8	GO:0009942: longitudinal axis specification	9.52E-05
9	GO:0010583: response to cyclopentenone	1.90E-04
10	GO:0010070: zygote asymmetric cell division	1.98E-04
11	GO:0051013: microtubule severing	1.98E-04
12	GO:0010726: positive regulation of hydrogen peroxide metabolic process	1.98E-04
13	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.14E-04
14	GO:0048829: root cap development	3.43E-04
15	GO:0061062: regulation of nematode larval development	4.43E-04
16	GO:0001736: establishment of planar polarity	4.43E-04
17	GO:0043039: tRNA aminoacylation	4.43E-04
18	GO:0010069: zygote asymmetric cytokinesis in embryo sac	4.43E-04
19	GO:0006650: glycerophospholipid metabolic process	4.43E-04
20	GO:0009825: multidimensional cell growth	6.52E-04
21	GO:0046168: glycerol-3-phosphate catabolic process	7.22E-04
22	GO:0010226: response to lithium ion	7.22E-04
23	GO:0009926: auxin polar transport	7.63E-04
24	GO:0006468: protein phosphorylation	8.42E-04
25	GO:0003333: amino acid transmembrane transport	9.64E-04
26	GO:0033014: tetrapyrrole biosynthetic process	1.03E-03
27	GO:0010321: regulation of vegetative phase change	1.03E-03
28	GO:0045017: glycerolipid biosynthetic process	1.03E-03
29	GO:0051513: regulation of monopolar cell growth	1.03E-03
30	GO:0007276: gamete generation	1.03E-03
31	GO:0006072: glycerol-3-phosphate metabolic process	1.03E-03
32	GO:0009734: auxin-activated signaling pathway	1.09E-03
33	GO:0042127: regulation of cell proliferation	1.24E-03
34	GO:0033500: carbohydrate homeostasis	1.37E-03
35	GO:0042991: transcription factor import into nucleus	1.37E-03
36	GO:0009956: radial pattern formation	1.37E-03
37	GO:0009958: positive gravitropism	1.56E-03
38	GO:0051726: regulation of cell cycle	1.85E-03
39	GO:0060918: auxin transport	2.14E-03
40	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	2.14E-03
41	GO:0010942: positive regulation of cell death	2.14E-03
42	GO:0048444: floral organ morphogenesis	2.57E-03
43	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	2.57E-03
44	GO:0010444: guard mother cell differentiation	3.03E-03
45	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	3.03E-03
46	GO:0000712: resolution of meiotic recombination intermediates	3.03E-03
47	GO:0009610: response to symbiotic fungus	3.03E-03
48	GO:1900056: negative regulation of leaf senescence	3.03E-03
49	GO:0000082: G1/S transition of mitotic cell cycle	3.03E-03
50	GO:0015995: chlorophyll biosynthetic process	3.24E-03
51	GO:0010492: maintenance of shoot apical meristem identity	3.51E-03
52	GO:0007389: pattern specification process	4.02E-03
53	GO:0009932: cell tip growth	4.02E-03
54	GO:0007186: G-protein coupled receptor signaling pathway	4.02E-03
55	GO:0010233: phloem transport	4.02E-03
56	GO:0006865: amino acid transport	4.34E-03
57	GO:0046916: cellular transition metal ion homeostasis	4.54E-03
58	GO:0006783: heme biosynthetic process	4.54E-03
59	GO:0048589: developmental growth	4.54E-03
60	GO:0009056: catabolic process	4.54E-03
61	GO:0006259: DNA metabolic process	5.67E-03
62	GO:0006782: protoporphyrinogen IX biosynthetic process	5.67E-03
63	GO:0019538: protein metabolic process	5.67E-03
64	GO:0009744: response to sucrose	5.85E-03
65	GO:0006265: DNA topological change	6.27E-03
66	GO:0009750: response to fructose	6.27E-03
67	GO:0048765: root hair cell differentiation	6.27E-03
68	GO:0008285: negative regulation of cell proliferation	6.27E-03
69	GO:0010152: pollen maturation	6.89E-03
70	GO:0006312: mitotic recombination	6.89E-03
71	GO:0009733: response to auxin	6.89E-03
72	GO:0009767: photosynthetic electron transport chain	7.52E-03
73	GO:0051301: cell division	7.69E-03
74	GO:0010207: photosystem II assembly	8.19E-03
75	GO:0009887: animal organ morphogenesis	8.19E-03
76	GO:0010540: basipetal auxin transport	8.19E-03
77	GO:0009934: regulation of meristem structural organization	8.19E-03
78	GO:0009933: meristem structural organization	8.19E-03
79	GO:0010053: root epidermal cell differentiation	8.87E-03
80	GO:0007010: cytoskeleton organization	1.03E-02
81	GO:0051302: regulation of cell division	1.10E-02
82	GO:0006418: tRNA aminoacylation for protein translation	1.10E-02
83	GO:0006874: cellular calcium ion homeostasis	1.10E-02
84	GO:0043622: cortical microtubule organization	1.10E-02
85	GO:0009624: response to nematode	1.12E-02
86	GO:0048364: root development	1.36E-02
87	GO:0010091: trichome branching	1.42E-02
88	GO:0048443: stamen development	1.42E-02
89	GO:0006284: base-excision repair	1.42E-02
90	GO:0000271: polysaccharide biosynthetic process	1.59E-02
91	GO:0000226: microtubule cytoskeleton organization	1.59E-02
92	GO:0009741: response to brassinosteroid	1.67E-02
93	GO:0045489: pectin biosynthetic process	1.67E-02
94	GO:0010305: leaf vascular tissue pattern formation	1.67E-02
95	GO:0007018: microtubule-based movement	1.76E-02
96	GO:0007059: chromosome segregation	1.76E-02
97	GO:0048825: cotyledon development	1.85E-02
98	GO:0009749: response to glucose	1.85E-02
99	GO:0008654: phospholipid biosynthetic process	1.85E-02
100	GO:0009791: post-embryonic development	1.85E-02
101	GO:0071554: cell wall organization or biogenesis	1.94E-02
102	GO:0002229: defense response to oomycetes	1.94E-02
103	GO:0019760: glucosinolate metabolic process	2.23E-02
104	GO:0010252: auxin homeostasis	2.23E-02
105	GO:0000910: cytokinesis	2.42E-02
106	GO:0016126: sterol biosynthetic process	2.53E-02
107	GO:0009627: systemic acquired resistance	2.73E-02
108	GO:0010411: xyloglucan metabolic process	2.84E-02
109	GO:0009658: chloroplast organization	3.02E-02
110	GO:0009832: plant-type cell wall biogenesis	3.16E-02
111	GO:0010311: lateral root formation	3.16E-02
112	GO:0006811: ion transport	3.27E-02
113	GO:0007049: cell cycle	3.37E-02
114	GO:0016051: carbohydrate biosynthetic process	3.61E-02
115	GO:0030001: metal ion transport	3.96E-02
116	GO:0006839: mitochondrial transport	3.96E-02
117	GO:0051707: response to other organism	4.32E-02
118	GO:0042546: cell wall biogenesis	4.45E-02
119	GO:0009965: leaf morphogenesis	4.70E-02

Rank	GO Term	Adjusted P value
1	GO:0047793: cycloeucalenol cycloisomerase activity	0.00E+00
2	GO:0010011: auxin binding	2.88E-05
3	GO:0010328: auxin influx transmembrane transporter activity	2.88E-05
4	GO:0008568: microtubule-severing ATPase activity	1.98E-04
5	GO:0004831: tyrosine-tRNA ligase activity	1.98E-04
6	GO:0005094: Rho GDP-dissociation inhibitor activity	4.43E-04
7	GO:0010296: prenylcysteine methylesterase activity	4.43E-04
8	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	4.43E-04
9	GO:0004109: coproporphyrinogen oxidase activity	4.43E-04
10	GO:0008805: carbon-monoxide oxygenase activity	4.43E-04
11	GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity	7.22E-04
12	GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity	1.03E-03
13	GO:0003916: DNA topoisomerase activity	1.03E-03
14	GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed	1.37E-03
15	GO:0043495: protein anchor	1.37E-03
16	GO:0004930: G-protein coupled receptor activity	1.37E-03
17	GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity	1.56E-03
18	GO:0008725: DNA-3-methyladenine glycosylase activity	1.74E-03
19	GO:0019901: protein kinase binding	1.79E-03
20	GO:0004672: protein kinase activity	3.32E-03
21	GO:0008017: microtubule binding	3.64E-03
22	GO:0005096: GTPase activator activity	3.77E-03
23	GO:0046914: transition metal ion binding	4.02E-03
24	GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity	4.02E-03
25	GO:0009672: auxin:proton symporter activity	5.10E-03
26	GO:0015293: symporter activity	6.57E-03
27	GO:0010329: auxin efflux transmembrane transporter activity	7.52E-03
28	GO:0016301: kinase activity	7.96E-03
29	GO:0015171: amino acid transmembrane transporter activity	8.73E-03
30	GO:0005217: intracellular ligand-gated ion channel activity	8.87E-03
31	GO:0004970: ionotropic glutamate receptor activity	8.87E-03
32	GO:0052689: carboxylic ester hydrolase activity	8.92E-03
33	GO:0005515: protein binding	1.02E-02
34	GO:0003779: actin binding	1.09E-02
35	GO:0008094: DNA-dependent ATPase activity	1.18E-02
36	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.26E-02
37	GO:0004674: protein serine/threonine kinase activity	1.33E-02
38	GO:0030570: pectate lyase activity	1.34E-02
39	GO:0004812: aminoacyl-tRNA ligase activity	1.50E-02
40	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	1.61E-02
41	GO:0001085: RNA polymerase II transcription factor binding	1.67E-02
42	GO:0016853: isomerase activity	1.76E-02
43	GO:0010181: FMN binding	1.76E-02
44	GO:0016762: xyloglucan:xyloglucosyl transferase activity	1.94E-02
45	GO:0016791: phosphatase activity	2.23E-02
46	GO:0016413: O-acetyltransferase activity	2.42E-02
47	GO:0016798: hydrolase activity, acting on glycosyl bonds	2.84E-02
48	GO:0008236: serine-type peptidase activity	2.94E-02
49	GO:0016788: hydrolase activity, acting on ester bonds	3.08E-02
50	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	3.27E-02
51	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	3.38E-02
52	GO:0005524: ATP binding	3.60E-02
53	GO:0004712: protein serine/threonine/tyrosine kinase activity	3.84E-02
54	GO:0051287: NAD binding	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0043224: nuclear SCF ubiquitin ligase complex	0.00E+00
2	GO:0009331: glycerol-3-phosphate dehydrogenase complex	1.03E-03
3	GO:0009531: secondary cell wall	1.03E-03
4	GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing)	1.37E-03
5	GO:0005874: microtubule	1.48E-03
6	GO:0000793: condensed chromosome	2.14E-03
7	GO:0009986: cell surface	3.03E-03
8	GO:0000794: condensed nuclear chromosome	3.03E-03
9	GO:0043234: protein complex	9.57E-03
10	GO:0016021: integral component of membrane	1.12E-02
11	GO:0005871: kinesin complex	1.50E-02
12	GO:0009570: chloroplast stroma	2.42E-02
13	GO:0005667: transcription factor complex	2.73E-02
14	GO:0009707: chloroplast outer membrane	3.05E-02
15	GO:0090406: pollen tube	4.32E-02