Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G06030

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0009735: response to cytokinin5.45E-06
2GO:0010115: regulation of abscisic acid biosynthetic process2.38E-05
3GO:0010270: photosystem II oxygen evolving complex assembly2.38E-05
4GO:0015995: chlorophyll biosynthetic process5.62E-05
5GO:0006461: protein complex assembly1.21E-04
6GO:0006014: D-ribose metabolic process1.52E-04
7GO:0006828: manganese ion transport1.52E-04
8GO:0009657: plastid organization2.91E-04
9GO:0006783: heme biosynthetic process3.29E-04
10GO:0006782: protoporphyrinogen IX biosynthetic process4.07E-04
11GO:0006816: calcium ion transport4.48E-04
12GO:0006412: translation4.92E-04
13GO:0010143: cutin biosynthetic process5.76E-04
14GO:0051017: actin filament bundle assembly7.11E-04
15GO:0000027: ribosomal large subunit assembly7.11E-04
16GO:0035428: hexose transmembrane transport8.54E-04
17GO:0006012: galactose metabolic process9.02E-04
18GO:0000413: protein peptidyl-prolyl isomerization1.05E-03
19GO:0046323: glucose import1.10E-03
20GO:0019252: starch biosynthetic process1.21E-03
21GO:0016051: carbohydrate biosynthetic process2.25E-03
22GO:0006457: protein folding2.31E-03
23GO:0046686: response to cadmium ion5.57E-03
24GO:0006633: fatty acid biosynthetic process5.65E-03
25GO:0009793: embryo development ending in seed dormancy8.27E-03
26GO:0042254: ribosome biogenesis8.27E-03
27GO:0006970: response to osmotic stress8.59E-03
28GO:0015979: photosynthesis1.04E-02
29GO:0045454: cell redox homeostasis1.08E-02
30GO:0006629: lipid metabolic process1.25E-02
31GO:0042742: defense response to bacterium3.10E-02
32GO:0009409: response to cold3.85E-02
33GO:0005975: carbohydrate metabolic process4.18E-02
RankGO TermAdjusted P value
1GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity0.00E+00
2GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity0.00E+00
3GO:0019843: rRNA binding7.52E-06
4GO:0047381: dodecanoyl-[acyl-carrier-protein] hydrolase activity8.86E-06
5GO:0004853: uroporphyrinogen decarboxylase activity8.86E-06
6GO:0016296: palmitoyl-[acyl-carrier-protein] hydrolase activity4.33E-05
7GO:0016295: myristoyl-[acyl-carrier-protein] hydrolase activity4.33E-05
8GO:0003735: structural constituent of ribosome1.00E-04
9GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.30E-04
10GO:0051920: peroxiredoxin activity1.85E-04
11GO:0004747: ribokinase activity1.85E-04
12GO:0016209: antioxidant activity2.54E-04
13GO:0004034: aldose 1-epimerase activity2.54E-04
14GO:0004033: aldo-keto reductase (NADP) activity2.54E-04
15GO:0008865: fructokinase activity2.54E-04
16GO:0047617: acyl-CoA hydrolase activity3.67E-04
17GO:0005384: manganese ion transmembrane transporter activity3.67E-04
18GO:0015095: magnesium ion transmembrane transporter activity5.33E-04
19GO:0005528: FK506 binding7.11E-04
20GO:0005102: receptor binding1.00E-03
21GO:0005355: glucose transmembrane transporter activity1.16E-03
22GO:0016853: isomerase activity1.16E-03
23GO:0051015: actin filament binding1.38E-03
24GO:0015144: carbohydrate transmembrane transporter activity5.46E-03
25GO:0005351: sugar:proton symporter activity5.93E-03
26GO:0004601: peroxidase activity8.16E-03
27GO:0016788: hydrolase activity, acting on ester bonds8.27E-03
28GO:0030246: carbohydrate binding2.32E-02
29GO:0003729: mRNA binding4.12E-02
RankGO TermAdjusted P value
1GO:0009570: chloroplast stroma2.71E-13
2GO:0009507: chloroplast1.17E-12
3GO:0009941: chloroplast envelope2.36E-12
4GO:0009579: thylakoid4.60E-09
5GO:0031977: thylakoid lumen1.41E-06
6GO:0009543: chloroplast thylakoid lumen7.52E-06
7GO:0009534: chloroplast thylakoid9.77E-06
8GO:0009535: chloroplast thylakoid membrane1.23E-04
9GO:0009533: chloroplast stromal thylakoid2.19E-04
10GO:0005840: ribosome4.22E-04
11GO:0030095: chloroplast photosystem II5.76E-04
12GO:0031969: chloroplast membrane7.17E-04
13GO:0022625: cytosolic large ribosomal subunit7.52E-04
14GO:0015629: actin cytoskeleton9.02E-04
15GO:0009523: photosystem II1.21E-03
16GO:0010319: stromule1.49E-03
17GO:0022626: cytosolic ribosome1.72E-03
18GO:0009707: chloroplast outer membrane1.92E-03
19GO:0048046: apoplast1.98E-03
20GO:0015934: large ribosomal subunit2.12E-03
21GO:0005856: cytoskeleton2.88E-03
22GO:0016020: membrane4.28E-03
23GO:0009505: plant-type cell wall3.64E-02
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Gene type



Gene DE type